CuGenDBv2

Gene ID	Lag0027085
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	ribonuclease P protein subunit p29
Genome location	chr10:44923736..44926866
RNA-Seq Expression	Lag0027085
Synteny	Lag0027085
Gene Ontology terms	GO:0001682 - tRNA 5'-leader removal (biological process) GO:0006364 - rRNA processing (biological process) GO:0090501 - RNA phosphodiester bond hydrolysis (biological process) GO:0000172 - ribonuclease MRP complex (cellular component) GO:0005634 - nucleus (cellular component) GO:0030677 - ribonuclease P complex (cellular component) GO:0033204 - ribonuclease P RNA binding (molecular function)
InterPro domains	IPR002730 - Ribonuclease P protein subunit Rpp29/RNP1 IPR016848 - Ribonuclease P/MRP subunit Rpp29 IPR023534 - Rof/RNase P-like IPR036980 - Ribonuclease P/MRP subunit Rpp29 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6580591.1 Beta-1,4-xylosyltransferase IRX9, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-124

80.47

Show/hide

Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL
        MA    SQDLRKHALEALERRCAAAK ELLQQQKK  STE+LKKE K KA L+DSSS VVS NQYDSSILL S  KP NKDV ESDPIYF+LSAAVNENL
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL

Query:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM
        M+TNMD                        S+ELKVDAWILLDNFVPK AGM+GSR RAL+SNSKRSKRHMSMKQHKKCGT DLPSDFHKFEIFWPMHDM
Subjt:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM

Query:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
        WKSYMKQRL HVG D LARNLL+ADLHGAMILVVECKIPAFTGISGIMIRETAETFGI TKD+KFRVVPKKSSVFIFQWDCWK+TLLGDKLSSRIPS
Subjt:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS

KAG7017346.1 Ribonuclease P protein subunit p29, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.2e-124

80.47

Show/hide

Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL
        MA    SQDLRKHALEALERRCAAAK ELLQQQKK  STE+LKKE K KA L+DSSS VVS NQYDSSILL S  KP NKDV ESDPIYF+LSAAVNENL
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL

Query:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM
        M+TNMD                        S+ELKVDAWILLDNFVPK AGM+GSR RAL+SNSKRSKRHMSMKQHKKCGT DLPSDFHKFEIFWPMHDM
Subjt:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM

Query:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
        WKSYMKQRL HVG D LARNLL+ADLHGAMILVVECKIPAFTGISGIMIRETAETFGI TKD+KFRVVPKKSSVFIFQWDCWK+TLLGDKLSSRIPS
Subjt:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS

XP_022983897.1 uncharacterized protein LOC111482383 [Cucurbita maxima]

4.9e-124

80.47

Show/hide

Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL
        MA    SQDLRKHALEALERRCAAAK ELLQQQKK  STE+LKKE K KA L+DSSS VVS NQYDSSILL S  KP NKDV ESDPIYF+LSAAVNENL
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL

Query:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM
        M+TNMD                        S+ELKVDAWILLDNFVPK AG +GSR RAL+SNSKRSKRHMSMKQHKKCGT DLPSDFHKFEIFWPMHDM
Subjt:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM

Query:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
        WKSYMKQRL HVG D LARNLL+ADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSS FIFQWDCWK+TLLGDKLSSRIPS
Subjt:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS

XP_023526523.1 ribonuclease P protein subunit p29 [Cucurbita pepo subsp. pepo]

7.6e-125

80.81

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Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL
        MA    SQDLRKHALEALERRCAAAK ELLQQQKK  STE+LKKE K KA L+DSSS VVS N YDSSILL S  KP NKDV ESDPIYF+LSAAVNENL
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL

Query:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM
        M+TNMD                        S+ELKVDAWILLDNFVPK AGM+GSR RAL+SNSKRSKRHMSMKQHKKCGT DLPSDFHKFEIFWPMHDM
Subjt:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM

Query:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
        WKSYMKQRL HVG D LARNLL+ADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWK+TLLGDKLSSRIPS
Subjt:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS

XP_038906079.1 ribonuclease P protein subunit p29 isoform X3 [Benincasa hispida]

2.2e-124

81.48

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Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL
        MAD K SQDLRKHALEALERRCAAAK ELLQQQKKI+STE+LKKE+K K+ L+DS S VVSRNQYDSSILL S  KPP+KDV ESDPIYF+LSAAVNE L
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL

Query:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM
        MAT MD                        SKE KVDA ILLDNFVPK AGM+GSR RALRSNSKRSKRHMSM+QHKKCGT DLPSDFHKFEIFWPMHDM
Subjt:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM

Query:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
        WKSYMKQRLHHVG DALARNLLIADLHGAMI VVEC+IPAFTG SGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
Subjt:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B6Y6 uncharacterized protein LOC103486457 isoform X2

2.0e-118

78.79

Show/hide

Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL
        M+D K SQDLRKHALEALERRCAAAK ELLQQQ KI+STE+ KKE+K K++L+D +S VVSRNQY+SSI L S  KPPNKDV ESDPIYF+LSAAVNE L
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL

Query:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM
        MA++MD                        SKELKVDA ILLDNFVPK AGM+GSRMR LRS SKRSKRHMSMKQHKKCGT DLPSD HK+EIFWPMHDM
Subjt:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM

Query:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
        WKSYMKQRLH+VG DALARNLLIADLHGAMI VVECKIPAFTG SG+MIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
Subjt:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS

A0A5A7TR23 Ribonuclease P protein subunit p29 isoform X1

2.0e-118

78.79

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Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL
        M+D K SQDLRKHALEALERRCAAAK ELLQQQ KI+STE+ KKE+K K++L+D +S VVSRNQY+SSI L S  KPPNKDV ESDPIYF+LSAAVNE L
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL

Query:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM
        MA++MD                        SKELKVDA ILLDNFVPK AGM+GSRMR LRS SKRSKRHMSMKQHKKCGT DLPSD HK+EIFWPMHDM
Subjt:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM

Query:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
        WKSYMKQRLH+VG DALARNLLIADLHGAMI VVECKIPAFTG SG+MIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
Subjt:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS

A0A5D3DP72 Ribonuclease P protein subunit p29 isoform X1

8.8e-119

79.12

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Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL
        M+D K SQDLRKHALEALERRCAAAK ELLQQQ KI+STE+ KKE+K K+AL+D +S VVSRNQY+SSI L S  KPPNKDV ESDPIYF+LSAAVNE L
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL

Query:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM
        MA++MD                        SKELKVDA ILLDNFVPK AGM+GSRMR LRS SKRSKRHMSMKQHKKCGT DLPSD HK+EIFWPMHDM
Subjt:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM

Query:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
        WKSYMKQRLH+VG DALARNLLIADLHGAMI VVECKIPAFTG SG+MIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
Subjt:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS

A0A6J1F2W6 ribonuclease P protein subunit p29

2.2e-122

79.46

Show/hide

Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL
        MA    SQDLRKHALEALERRCAAAK ELLQQQKK  STE+LKKE K KA L+DSSS VVS NQYDSSILL S  KP NKDV ESDPIYF+LSAAVNENL
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL

Query:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM
        M TNMD                        S+ELKVDAWILLDNFVPK A M+GSR RAL+S+SKRSKRHMSMKQHKKCGT DLPSDFHKFEIFWPMHDM
Subjt:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM

Query:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
        WKSYMKQRL HVG D LARNLL+ DLHGAMILVVECKIPAFTGISGIMIRETAETFGI TKD+KFRVVPKKSSVFIFQWDCWK+TLLGDKLSSRIPS
Subjt:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS

A0A6J1J0L0 uncharacterized protein LOC111482383

2.4e-124

80.47

Show/hide

Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL
        MA    SQDLRKHALEALERRCAAAK ELLQQQKK  STE+LKKE K KA L+DSSS VVS NQYDSSILL S  KP NKDV ESDPIYF+LSAAVNENL
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENL

Query:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM
        M+TNMD                        S+ELKVDAWILLDNFVPK AG +GSR RAL+SNSKRSKRHMSMKQHKKCGT DLPSDFHKFEIFWPMHDM
Subjt:  MATNMD-----------------------WSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDM

Query:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS
        WKSYMKQRL HVG D LARNLL+ADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSS FIFQWDCWK+TLLGDKLSSRIPS
Subjt:  WKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPS

SwissProt top hits

e value

%identity

Alignment

O95707 Ribonuclease P protein subunit p29

8.4e-18

31.91

Show/hide

Query:  RALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVGQDA----LARNLLIADLHGAMILVVECKIPAFTGISGIMIRETA
        R  R   K+  + +S +Q ++    D+  +  ++ +F P+H++WK Y++     +  D     +   LL ADLHGA+I V + K P++ GI+GI+++ET 
Subjt:  RALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVGQDA----LARNLLIADLHGAMILVVECKIPAFTGISGIMIRETA

Query:  ETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR
          F I+TK+D+ +V+PK + VF  + D +   + G K   R
Subjt:  ETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR

Q2KIB9 Ribonuclease P protein subunit p29

2.4e-17

27.39

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Query:  LDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVGQDA----LARNLLIADLHGAMILVVECK
        L++ + + A ++       +   ++  + +S KQ ++    D+  +  ++ +F P+H++WK Y++   + +  D     +   LL ADLHGA++ V + K
Subjt:  LDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVGQDA----LARNLLIADLHGAMILVVECK

Query:  IPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR
         P++ G++GI+++ET   F I+TK+D+ +V+PK + VF  + D +   + G K   R
Subjt:  IPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR

Q5M882 Ribonuclease P protein subunit p29

4.9e-18

32.09

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Query:  KRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVGQDA----LARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVT
        K+  + +S KQ ++    D+  +  ++ +F P+H++WK Y++   + +  D     +   LL ADLHGA+I V + K P++ G++GI+++ET   F I+T
Subjt:  KRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVGQDA----LARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVT

Query:  KDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR
        K+D  +V+PK++ VF  + D +   + G K   R
Subjt:  KDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR

Q5R7B0 Ribonuclease P protein subunit p29

6.4e-18

31.91

Show/hide

Query:  RALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVGQDA----LARNLLIADLHGAMILVVECKIPAFTGISGIMIRETA
        R  R   K+  + +S +Q ++    D+  +  ++ +F P+H++WK Y++   + +  D     +   LL ADLHGA+I V + K P++ GI+GI+++ET 
Subjt:  RALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVGQDA----LARNLLIADLHGAMILVVECKIPAFTGISGIMIRETA

Query:  ETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR
          F I+TK+D+ +V+PK + VF  + D +   + G K   R
Subjt:  ETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR

Q9ZW76 Ribonuclease MRP protein subunit POP4

2.3e-55

45.03

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Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDP---IYFSLSAAVN
        M    V  D  + A+ A+ERR A AKA+LLQQQ++ N         K K   SD    +   +Q DS   L +  K   K V+  D     Y  LS  V+
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDP---IYFSLSAAVN

Query:  ENLMATNMDWS----------------------------KELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFE
        ENL+ATN+ +S                            K +K+D +ILLDNFV   +   GS+ +A + +SKRSK  MSMK+ KK G L +P D  KF+
Subjt:  ENLMATNMDWS----------------------------KELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFE

Query:  IFWPMHDMWKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLS
        +F PMH MW+SYM + +   G+  L+  LL ADLHGA + V ECKI +FTG+ GIM+RET+ETFGI+T+DDKFRVVPKK SVFI Q DCWK+TL GDK  
Subjt:  IFWPMHDMWKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLS

Query:  SR
        SR
Subjt:  SR

Arabidopsis top hits

e value

%identity

Alignment

AT2G43190.1 ribonuclease P family protein

1.6e-56

45.03

Show/hide

Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDP---IYFSLSAAVN
        M    V  D  + A+ A+ERR A AKA+LLQQQ++ N         K K   SD    +   +Q DS   L +  K   K V+  D     Y  LS  V+
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDP---IYFSLSAAVN

Query:  ENLMATNMDWS----------------------------KELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFE
        ENL+ATN+ +S                            K +K+D +ILLDNFV   +   GS+ +A + +SKRSK  MSMK+ KK G L +P D  KF+
Subjt:  ENLMATNMDWS----------------------------KELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFE

Query:  IFWPMHDMWKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLS
        +F PMH MW+SYM + +   G+  L+  LL ADLHGA + V ECKI +FTG+ GIM+RET+ETFGI+T+DDKFRVVPKK SVFI Q DCWK+TL GDK  
Subjt:  IFWPMHDMWKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLS

Query:  SR
        SR
Subjt:  SR

AT2G43190.2 ribonuclease P family protein

5.5e-57

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Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPI-YFSLSAAVNEN
        M    V  D  + A+ A+ERR A AKA+LLQQQ++ N         K K   SD    +   +Q DS  L    +    KD ++ D + Y  LS  V+EN
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPI-YFSLSAAVNEN

Query:  LMATNMDWS----------------------------KELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIF
        L+ATN+ +S                            K +K+D +ILLDNFV   +   GS+ +A + +SKRSK  MSMK+ KK G L +P D  KF++F
Subjt:  LMATNMDWS----------------------------KELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIF

Query:  WPMHDMWKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR
         PMH MW+SYM + +   G+  L+  LL ADLHGA + V ECKI +FTG+ GIM+RET+ETFGI+T+DDKFRVVPKK SVFI Q DCWK+TL GDK  SR
Subjt:  WPMHDMWKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR

AT2G43190.3 ribonuclease P family protein

5.5e-57

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Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPI-YFSLSAAVNEN
        M    V  D  + A+ A+ERR A AKA+LLQQQ++ N         K K   SD    +   +Q DS  L    +    KD ++ D + Y  LS  V+EN
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPI-YFSLSAAVNEN

Query:  LMATNMDWS----------------------------KELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIF
        L+ATN+ +S                            K +K+D +ILLDNFV   +   GS+ +A + +SKRSK  MSMK+ KK G L +P D  KF++F
Subjt:  LMATNMDWS----------------------------KELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIF

Query:  WPMHDMWKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR
         PMH MW+SYM + +   G+  L+  LL ADLHGA + V ECKI +FTG+ GIM+RET+ETFGI+T+DDKFRVVPKK SVFI Q DCWK+TL GDK  SR
Subjt:  WPMHDMWKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR

AT2G43190.4 ribonuclease P family protein

2.2e-53

46.35

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Query:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDP---IYFSLSAAVN
        M    V  D  + A+ A+ERR A AKA+LLQQQ++ N         K K   SD    +   +Q DS   L +  K   K V+  D     Y  LS  V+
Subjt:  MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDP---IYFSLSAAVN

Query:  ENLMATNMDWSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVGQDALARN
        ENL+ATN+ +S              V KS        +A + +SKRSK  MSMK+ KK G L +P D  KF++F PMH MW+SYM + +   G+  L+  
Subjt:  ENLMATNMDWSKELKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVGQDALARN

Query:  LLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR
        LL ADLHGA + V ECKI +FTG+ GIM+RET+ETFGI+T+DDKFRVVPKK SVFI Q DCWK+TL GDK  SR
Subjt:  LLIADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR

Sequences

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CDS sequence

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ATGGCGGACGGTAAAGTTTCTCAAGATCTAAGGAAACACGCTTTGGAGGCATTGGAGCGGAGGTGCGCCGCTGCGAAAGCCGAGCTTCTTCAACAACAGAAGAAGATTAA
TTCTACAGAGGAATTAAAGAAAGAAATCAAGAGAAAAGCTGCTTTGAGTGATTCCTCTTCAGTTGTTGTTTCGAGAAATCAGTATGATTCTTCAATTCTTTTGCAATCTG
GAGAGAAACCCCCAAATAAAGATGTTGAAGAAAGTGATCCTATATATTTCTCCCTCTCAGCTGCTGTGAATGAAAATTTGATGGCTACAAATATGGATTGGTCAAAAGAA
CTGAAAGTTGATGCTTGGATCCTTCTTGATAACTTTGTTCCAAAAAGCGCTGGAATGATGGGCTCTCGTATGAGGGCTTTACGGAGCAATTCAAAACGATCCAAAAGACA
TATGTCTATGAAGCAACATAAAAAGTGTGGAACATTGGATTTGCCTTCTGACTTCCATAAGTTTGAAATCTTTTGGCCAATGCATGATATGTGGAAAAGCTACATGAAAC
AACGGCTGCACCATGTTGGGCAAGATGCATTAGCTCGAAATCTTCTCATTGCAGATCTTCATGGTGCCATGATCCTAGTTGTCGAGTGTAAAATACCTGCTTTTACTGGA
ATAAGCGGCATCATGATTCGAGAAACTGCAGAAACATTTGGAATTGTGACGAAGGATGATAAGTTTCGAGTTGTGCCAAAGAAATCTTCTGTGTTTATTTTCCAATGGGA
TTGCTGGAAAGTTACATTGCTCGGAGATAAACTCAGTTCAAGAATTCCATCTGGTAACTGA

mRNA sequence

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Protein sequence

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MADGKVSQDLRKHALEALERRCAAAKAELLQQQKKINSTEELKKEIKRKAALSDSSSVVVSRNQYDSSILLQSGEKPPNKDVEESDPIYFSLSAAVNENLMATNMDWSKE
LKVDAWILLDNFVPKSAGMMGSRMRALRSNSKRSKRHMSMKQHKKCGTLDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVGQDALARNLLIADLHGAMILVVECKIPAFTG
ISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPSGN

Lag0027085 (gene) of Sponge gourd (AG-4) v1 genome