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Lag0027170 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027170
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionlight-harvesting complex-like protein OHP1, chloroplastic
Genome locationchr10:45574765..45575368
RNA-Seq ExpressionLag0027170
SyntenyLag0027170
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442523.1 PREDICTED: high-light-induced protein, chloroplastic [Cucumis melo]1.7e-4184.3Show/hide
Query:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIG-SVRANNSRARAPFRIQ-AAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELI
        MASSS +L SSL PARA T N+QDGR  LF IG SVRANNSRAR  FR+Q AAKPPAGVELPKVEPKFEAPFLGFTKTAE+WNSRACMIGLIG FVVELI
Subjt:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIG-SVRANNSRARAPFRIQ-AAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELI

Query:  LNKGILQVIGVDVGKGLDIPL
        LNK ILQVIGVDVGKGLD+PL
Subjt:  LNKGILQVIGVDVGKGLDIPL

XP_022145630.1 light-harvesting complex-like protein OHP1, chloroplastic [Momordica charantia]3.5e-5089.08Show/hide
Query:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASSS MLSSSLLPARAPT NRQDGRL LF IGSVRANNSRAR PFR+QAAK PAGVELPKVEPKFEAPFLGFTKTAE+WNSRACM+GL+GIF+VELIL+
Subjt:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDIPL
        KGILQVIGVDVGKGLD+PL
Subjt:  KGILQVIGVDVGKGLDIPL

XP_022934608.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita moschata]1.9e-4886.55Show/hide
Query:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASS+ +LSSSLLPARAP  +RQDGRL LF +GSVRANN RARAPFR+QAAKPPAGVELPKV+PKFEAPFLGFTKTAE+WNSRA MIGLIGIFVVELILN
Subjt:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDIPL
        KGILQVIGVD+GKGLD+PL
Subjt:  KGILQVIGVDVGKGLDIPL

XP_023526506.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita pepo subsp. pepo]9.4e-4885.71Show/hide
Query:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASS+ +LSSSLLPA AP  +RQDGRL LF +GSVRANN RARAPFR+QAAKPPAGVELPKV+PKFEAPFLGFTKTAE+WNSRA MIGLIGIFVVELILN
Subjt:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDIPL
        KGILQVIGVD+GKGLD+PL
Subjt:  KGILQVIGVDVGKGLDIPL

XP_038905156.1 light-harvesting complex-like protein OHP1, chloroplastic [Benincasa hispida]5.9e-5089.92Show/hide
Query:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASSS +LSSSLLPARAP  ++QDGRL LF IGSVRANNSR+R PFR+QAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
Subjt:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDIPL
        KGILQVIGVDVGKGLD+PL
Subjt:  KGILQVIGVDVGKGLDIPL

TrEMBL top hitse value%identityAlignment
A0A0A0LAI0 Uncharacterized protein8.3e-4284.3Show/hide
Query:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIG-SVRANNSRARAPFRIQ-AAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELI
        MASSS +L SSL PARA T N QD R  LF IG SVRAN+SRAR  FRIQ AAKPPAGVELPKVEPKF+APFLGFTKTAE+WNSRACMIGLIGIFVVELI
Subjt:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIG-SVRANNSRARAPFRIQ-AAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELI

Query:  LNKGILQVIGVDVGKGLDIPL
        LNKGILQVIGVDVGKGLD+PL
Subjt:  LNKGILQVIGVDVGKGLDIPL

A0A5A7TRS8 High-light-induced protein8.3e-4284.3Show/hide
Query:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIG-SVRANNSRARAPFRIQ-AAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELI
        MASSS +L SSL PARA T N+QDGR  LF IG SVRANNSRAR  FR+Q AAKPPAGVELPKVEPKFEAPFLGFTKTAE+WNSRACMIGLIG FVVELI
Subjt:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIG-SVRANNSRARAPFRIQ-AAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELI

Query:  LNKGILQVIGVDVGKGLDIPL
        LNK ILQVIGVDVGKGLD+PL
Subjt:  LNKGILQVIGVDVGKGLDIPL

A0A6J1CV10 light-harvesting complex-like protein OHP1, chloroplastic1.7e-5089.08Show/hide
Query:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASSS MLSSSLLPARAPT NRQDGRL LF IGSVRANNSRAR PFR+QAAK PAGVELPKVEPKFEAPFLGFTKTAE+WNSRACM+GL+GIF+VELIL+
Subjt:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDIPL
        KGILQVIGVDVGKGLD+PL
Subjt:  KGILQVIGVDVGKGLDIPL

A0A6J1F851 light-harvesting complex-like protein OHP1, chloroplastic9.2e-4986.55Show/hide
Query:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASS+ +LSSSLLPARAP  +RQDGRL LF +GSVRANN RARAPFR+QAAKPPAGVELPKV+PKFEAPFLGFTKTAE+WNSRA MIGLIGIFVVELILN
Subjt:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDIPL
        KGILQVIGVD+GKGLD+PL
Subjt:  KGILQVIGVDVGKGLDIPL

A0A6J1J0W8 light-harvesting complex-like protein OHP1, chloroplastic9.2e-4986.55Show/hide
Query:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASS+ +LSSSLLPARAP  +RQDGRL LF +GSVRANN RARAPFR+QAAKPPAGVELPKV+PKFEAPFLGFTKTAE+WNSRA MIGLIGIFVVELILN
Subjt:  MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDIPL
        KGILQVIGVD+GKGLD+PL
Subjt:  KGILQVIGVDVGKGLDIPL

SwissProt top hitse value%identityAlignment
O81208 Light-harvesting complex-like protein OHP1, chloroplastic6.8e-2557.14Show/hide
Query:  SSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRAN--NSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        SSSP LSSSL    +  S    GR         R N   +R + PF ++AAK P GV +PK +PK +  FLGFT+TAE+WNSRACMIGLIG F+VELILN
Subjt:  SSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRAN--NSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDIPL
        KGIL++IGV++GKGLD+PL
Subjt:  KGILQVIGVDVGKGLDIPL

Arabidopsis top hitse value%identityAlignment
AT5G02120.1 one helix protein4.8e-2657.14Show/hide
Query:  SSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRAN--NSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        SSSP LSSSL    +  S    GR         R N   +R + PF ++AAK P GV +PK +PK +  FLGFT+TAE+WNSRACMIGLIG F+VELILN
Subjt:  SSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRAN--NSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDIPL
        KGIL++IGV++GKGLD+PL
Subjt:  KGILQVIGVDVGKGLDIPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTCCTCTCCGATGTTATCATCGTCTCTTCTTCCGGCCAGAGCTCCGACCAGTAACCGTCAAGACGGCCGACTCTATCTCTTTCATATTGGTTCCGTACGAGC
CAATAACAGCAGGGCTCGTGCCCCTTTTAGGATTCAGGCCGCAAAGCCTCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCA
CTAAAACTGCTGAAGTCTGGAACTCCAGAGCCTGCATGATAGGCCTCATTGGGATTTTTGTAGTAGAGCTGATATTGAACAAAGGAATACTTCAGGTGATTGGAGTTGAT
GTTGGGAAAGGCCTGGATATTCCTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCTCCTCTCCGATGTTATCATCGTCTCTTCTTCCGGCCAGAGCTCCGACCAGTAACCGTCAAGACGGCCGACTCTATCTCTTTCATATTGGTTCCGTACGAGC
CAATAACAGCAGGGCTCGTGCCCCTTTTAGGATTCAGGCCGCAAAGCCTCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCA
CTAAAACTGCTGAAGTCTGGAACTCCAGAGCCTGCATGATAGGCCTCATTGGGATTTTTGTAGTAGAGCTGATATTGAACAAAGGAATACTTCAGGTGATTGGAGTTGAT
GTTGGGAAAGGCCTGGATATTCCTCTATGA
Protein sequenceShow/hide protein sequence
MASSSPMLSSSLLPARAPTSNRQDGRLYLFHIGSVRANNSRARAPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILNKGILQVIGVD
VGKGLDIPL