; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027059 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027059
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description29 kDa ribonucleoprotein, chloroplastic
Genome locationchr10:44708721..44710707
RNA-Seq ExpressionLag0027059
SyntenyLag0027059
Gene Ontology termsGO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137828.1 29 kDa ribonucleoprotein, chloroplastic [Cucumis sativus]1.0e-11485.6Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNP-SSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNL
        M+ASA SLTL SLT KTLS SNPK KLFSLNP SS+RLLSNPISISSF+L S RVSPPF SRF+RNVAVSSDY QEE TL+ DGDDSSYAPDLKLFVGNL
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNP-SSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNL

Query:  PFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNL
        PF+VDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMS+  EVE AAQQFNGYEL+GR LRVNYGPPPPK+DD SF+GS+NAS+FDN NR++V NL
Subjt:  PFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNL

Query:  AWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV
        AWGVDDLTLENLFRE+GNV+EAKVVYDR+SGKSRGFGFVTYNSAEEVN AIQSLDGV
Subjt:  AWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV

XP_008442686.1 PREDICTED: 29 kDa ribonucleoprotein, chloroplastic [Cucumis melo]8.6e-11481.92Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP
        M+ASA SLTLSSLT KTLSLSNPK KLFSLNPSS   L NPISISSFVL S RVS PF SRF+RNVAVSSDYDQEE+TL+ADGDDS YAPDLKLFVGNLP
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP

Query:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA
        FSVDSAQLAGLFESAGQVERVEVIYDKTTG+SRGFGFVTMS+ DEVE AAQQFNGYEL+GRSLRVNYG PPPK+DD  F+GS+NAS+FDN NR++V NLA
Subjt:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA

Query:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV--LTTAFLLTESEDK
        WGVDDLTLENLFRE GNV+EAKVVYDR+SG+SRGFGFVTYNSAEEVNNAIQSL+GV  +  +  +T++E K
Subjt:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV--LTTAFLLTESEDK

XP_022935639.1 29 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata]1.9e-11383.98Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP
        MAASAT LTLSSLTPKTLS SNPK +LFSLNPSS+   SNPISIS+ VLRSDRVSP F SRF+RNVAVSSD+DQEE+ LD DGDDSSYAPDL+LFVGNLP
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP

Query:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA
        F++DSAQLAGLFESAGQVERVEVIYDK TGRSRGFGFVTMS+  E E AAQQFNGYELEGR LRVNYGPPPPK+DD SF+ SKNAS FDN N ++V NLA
Subjt:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA

Query:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV
        WGVDDLTLENLFREQGNVV+AKVVYDR+SG+SRGFGFVTY+SAEEVNNAIQSLDGV
Subjt:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV

XP_023538708.1 29 kDa ribonucleoprotein, chloroplastic-like [Cucurbita pepo subsp. pepo]4.3e-11383.98Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP
        MAASAT LTLSSLTPKTLS SNPK  LFSLNPSS+   SNPISIS+ VLRSDRVSP F SRF+RNVAVSSD+DQEE+ LD DGDDSSYAPDL+LFVGNLP
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP

Query:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA
        F++DSAQLAGLFESAGQVERVEVIYDK TGRSRGFGFVTMS+  E E AAQQFNGYELEGR LRVNYGPPPPK+DD SF+ SKNAS FDN N ++V NLA
Subjt:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA

Query:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV
        WGVDDLTLENLFREQGNVV+AKVVYDR+SG+SRGFGFVTY+SAEEVNNAIQSLDGV
Subjt:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV

XP_038905951.1 29 kDa ribonucleoprotein A, chloroplastic [Benincasa hispida]8.1e-12088.24Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP
        M+ASA SLTLS+LT KTLSLSNPKIKLFSLNPSS RLLSNP SISS VLRS RVSPPF SRF+RNVAVSSDYDQEE+TL+AD +++SYAPDLKLFVGNLP
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP

Query:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA
        FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSS DEVE AAQQFNGYEL+GRSLRVNYGPPPP++DD SF+GS+NAS+FDNPNR++V NLA
Subjt:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA

Query:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDG
        WGVDDLTLENLFRE GNVVEAKVVYDRESGKSRGFGFVT+NSAEEVNNAIQSLDG
Subjt:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDG

TrEMBL top hitse value%identityAlignment
A0A0A0LAY6 Uncharacterized protein4.9e-11585.6Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNP-SSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNL
        M+ASA SLTL SLT KTLS SNPK KLFSLNP SS+RLLSNPISISSF+L S RVSPPF SRF+RNVAVSSDY QEE TL+ DGDDSSYAPDLKLFVGNL
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNP-SSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNL

Query:  PFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNL
        PF+VDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMS+  EVE AAQQFNGYEL+GR LRVNYGPPPPK+DD SF+GS+NAS+FDN NR++V NL
Subjt:  PFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNL

Query:  AWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV
        AWGVDDLTLENLFRE+GNV+EAKVVYDR+SGKSRGFGFVTYNSAEEVN AIQSLDGV
Subjt:  AWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV

A0A1S3B5S7 29 kDa ribonucleoprotein, chloroplastic4.2e-11481.92Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP
        M+ASA SLTLSSLT KTLSLSNPK KLFSLNPSS   L NPISISSFVL S RVS PF SRF+RNVAVSSDYDQEE+TL+ADGDDS YAPDLKLFVGNLP
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP

Query:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA
        FSVDSAQLAGLFESAGQVERVEVIYDKTTG+SRGFGFVTMS+ DEVE AAQQFNGYEL+GRSLRVNYG PPPK+DD  F+GS+NAS+FDN NR++V NLA
Subjt:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA

Query:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV--LTTAFLLTESEDK
        WGVDDLTLENLFRE GNV+EAKVVYDR+SG+SRGFGFVTYNSAEEVNNAIQSL+GV  +  +  +T++E K
Subjt:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV--LTTAFLLTESEDK

A0A5A7TQA3 29 kDa ribonucleoprotein4.2e-11481.92Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP
        M+ASA SLTLSSLT KTLSLSNPK KLFSLNPSS   L NPISISSFVL S RVS PF SRF+RNVAVSSDYDQEE+TL+ADGDDS YAPDLKLFVGNLP
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP

Query:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA
        FSVDSAQLAGLFESAGQVERVEVIYDKTTG+SRGFGFVTMS+ DEVE AAQQFNGYEL+GRSLRVNYG PPPK+DD  F+GS+NAS+FDN NR++V NLA
Subjt:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA

Query:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV--LTTAFLLTESEDK
        WGVDDLTLENLFRE GNV+EAKVVYDR+SG+SRGFGFVTYNSAEEVNNAIQSL+GV  +  +  +T++E K
Subjt:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV--LTTAFLLTESEDK

A0A6J1CU52 29 kDa ribonucleoprotein A, chloroplastic-like3.3e-11182.03Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP
        M ASATSL LSSLTPKTLSLSNP+IKLFSLNPSS+RLLSN ISIS+F +RSDR SP F SRF+RNVAVSSD+DQEE+ L+  GDD SYA DLKLFVGNLP
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP

Query:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA
        FSVDSAQLAGLFESAG+VERVEVIYDKTTGRSRGFGFVTMS+AD VE AA+QFNGYEL+GR+LRVNYGPPPPKKD+FSF GS+NAS F NPNRI+V NLA
Subjt:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA

Query:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV
        WGVDD  L NLFRE GNVVEAKVV DR+SG+SRGFGFVTY+SA EVNNAI++L+GV
Subjt:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV

A0A6J1F601 29 kDa ribonucleoprotein, chloroplastic-like9.3e-11483.98Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP
        MAASAT LTLSSLTPKTLS SNPK +LFSLNPSS+   SNPISIS+ VLRSDRVSP F SRF+RNVAVSSD+DQEE+ LD DGDDSSYAPDL+LFVGNLP
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLP

Query:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA
        F++DSAQLAGLFESAGQVERVEVIYDK TGRSRGFGFVTMS+  E E AAQQFNGYELEGR LRVNYGPPPPK+DD SF+ SKNAS FDN N ++V NLA
Subjt:  FSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLA

Query:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV
        WGVDDLTLENLFREQGNVV+AKVVYDR+SG+SRGFGFVTY+SAEEVNNAIQSLDGV
Subjt:  WGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV

SwissProt top hitse value%identityAlignment
P49313 30 kDa ribonucleoprotein, chloroplastic2.8e-7560.29Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNP-----KIKLFSLNPSSLRL-LSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDAD---GDDSSYAPD
        MA+SA+SL   SLTP+TL L  P      +  FSL PSSL L LS+P S              F SRF+R V +  D+DQ E+  D D    ++ +++PD
Subjt:  MAASATSLTLSSLTPKTLSLSNP-----KIKLFSLNPSSLRL-LSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDAD---GDDSSYAPD

Query:  LKLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFK-------GSKN
        LK+FVGNL FS DSA LA LFE AG VE VEVIYDK TGRSRGFGFVTMSS +EVE A QQFNGYEL+GR+LRVN GPPP K+++ SF+       GS+ 
Subjt:  LKLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFK-------GSKN

Query:  ASKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV
           FD+ NR+YVGNLAWGVD   LE LF EQG VV+AKVVYDR+SG+SRGFGFVTY+SAEEVNNAI+SLDGV
Subjt:  ASKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV

P49314 31 kDa ribonucleoprotein, chloroplastic3.7e-6753.57Show/hide
Query:  MAASATS----LTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFV
        MA+S+ S    L ++S TP +L   N  +  FSL  SSL L     S+SS  +       PF S F   VA+ SD+DQ E+ ++   +   ++ DLKLFV
Subjt:  MAASATS----LTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFV

Query:  GNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNAS----------
        GNLPFSVDSA LAGLFE AG VE VEVIYDK +GRSRGFGFVTMS+ +EVE A QQFNGYE++GR++RVN GP P K+++ SF G +  +          
Subjt:  GNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNAS----------

Query:  ----------KFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV
                    D+ NR+YVGNL+WGVDDL L+ LF EQGNVV+AKVVYDR+SG+SRGFGFVTY+SA+EVN+AI SL+G+
Subjt:  ----------KFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV

Q08935 29 kDa ribonucleoprotein A, chloroplastic1.0e-7762.64Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNP-----KIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADG---DDSSYAPDL
        MA+SA+SL   SLTP+TL L  P      +  FSL PSSL L     S+SS        S  F SRF+R V + SD+DQ E+  D D    ++ +++PDL
Subjt:  MAASATSLTLSSLTPKTLSLSNP-----KIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADG---DDSSYAPDL

Query:  KLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFK-GSKNASKFDNP
        K+FVGNLPFS DSA LA LFE AG VE VEVIYDK TGRSRGFGFVTMSS +EVE A QQFNGYEL+GR+LRVN GPPP K+++ SF+ GS+    FD+ 
Subjt:  KLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFK-GSKNASKFDNP

Query:  NRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV
        NR+YVGNLAWGVD   LE LF EQG VV+AKVVYDR+SG+SRGFGFVTY+SAEEVNNAI+SLDGV
Subjt:  NRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGV

Q43349 29 kDa ribonucleoprotein, chloroplastic8.8e-6950.46Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRL-LSNPISISSFVLRSDRVSPP--FPSRFLRNVAVSSDYDQEEETLDADGDDS------SYAPD
        M+ASA+S  LS+  PK+L L   +    S+ P SL   L +   +S F   + + S P  +PSRF+RNVAVSSD++ EE+ + ADGDDS      S++PD
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRL-LSNPISISSFVLRSDRVSPP--FPSRFLRNVAVSSDYDQEEETLDADGDDS------SYAPD

Query:  LKLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSF------------
        LKLFVGNL F+VDSAQLA LFESAG VE VEVIYDK TGRSRGFGFVTMS+A EVE AAQQFNGYE EGR LRVN GPPPPK+++ SF            
Subjt:  LKLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSF------------

Query:  -----------------------------------------------KGSKNASKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKS
                                                        GS + S   + NR+YVGNL+WGVDD+ LENLF EQG VVEA+V+YDR+SG+S
Subjt:  -----------------------------------------------KGSKNASKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKS

Query:  RGFGFVTYNSAEEVNNAIQSLDG
        +GFGFVT +S++EV  AI SL+G
Subjt:  RGFGFVTYNSAEEVNNAIQSLDG

Q9ZUU4 RNA-binding protein CP29B, chloroplastic1.3e-7258.15Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLD--ADGDDSSYAPDLKLFVGN
        MAASA+SL LSS  PK+L     +    SL   SL    N  S+ SF + +   SP   SRF RNVA++S+++ EE+     A   + S++ DLKLFVGN
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLD--ADGDDSSYAPDLKLFVGN

Query:  LPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNA-------------
        LPF+VDSAQLA LFESAG VE VEVIYDK TGRSRGFGFVTMSS  EVE AAQQFNGYEL+GR LRVN GPPPPK++D   +G +++             
Subjt:  LPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNA-------------

Query:  SKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDG
        S   + NR+YVGNL+WGVDD+ LE+LF EQG VVEA+V+YDR+SG+S+GFGFVTY+S++EV NAI+SLDG
Subjt:  SKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDG

Arabidopsis top hitse value%identityAlignment
AT2G37220.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.3e-7458.15Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLD--ADGDDSSYAPDLKLFVGN
        MAASA+SL LSS  PK+L     +    SL   SL    N  S+ SF + +   SP   SRF RNVA++S+++ EE+     A   + S++ DLKLFVGN
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLD--ADGDDSSYAPDLKLFVGN

Query:  LPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNA-------------
        LPF+VDSAQLA LFESAG VE VEVIYDK TGRSRGFGFVTMSS  EVE AAQQFNGYEL+GR LRVN GPPPPK++D   +G +++             
Subjt:  LPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNA-------------

Query:  SKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDG
        S   + NR+YVGNL+WGVDD+ LE+LF EQG VVEA+V+YDR+SG+S+GFGFVTY+S++EV NAI+SLDG
Subjt:  SKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDG

AT3G53460.1 chloroplast RNA-binding protein 296.3e-7050.46Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRL-LSNPISISSFVLRSDRVSPP--FPSRFLRNVAVSSDYDQEEETLDADGDDS------SYAPD
        M+ASA+S  LS+  PK+L L   +    S+ P SL   L +   +S F   + + S P  +PSRF+RNVAVSSD++ EE+ + ADGDDS      S++PD
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRL-LSNPISISSFVLRSDRVSPP--FPSRFLRNVAVSSDYDQEEETLDADGDDS------SYAPD

Query:  LKLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSF------------
        LKLFVGNL F+VDSAQLA LFESAG VE VEVIYDK TGRSRGFGFVTMS+A EVE AAQQFNGYE EGR LRVN GPPPPK+++ SF            
Subjt:  LKLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSF------------

Query:  -----------------------------------------------KGSKNASKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKS
                                                        GS + S   + NR+YVGNL+WGVDD+ LENLF EQG VVEA+V+YDR+SG+S
Subjt:  -----------------------------------------------KGSKNASKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKS

Query:  RGFGFVTYNSAEEVNNAIQSLDG
        +GFGFVT +S++EV  AI SL+G
Subjt:  RGFGFVTYNSAEEVNNAIQSLDG

AT3G53460.2 chloroplast RNA-binding protein 296.3e-7050.46Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRL-LSNPISISSFVLRSDRVSPP--FPSRFLRNVAVSSDYDQEEETLDADGDDS------SYAPD
        M+ASA+S  LS+  PK+L L   +    S+ P SL   L +   +S F   + + S P  +PSRF+RNVAVSSD++ EE+ + ADGDDS      S++PD
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRL-LSNPISISSFVLRSDRVSPP--FPSRFLRNVAVSSDYDQEEETLDADGDDS------SYAPD

Query:  LKLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSF------------
        LKLFVGNL F+VDSAQLA LFESAG VE VEVIYDK TGRSRGFGFVTMS+A EVE AAQQFNGYE EGR LRVN GPPPPK+++ SF            
Subjt:  LKLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSF------------

Query:  -----------------------------------------------KGSKNASKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKS
                                                        GS + S   + NR+YVGNL+WGVDD+ LENLF EQG VVEA+V+YDR+SG+S
Subjt:  -----------------------------------------------KGSKNASKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKS

Query:  RGFGFVTYNSAEEVNNAIQSLDG
        +GFGFVT +S++EV  AI SL+G
Subjt:  RGFGFVTYNSAEEVNNAIQSLDG

AT3G53460.3 chloroplast RNA-binding protein 296.3e-7050.46Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRL-LSNPISISSFVLRSDRVSPP--FPSRFLRNVAVSSDYDQEEETLDADGDDS------SYAPD
        M+ASA+S  LS+  PK+L L   +    S+ P SL   L +   +S F   + + S P  +PSRF+RNVAVSSD++ EE+ + ADGDDS      S++PD
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRL-LSNPISISSFVLRSDRVSPP--FPSRFLRNVAVSSDYDQEEETLDADGDDS------SYAPD

Query:  LKLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSF------------
        LKLFVGNL F+VDSAQLA LFESAG VE VEVIYDK TGRSRGFGFVTMS+A EVE AAQQFNGYE EGR LRVN GPPPPK+++ SF            
Subjt:  LKLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSF------------

Query:  -----------------------------------------------KGSKNASKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKS
                                                        GS + S   + NR+YVGNL+WGVDD+ LENLF EQG VVEA+V+YDR+SG+S
Subjt:  -----------------------------------------------KGSKNASKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVEAKVVYDRESGKS

Query:  RGFGFVTYNSAEEVNNAIQSLDG
        +GFGFVT +S++EV  AI SL+G
Subjt:  RGFGFVTYNSAEEVNNAIQSLDG

AT3G53460.4 chloroplast RNA-binding protein 293.2e-6647.38Show/hide
Query:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRL-LSNPISISSFVLRSDRVSPP--FPSRFLRNVAVSSDYDQEEETLDADGDDS------SYAPD
        M+ASA+S  LS+  PK+L L   +    S+ P SL   L +   +S F   + + S P  +PSRF+RNVAVSSD++ EE+ + ADGDDS      S++PD
Subjt:  MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRL-LSNPISISSFVLRSDRVSPP--FPSRFLRNVAVSSDYDQEEETLDADGDDS------SYAPD

Query:  LKLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGY---------------------ELEGRSLRVNYGPP
        LKLFVGNL F+VDSAQLA LFESAG VE VEVIYDK TGRSRGFGFVTMS+A EVE AAQQFNGY                     E EGR LRVN GPP
Subjt:  LKLFVGNLPFSVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGY---------------------ELEGRSLRVNYGPP

Query:  PPKKDDFSF-----------------------------------------------------------KGSKNASKFDNPNRIYVGNLAWGVDDLTLENL
        PPK+++ SF                                                            GS + S   + NR+YVGNL+WGVDD+ LENL
Subjt:  PPKKDDFSF-----------------------------------------------------------KGSKNASKFDNPNRIYVGNLAWGVDDLTLENL

Query:  FREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDG
        F EQG VVEA+V+YDR+SG+S+GFGFVT +S++EV  AI SL+G
Subjt:  FREQGNVVEAKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTCTGCGACTTCCTTAACGCTCTCATCCCTAACCCCCAAAACCCTATCCCTTTCTAACCCTAAAATCAAACTCTTCTCTCTCAATCCTTCTTCCCTTCGCCT
TCTCTCCAATCCCATTTCCATTTCCTCTTTCGTTCTTCGTTCCGATAGGGTTTCTCCACCCTTCCCCTCTCGCTTCCTCAGAAATGTCGCCGTCTCCTCCGATTACGACC
AGGAGGAAGAAACCCTCGACGCCGATGGAGACGACTCTTCCTACGCTCCCGACCTCAAACTCTTCGTCGGAAATCTTCCCTTCAGCGTCGACAGTGCTCAACTCGCCGGC
TTGTTCGAAAGCGCCGGACAAGTTGAGAGGGTCGAGGTGATTTACGACAAGACGACGGGACGAAGCAGGGGATTTGGTTTTGTCACAATGTCGAGTGCTGATGAGGTTGA
AGTAGCTGCTCAACAATTTAATGGCTATGAACTCGAGGGTCGGTCTCTGAGGGTAAATTATGGACCCCCTCCACCAAAAAAGGATGATTTCTCTTTCAAAGGTTCCAAAA
ATGCTTCAAAATTTGATAACCCCAACCGTATTTATGTGGGCAACCTTGCTTGGGGTGTTGATGATCTTACACTCGAGAACTTGTTTAGGGAACAAGGAAATGTTGTGGAG
GCAAAAGTAGTTTATGACCGTGAGAGCGGAAAATCTAGGGGCTTTGGTTTCGTAACATATAATTCAGCAGAGGAAGTTAACAATGCCATTCAGTCCTTGGATGGAGTTCT
AACCACCGCATTCTTGCTTACTGAATCAGAAGATAAATGGCATCAGCTACCAAGACTTGAATGGAAGATCCATCCGAGTAACACAAGCAGAAGCAAGGCCGGCAAGGCGC
CCGTTTTGAGTATCAGAAGCTTTTATCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCTCTGCGACTTCCTTAACGCTCTCATCCCTAACCCCCAAAACCCTATCCCTTTCTAACCCTAAAATCAAACTCTTCTCTCTCAATCCTTCTTCCCTTCGCCT
TCTCTCCAATCCCATTTCCATTTCCTCTTTCGTTCTTCGTTCCGATAGGGTTTCTCCACCCTTCCCCTCTCGCTTCCTCAGAAATGTCGCCGTCTCCTCCGATTACGACC
AGGAGGAAGAAACCCTCGACGCCGATGGAGACGACTCTTCCTACGCTCCCGACCTCAAACTCTTCGTCGGAAATCTTCCCTTCAGCGTCGACAGTGCTCAACTCGCCGGC
TTGTTCGAAAGCGCCGGACAAGTTGAGAGGGTCGAGGTGATTTACGACAAGACGACGGGACGAAGCAGGGGATTTGGTTTTGTCACAATGTCGAGTGCTGATGAGGTTGA
AGTAGCTGCTCAACAATTTAATGGCTATGAACTCGAGGGTCGGTCTCTGAGGGTAAATTATGGACCCCCTCCACCAAAAAAGGATGATTTCTCTTTCAAAGGTTCCAAAA
ATGCTTCAAAATTTGATAACCCCAACCGTATTTATGTGGGCAACCTTGCTTGGGGTGTTGATGATCTTACACTCGAGAACTTGTTTAGGGAACAAGGAAATGTTGTGGAG
GCAAAAGTAGTTTATGACCGTGAGAGCGGAAAATCTAGGGGCTTTGGTTTCGTAACATATAATTCAGCAGAGGAAGTTAACAATGCCATTCAGTCCTTGGATGGAGTTCT
AACCACCGCATTCTTGCTTACTGAATCAGAAGATAAATGGCATCAGCTACCAAGACTTGAATGGAAGATCCATCCGAGTAACACAAGCAGAAGCAAGGCCGGCAAGGCGC
CCGTTTTGAGTATCAGAAGCTTTTATCTATAA
Protein sequenceShow/hide protein sequence
MAASATSLTLSSLTPKTLSLSNPKIKLFSLNPSSLRLLSNPISISSFVLRSDRVSPPFPSRFLRNVAVSSDYDQEEETLDADGDDSSYAPDLKLFVGNLPFSVDSAQLAG
LFESAGQVERVEVIYDKTTGRSRGFGFVTMSSADEVEVAAQQFNGYELEGRSLRVNYGPPPPKKDDFSFKGSKNASKFDNPNRIYVGNLAWGVDDLTLENLFREQGNVVE
AKVVYDRESGKSRGFGFVTYNSAEEVNNAIQSLDGVLTTAFLLTESEDKWHQLPRLEWKIHPSNTSRSKAGKAPVLSIRSFYL