; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027173 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027173
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr10:45588104..45588460
RNA-Seq ExpressionLag0027173
SyntenyLag0027173
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]5.5e-0834.48Show/hide
Query:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLK-REESKPLR-----SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWV
        E  +  II W +W   NK+      PE   ++ +ID  I  S  +N+ LK +  +K L         + A WK P  NSWKLN +A W  D N G IGW+
Subjt:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLK-REESKPLR-----SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWV

Query:  VHDSNGSLINLDMKQI
        + D  G +I    + I
Subjt:  VHDSNGSLINLDMKQI
XP_022148549.1 uncharacterized protein LOC111017181 [Momordica charantia]8.8e-0630.69Show/hide
Query:  GAIIMWSVWNFSNK-AHVTNKPPEIERLRNSIDNNISKWKNSY---LKREESKPLRSQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVHDSNGSL
        G +++WS+W + N+  H T + P  +++R   ++ I ++  +    L  E+    R+      W  P  + WKLN DATW +  + G +GW+V DS G  
Subjt:  GAIIMWSVWNFSNK-AHVTNKPPEIERLRNSIDNNISKWKNSY---LKREESKPLRSQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVHDSNGSL

Query:  I
        I
Subjt:  I
XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]5.2e-0634.58Show/hide
Query:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLKR--EESKPLR--SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVH
        E  +  II   +W   NK+       E   ++ +ID  I  S  +++ LKR  ++  P+R     ++A WK P  NSWKLN DA W  D N   IGW++ 
Subjt:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLKR--EESKPLR--SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVH

Query:  DSNGSLI
        D  G +I
Subjt:  DSNGSLI
XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]5.2e-0634.58Show/hide
Query:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLKR--EESKPLR--SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVH
        E  +  II   +W   NK+       E   ++ +ID  I  S  +++ LKR  ++  P+R     ++A WK P  NSWKLN DA W  D N   IGW++ 
Subjt:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLKR--EESKPLR--SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVH

Query:  DSNGSLI
        D  G +I
Subjt:  DSNGSLI
XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]2.1e-0734.48Show/hide
Query:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLK-REESKPLR-----SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWV
        E  +  II W +W   NK+       E   ++  ID  I  S  +++ LK +  +K L         + A WK P  NSWKLN DA W  D N G IGW+
Subjt:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLK-REESKPLR-----SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWV

Query:  VHDSNGSLINLDMKQI
        + D  G +I  D + I
Subjt:  VHDSNGSLINLDMKQI
TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134122.7e-0834.48Show/hide
Query:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLK-REESKPLR-----SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWV
        E  +  II W +W   NK+      PE   ++ +ID  I  S  +N+ LK +  +K L         + A WK P  NSWKLN +A W  D N G IGW+
Subjt:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLK-REESKPLR-----SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWV

Query:  VHDSNGSLINLDMKQI
        + D  G +I    + I
Subjt:  VHDSNGSLINLDMKQI
A0A6J1D4B6 uncharacterized protein LOC1110171814.3e-0630.69Show/hide
Query:  GAIIMWSVWNFSNK-AHVTNKPPEIERLRNSIDNNISKWKNSY---LKREESKPLRSQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVHDSNGSL
        G +++WS+W + N+  H T + P  +++R   ++ I ++  +    L  E+    R+      W  P  + WKLN DATW +  + G +GW+V DS G  
Subjt:  GAIIMWSVWNFSNK-AHVTNKPPEIERLRNSIDNNISKWKNSY---LKREESKPLRSQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVHDSNGSL

Query:  I
        I
Subjt:  I
A0A6J1DL64 uncharacterized protein LOC111022134 isoform X12.5e-0634.58Show/hide
Query:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLKR--EESKPLR--SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVH
        E  +  II   +W   NK+       E   ++ +ID  I  S  +++ LKR  ++  P+R     ++A WK P  NSWKLN DA W  D N   IGW++ 
Subjt:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLKR--EESKPLR--SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVH

Query:  DSNGSLI
        D  G +I
Subjt:  DSNGSLI
A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X22.5e-0634.58Show/hide
Query:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLKR--EESKPLR--SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVH
        E  +  II   +W   NK+       E   ++ +ID  I  S  +++ LKR  ++  P+R     ++A WK P  NSWKLN DA W  D N   IGW++ 
Subjt:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLKR--EESKPLR--SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVH

Query:  DSNGSLI
        D  G +I
Subjt:  DSNGSLI
A0A6J1DSV1 uncharacterized protein LOC1110236081.0e-0734.48Show/hide
Query:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLK-REESKPLR-----SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWV
        E  +  II W +W   NK+       E   ++  ID  I  S  +++ LK +  +K L         + A WK P  NSWKLN DA W  D N G IGW+
Subjt:  EDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNI--SKWKNSYLK-REESKPLR-----SQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWV

Query:  VHDSNGSLINLDMKQI
        + D  G +I  D + I
Subjt:  VHDSNGSLINLDMKQI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.2e-0423.81Show/hide
Query:  IMWSVWNFSNKAHVTNKPPEIERLRNSIDNNISKWK-NSYLKREESKPLRSQASQAIWKKPQPNSW-KLNADATWFEDRNRGRIGWVVHDSNGSLINLDM
        ++W +W   N+     K  +   +      +  +W     L+ + S P   +     WK P P  W K N DATW  +  R  IGW++ + +G ++ +  
Subjt:  IMWSVWNFSNKAHVTNKPPEIERLRNSIDNNISKWK-NSYLKREESKPLRSQASQAIWKKPQPNSW-KLNADATWFEDRNRGRIGWVVHDSNGSLINLDM

Query:  KQINR
        + + R
Subjt:  KQINR
AT4G29090.1 Ribonuclease H-like superfamily protein2.1e-0525.26Show/hide
Query:  IMWSVWNFSNKAHVTNKPPEIERLRNSIDNNISKWK-NSYLKREESKPLRSQASQAIWKKPQPNSW-KLNADATWFEDRNRGRIGWVVHDSNGSL
        ++W +W   N+     +    + +    ++++ +W+  +  +   +KP  +++S   W +P P+ W K N DATW  D  R  IGWV+ +  G +
Subjt:  IMWSVWNFSNKAHVTNKPPEIERLRNSIDNNISKWK-NSYLKREESKPLRSQASQAIWKKPQPNSW-KLNADATWFEDRNRGRIGWVVHDSNGSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTCTAATCTATCTCTGGAAGATGCTAAAGGGGCGATTATCATGTGGAGTGTGTGGAATTTCAGTAACAAGGCTCATGTGACAAACAAGCCTCCAGAAATTGAAAG
ACTTAGGAATTCCATTGACAACAACATTTCAAAATGGAAGAACTCTTACCTTAAGAGGGAAGAGTCGAAGCCATTGAGGAGCCAAGCGAGTCAGGCAATCTGGAAAAAAC
CTCAGCCCAACTCCTGGAAATTGAACGCGGACGCAACATGGTTTGAAGATCGAAACAGAGGCAGAATCGGTTGGGTGGTGCATGACTCGAATGGATCCTTGATCAATCTC
GACATGAAACAAATTAATCGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTCTAATCTATCTCTGGAAGATGCTAAAGGGGCGATTATCATGTGGAGTGTGTGGAATTTCAGTAACAAGGCTCATGTGACAAACAAGCCTCCAGAAATTGAAAG
ACTTAGGAATTCCATTGACAACAACATTTCAAAATGGAAGAACTCTTACCTTAAGAGGGAAGAGTCGAAGCCATTGAGGAGCCAAGCGAGTCAGGCAATCTGGAAAAAAC
CTCAGCCCAACTCCTGGAAATTGAACGCGGACGCAACATGGTTTGAAGATCGAAACAGAGGCAGAATCGGTTGGGTGGTGCATGACTCGAATGGATCCTTGATCAATCTC
GACATGAAACAAATTAATCGGAAATGA
Protein sequenceShow/hide protein sequence
MVSNLSLEDAKGAIIMWSVWNFSNKAHVTNKPPEIERLRNSIDNNISKWKNSYLKREESKPLRSQASQAIWKKPQPNSWKLNADATWFEDRNRGRIGWVVHDSNGSLINL
DMKQINRK