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Lag0027108 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027108
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein MODIFIER OF SNC1 11-like
Genome locationchr10:45112513..45113372
RNA-Seq ExpressionLag0027108
SyntenyLag0027108
Gene Ontology termsGO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040746 - THO1_MOS11, C-terminal domain
IPR044209 - Protein MODIFIER OF SNC1 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442609.1 PREDICTED: protein MODIFIER OF SNC1 11-like isoform X1 [Cucumis melo]6.7e-5477.78Show/hide
Query:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRSPSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE
        MAT+F  ELSEN LPGPK TLP D G  AAGNG+ + +++  S   + TKE +ESQ +AVGR+PE  ASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE
Subjt:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRSPSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE

Query:  RFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF
        RFGIDSVCGPDEMAKAEELKRKARAERFEL+TLS+ATDEEAKK+ARLARFAP+
Subjt:  RFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF

XP_011651924.1 protein MODIFIER OF SNC1 11 isoform X1 [Cucumis sativus]3.9e-5479.61Show/hide
Query:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRSPSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE
        MAT+FT ELS+N LPGPK TLP   G AAAGNG+ + +++  S    GTKE +ESQ +AVGR+PE  ASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE
Subjt:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRSPSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE

Query:  RFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAP
        RFGIDSVCGPDEMAKAEELKRKARAERFEL+TLSVATDEEAKK+ARLARFAP
Subjt:  RFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAP

XP_022934788.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata]5.6e-5375.78Show/hide
Query:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRS-------PS-SATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEA
        MAT+FT ELSEN LPGPKS LP +LG AAAGNG  + +++       PS S T T TKE  ESQRA +GR  E+ ASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRS-------PS-SATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFEL+TLS+ATDEEAKK+ARL RF+PF
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF

XP_023527279.1 protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo]9.6e-5375.78Show/hide
Query:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRS-------PS-SATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEA
        MAT+F+ ELSEN LPGPKS LP +LG AAAGNG  + +++       PS S T T TKE  ESQRAA+GR  E+ ASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRS-------PS-SATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFEL+TLS+ATDEEAKK+ARL RF+PF
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF

XP_038904188.1 protein MODIFIER OF SNC1 11-like [Benincasa hispida]1.1e-5681.82Show/hide
Query:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRS-PSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRA
        MATNFT ELSEN LPGPK TLP +LGFAAAGNG  + +++  SSAT+  TKE +ESQ AAVGR+PEY  SVFDIFKKIRRAERFGIPVRLSEAEKRFSRA
Subjt:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRS-PSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRA

Query:  ERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF
        ERFGIDSVCGPDEM KAEELKRKARAERFEL+TLS+AT EEAKK+ARLARFAPF
Subjt:  ERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF

TrEMBL top hitse value%identityAlignment
A0A0A0LDV0 Tho1_MOS11_C domain-containing protein1.9e-5479.61Show/hide
Query:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRSPSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE
        MAT+FT ELS+N LPGPK TLP   G AAAGNG+ + +++  S    GTKE +ESQ +AVGR+PE  ASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE
Subjt:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRSPSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE

Query:  RFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAP
        RFGIDSVCGPDEMAKAEELKRKARAERFEL+TLSVATDEEAKK+ARLARFAP
Subjt:  RFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAP

A0A1S3B640 protein MODIFIER OF SNC1 11-like isoform X13.2e-5477.78Show/hide
Query:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRSPSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE
        MAT+F  ELSEN LPGPK TLP D G  AAGNG+ + +++  S   + TKE +ESQ +AVGR+PE  ASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE
Subjt:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRSPSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE

Query:  RFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF
        RFGIDSVCGPDEMAKAEELKRKARAERFEL+TLS+ATDEEAKK+ARLARFAP+
Subjt:  RFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF

A0A5D3DNB7 Protein MODIFIER OF SNC1 11-like isoform X13.2e-5477.78Show/hide
Query:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRSPSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE
        MAT+F  ELSEN LPGPK TLP D G  AAGNG+ + +++  S   + TKE +ESQ +AVGR+PE  ASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE
Subjt:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRSPSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAE

Query:  RFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF
        RFGIDSVCGPDEMAKAEELKRKARAERFEL+TLS+ATDEEAKK+ARLARFAP+
Subjt:  RFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF

A0A6J1F8Q7 protein MODIFIER OF SNC1 11-like2.7e-5375.78Show/hide
Query:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRS-------PS-SATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEA
        MAT+FT ELSEN LPGPKS LP +LG AAAGNG  + +++       PS S T T TKE  ESQRA +GR  E+ ASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRS-------PS-SATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFEL+TLS+ATDEEAKK+ARL RF+PF
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF

A0A6J1J7D8 protein MODIFIER OF SNC1 11-like1.4e-5275.16Show/hide
Query:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRS-------PS-SATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEA
        MAT+FT ELSEN LPGPKS LP +LG AAAGNG  + +++       PS S T T TKE  ES+RA +GR  E+ ASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRS-------PS-SATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFEL+TLS+ATDEEAKK+ARL RF+PF
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPF

SwissProt top hitse value%identityAlignment
Q9LZ08 Protein MODIFIER OF SNC1 114.4e-1662.07Show/hide
Query:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELVTLSVATD---EEAKKEARLARF
        V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G +   KAEELKRKARA+RF + + +  TD   EEAKK+ARLARF
Subjt:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELVTLSVATD---EEAKKEARLARF

Arabidopsis top hitse value%identityAlignment
AT5G02770.1 unknown protein3.1e-1762.07Show/hide
Query:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELVTLSVATD---EEAKKEARLARF
        V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G +   KAEELKRKARA+RF + + +  TD   EEAKK+ARLARF
Subjt:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELVTLSVATD---EEAKKEARLARF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCAATTTCACAGCAGAACTCAGCGAAAACATTCTTCCAGGACCAAAATCAACCCTACCGCCGGATTTAGGATTCGCTGCCGCTGGCAATGGCAATGGCAATGG
CAACCGATCTCCCTCGTCCGCAACTCTCACCGGTACAAAGGAACGCATGGAATCTCAACGTGCCGCCGTGGGGAGAGTACCGGAGTATCGTGCTTCTGTTTTTGATATCT
TCAAGAAGATCCGTCGCGCAGAGCGGTTCGGGATTCCCGTTCGTCTATCGGAGGCAGAAAAGCGATTCTCTAGAGCTGAGAGGTTCGGCATCGATTCAGTATGTGGACCG
GATGAAATGGCCAAAGCAGAGGAGCTGAAGAGAAAGGCAAGAGCAGAGAGATTTGAGCTCGTAACTTTGTCTGTCGCTACCGATGAGGAGGCAAAGAAGGAAGCTCGGCT
TGCCAGATTTGCCCCATTTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCAATTTCACAGCAGAACTCAGCGAAAACATTCTTCCAGGACCAAAATCAACCCTACCGCCGGATTTAGGATTCGCTGCCGCTGGCAATGGCAATGGCAATGG
CAACCGATCTCCCTCGTCCGCAACTCTCACCGGTACAAAGGAACGCATGGAATCTCAACGTGCCGCCGTGGGGAGAGTACCGGAGTATCGTGCTTCTGTTTTTGATATCT
TCAAGAAGATCCGTCGCGCAGAGCGGTTCGGGATTCCCGTTCGTCTATCGGAGGCAGAAAAGCGATTCTCTAGAGCTGAGAGGTTCGGCATCGATTCAGTATGTGGACCG
GATGAAATGGCCAAAGCAGAGGAGCTGAAGAGAAAGGCAAGAGCAGAGAGATTTGAGCTCGTAACTTTGTCTGTCGCTACCGATGAGGAGGCAAAGAAGGAAGCTCGGCT
TGCCAGATTTGCCCCATTTTCATAA
Protein sequenceShow/hide protein sequence
MATNFTAELSENILPGPKSTLPPDLGFAAAGNGNGNGNRSPSSATLTGTKERMESQRAAVGRVPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDSVCGP
DEMAKAEELKRKARAERFELVTLSVATDEEAKKEARLARFAPFS