| GenBank top hits | e value | %identity | Alignment |
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| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 8.5e-56 | 42.26 | Show/hide |
Query: MDSPSTEKSGSDLDNASQNLKIVNPGSKITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKF-VASDSSSAS-TKIPNPAYEHWVRQDNLITA
M S S+ + + +S +I G+KI+ VKL++D FLLWK QILTAL + L++ +E + E PSK+ ++++SSSAS T PNPAY+ W RQD LI++
Subjt: MDSPSTEKSGSDLDNASQNLKIVNPGSKITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKF-VASDSSSAS-TKIPNPAYEHWVRQDNLITA
Query: WLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSV
WLLGSMS +L++ML C SA+E+W L FSSR +A+ M K+KL + KKG++ L++YFLK+ VD+LA+ + +S +DH+L++ AGLG++Y S +SV
Subjt: WLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSV
Query: ITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNGNGNNRNNNTRNGR-NGNNRRFWNTNSNEPQCQLCRRFG
I+ + ++P +Q+V SLL Q+++ + + + PSVN+ T T+++ + S + N NN + N R GR NG + R N N+PQCQ+C + G
Subjt: ITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNGNGNNRNNNTRNGR-NGNNRRFWNTNSNEPQCQLCRRFG
Query: HTVQRCYYRF
++ RC++R+
Subjt: HTVQRCYYRF
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| TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 8.5e-56 | 42.26 | Show/hide |
Query: MDSPSTEKSGSDLDNASQNLKIVNPGSKITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKF-VASDSSSAS-TKIPNPAYEHWVRQDNLITA
M S S+ + + +S +I G+KI+ VKL++D FLLWK QILTAL + L++ +E + E PSK+ ++++SSSAS T PNPAY+ W RQD LI++
Subjt: MDSPSTEKSGSDLDNASQNLKIVNPGSKITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKF-VASDSSSAS-TKIPNPAYEHWVRQDNLITA
Query: WLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSV
WLLGSMS +L++ML C SA+E+W L FSSR +A+ M K+KL + KKG++ L++YFLK+ VD+LA+ + +S +DH+L++ AGLG++Y S +SV
Subjt: WLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSV
Query: ITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNGNGNNRNNNTRNGR-NGNNRRFWNTNSNEPQCQLCRRFG
I+ + ++P +Q+V SLL Q+++ + + + PSVN+ T T+++ + S + N NN + N R GR NG + R N N+PQCQ+C + G
Subjt: ITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNGNGNNRNNNTRNGR-NGNNRRFWNTNSNEPQCQLCRRFG
Query: HTVQRCYYRF
++ RC++R+
Subjt: HTVQRCYYRF
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| XP_022136882.1 dr1-associated corepressor homolog isoform X1 [Momordica charantia] | 4.1e-50 | 53.81 | Show/hide |
Query: VRQDNLITAWLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLG
++QD LIT+WL SM +L EM+ C++AREVW+IL N ++SRN+ARVM LKSKL + KKGNL L+DYF KVK +VDSLAAAG+K++ EDH++H+ GL
Subjt: VRQDNLITAWLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLG
Query: TEYDSAVSVITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNG-NGNNRNNNTRNGRNGNNRRFWNTNSNEP
+E++S VSVI+ + +T LQ+VYSLL + + R RN SIN DG+ PSVNLT +Q +SNS +S +G +NN ++N N N RR WN+N N P
Subjt: TEYDSAVSVITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNG-NGNNRNNNTRNGRNGNNRRFWNTNSNEP
Query: QCQLCRRFGHTVQRCYYRFERWF
QCQ+ +FGHT RCY RFE+ F
Subjt: QCQLCRRFGHTVQRCYYRFERWF
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| XP_022136883.1 dr1-associated corepressor homolog isoform X2 [Momordica charantia] | 4.1e-50 | 53.81 | Show/hide |
Query: VRQDNLITAWLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLG
++QD LIT+WL SM +L EM+ C++AREVW+IL N ++SRN+ARVM LKSKL + KKGNL L+DYF KVK +VDSLAAAG+K++ EDH++H+ GL
Subjt: VRQDNLITAWLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLG
Query: TEYDSAVSVITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNG-NGNNRNNNTRNGRNGNNRRFWNTNSNEP
+E++S VSVI+ + +T LQ+VYSLL + + R RN SIN DG+ PSVNLT +Q +SNS +S +G +NN ++N N N RR WN+N N P
Subjt: TEYDSAVSVITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNG-NGNNRNNNTRNGRNGNNRRFWNTNSNEP
Query: QCQLCRRFGHTVQRCYYRFERWF
QCQ+ +FGHT RCY RFE+ F
Subjt: QCQLCRRFGHTVQRCYYRFERWF
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| XP_022154487.1 uncharacterized protein LOC111021757 [Momordica charantia] | 9.1e-74 | 52.94 | Show/hide |
Query: SDLDNASQNLKIVNPGSKITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKFV--ASDSSSASTKIPNPAYEHWVRQDNLITAWLLGSMSNSL
SD Q K +NPGSK++ V+L++DN LLWK QI TAL+G+GL+ +I+ + + P++FV D SS+S+ NPAY W++QD LI+AWLLGSM+ +
Subjt: SDLDNASQNLKIVNPGSKITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKFV--ASDSSSASTKIPNPAYEHWVRQDNLITAWLLGSMSNSL
Query: LSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSVITEKNETPPL
LS+ML+C SARE+W +L F+SR +ARVM LK KL + KKGNL L+DYFLK+KN+VDSLA AG+K+S EDH++H+ AGLG E+D+ +SVIT +N L
Subjt: LSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSVITEKNETPPL
Query: QKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSK---QASSSNSGESSNGNGNNRNNNTRNGRNGNNRRFWNTNSNEPQCQLCRRFGHTVQRCYY
Q+V SLL Q+ R RNL IN DGS PSVNLT + S+ K S + SN + R N R+ +NRR W T +N+PQCQ+C RFGHT RCY
Subjt: QKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSK---QASSSNSGESSNGNGNNRNNNTRNGRNGNNRRFWNTNSNEPQCQLCRRFGHTVQRCYY
Query: RFERWF
RFER F
Subjt: RFERWF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.1e-56 | 42.26 | Show/hide |
Query: MDSPSTEKSGSDLDNASQNLKIVNPGSKITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKF-VASDSSSAS-TKIPNPAYEHWVRQDNLITA
M S S+ + + +S +I G+KI+ VKL++D FLLWK QILTAL + L++ +E + E PSK+ ++++SSSAS T PNPAY+ W RQD LI++
Subjt: MDSPSTEKSGSDLDNASQNLKIVNPGSKITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKF-VASDSSSAS-TKIPNPAYEHWVRQDNLITA
Query: WLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSV
WLLGSMS +L++ML C SA+E+W L FSSR +A+ M K+KL + KKG++ L++YFLK+ VD+LA+ + +S +DH+L++ AGLG++Y S +SV
Subjt: WLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSV
Query: ITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNGNGNNRNNNTRNGR-NGNNRRFWNTNSNEPQCQLCRRFG
I+ + ++P +Q+V SLL Q+++ + + + PSVN+ T T+++ + S + N NN + N R GR NG + R N N+PQCQ+C + G
Subjt: ITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNGNGNNRNNNTRNGR-NGNNRRFWNTNSNEPQCQLCRRFG
Query: HTVQRCYYRF
++ RC++R+
Subjt: HTVQRCYYRF
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| A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.1e-56 | 42.26 | Show/hide |
Query: MDSPSTEKSGSDLDNASQNLKIVNPGSKITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKF-VASDSSSAS-TKIPNPAYEHWVRQDNLITA
M S S+ + + +S +I G+KI+ VKL++D FLLWK QILTAL + L++ +E + E PSK+ ++++SSSAS T PNPAY+ W RQD LI++
Subjt: MDSPSTEKSGSDLDNASQNLKIVNPGSKITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKF-VASDSSSAS-TKIPNPAYEHWVRQDNLITA
Query: WLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSV
WLLGSMS +L++ML C SA+E+W L FSSR +A+ M K+KL + KKG++ L++YFLK+ VD+LA+ + +S +DH+L++ AGLG++Y S +SV
Subjt: WLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSV
Query: ITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNGNGNNRNNNTRNGR-NGNNRRFWNTNSNEPQCQLCRRFG
I+ + ++P +Q+V SLL Q+++ + + + PSVN+ T T+++ + S + N NN + N R GR NG + R N N+PQCQ+C + G
Subjt: ITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNGNGNNRNNNTRNGR-NGNNRRFWNTNSNEPQCQLCRRFG
Query: HTVQRCYYRF
++ RC++R+
Subjt: HTVQRCYYRF
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| A0A6J1C6N9 dr1-associated corepressor homolog isoform X1 | 2.0e-50 | 53.81 | Show/hide |
Query: VRQDNLITAWLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLG
++QD LIT+WL SM +L EM+ C++AREVW+IL N ++SRN+ARVM LKSKL + KKGNL L+DYF KVK +VDSLAAAG+K++ EDH++H+ GL
Subjt: VRQDNLITAWLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLG
Query: TEYDSAVSVITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNG-NGNNRNNNTRNGRNGNNRRFWNTNSNEP
+E++S VSVI+ + +T LQ+VYSLL + + R RN SIN DG+ PSVNLT +Q +SNS +S +G +NN ++N N N RR WN+N N P
Subjt: TEYDSAVSVITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNG-NGNNRNNNTRNGRNGNNRRFWNTNSNEP
Query: QCQLCRRFGHTVQRCYYRFERWF
QCQ+ +FGHT RCY RFE+ F
Subjt: QCQLCRRFGHTVQRCYYRFERWF
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| A0A6J1C8R2 dr1-associated corepressor homolog isoform X2 | 2.0e-50 | 53.81 | Show/hide |
Query: VRQDNLITAWLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLG
++QD LIT+WL SM +L EM+ C++AREVW+IL N ++SRN+ARVM LKSKL + KKGNL L+DYF KVK +VDSLAAAG+K++ EDH++H+ GL
Subjt: VRQDNLITAWLLGSMSNSLLSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLG
Query: TEYDSAVSVITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNG-NGNNRNNNTRNGRNGNNRRFWNTNSNEP
+E++S VSVI+ + +T LQ+VYSLL + + R RN SIN DG+ PSVNLT +Q +SNS +S +G +NN ++N N N RR WN+N N P
Subjt: TEYDSAVSVITEKNETPPLQKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNG-NGNNRNNNTRNGRNGNNRRFWNTNSNEP
Query: QCQLCRRFGHTVQRCYYRFERWF
QCQ+ +FGHT RCY RFE+ F
Subjt: QCQLCRRFGHTVQRCYYRFERWF
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| A0A6J1DLT9 uncharacterized protein LOC111021757 | 4.4e-74 | 52.94 | Show/hide |
Query: SDLDNASQNLKIVNPGSKITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKFV--ASDSSSASTKIPNPAYEHWVRQDNLITAWLLGSMSNSL
SD Q K +NPGSK++ V+L++DN LLWK QI TAL+G+GL+ +I+ + + P++FV D SS+S+ NPAY W++QD LI+AWLLGSM+ +
Subjt: SDLDNASQNLKIVNPGSKITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKFV--ASDSSSASTKIPNPAYEHWVRQDNLITAWLLGSMSNSL
Query: LSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSVITEKNETPPL
LS+ML+C SARE+W +L F+SR +ARVM LK KL + KKGNL L+DYFLK+KN+VDSLA AG+K+S EDH++H+ AGLG E+D+ +SVIT +N L
Subjt: LSEMLECDSAREVWRILNNQFSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSVITEKNETPPL
Query: QKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSK---QASSSNSGESSNGNGNNRNNNTRNGRNGNNRRFWNTNSNEPQCQLCRRFGHTVQRCYY
Q+V SLL Q+ R RNL IN DGS PSVNLT + S+ K S + SN + R N R+ +NRR W T +N+PQCQ+C RFGHT RCY
Subjt: QKVYSLLFAQKNRIARNLSINLDGSTPSVNLTTHSSTSK---QASSSNSGESSNGNGNNRNNNTRNGRNGNNRRFWNTNSNEPQCQLCRRFGHTVQRCYY
Query: RFERWF
RFER F
Subjt: RFERWF
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 2.2e-09 | 23.53 | Show/hide |
Query: ITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKFVASDSSSASTKIPNPAYEHWVRQDNLITAWLLGSMSNSLLSEMLECDSAREVWRILNNQ
I + DEDN++ WK++ + LR + KF D + +P Y+ W + + ++ WL+ SM++ LL ++ ++A ++W L
Subjt: ITTVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKFVASDSSSASTKIPNPAYEHWVRQDNLITAWLLGSMSNSLLSEMLECDSAREVWRILNNQ
Query: FSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNI
F ++ L+ +L + ++G +E+YF K+ +
Subjt: FSSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNI
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| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 1.5e-10 | 22.27 | Show/hide |
Query: LDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKFVASDSSSASTKIPNPAYE-HWVRQDNLITAWLLGSMS-NSLLSEMLECDSAREVWRILNNQFSS
++E N+ W+ LT + HI+ T +P A + +W ++D ++ L G+++ + ++R++W + NQF +
Subjt: LDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKFVASDSSSASTKIPNPAYE-HWVRQDNLITAWLLGSMS-NSLLSEMLECDSAREVWRILNNQFSS
Query: RNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSVITEKNETPPLQKVYSLLFAQKNRIARNLSIN--
AR + L S+L + G++++ DY+ K+K + DSL ++ + V+++ GL ++D+ ++VI + P ++L +++R+ R + N
Subjt: RNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSVITEKNETPPLQKVYSLLFAQKNRIARNLSIN--
Query: -LDGSTPSVNLTTHSSTSKQASSSNSGESSNGNGNNRNNNTRNGRNG
+D S+ S L + + G G R NN GR G
Subjt: -LDGSTPSVNLTTHSSTSKQASSSNSGESSNGNGNNRNNNTRNGRNG
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| AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 8.1e-12 | 24.81 | Show/hide |
Query: TVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKFVASDSSSASTKIPNPAYEHWVRQDNLITAWLLGSMSNSLLSEMLECD-SAREVWRILNNQF
T+ L++ N+ +W+ T G+ HI D SS T + + W +D L+ W+ G++++SLL +++ +AR++W L N F
Subjt: TVKLDEDNFLLWKLQILTALRGHGLKHHIEEDVEIPSKFVASDSSSASTKIPNPAYEHWVRQDNLITAWLLGSMSNSLLSEMLECD-SAREVWRILNNQF
Query: SSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSVITEKNETPPLQKVYSLLFAQKNRIAR----N
AR + +++L +T +L + +Y K+K++ D L +S V+HL GL +YD ++VI K+ P + S+L +++R++ +
Subjt: SSRNVARVMDLKSKLGSTKKGNLKLEDYFLKVKNIVDSLAAAGRKMSHEDHVLHLCAGLGTEYDSAVSVITEKNETPPLQKVYSLLFAQKNRIAR----N
Query: LSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNGNGNNRNNNTRNGRNG---NNRRFWNTN
LS S +V T + ++ S+ G G ++ N G + NN W N
Subjt: LSINLDGSTPSVNLTTHSSTSKQASSSNSGESSNGNGNNRNNNTRNGRNG---NNRRFWNTN
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