; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027254 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027254
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr10:46217220..46220392
RNA-Seq ExpressionLag0027254
SyntenyLag0027254
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1224333.1 Chlorophyll a-b binding protein CP29.2, chloroplastic [Morella rubra]4.1e-12686.97Show/hide
Query:  GRVERKPDSHLEKGNKKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQP
        GRV+ +     +K   +P +  V+     P   PGA APEWLDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKN+AGDVIGTRFE++DVKSTPFQP
Subjt:  GRVERKPDSHLEKGNKKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQP

Query:  YSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPL
        YSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSI+ LIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPL
Subjt:  YSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPL

Query:  GLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        GLA+DPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  GLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

KAF3448904.1 hypothetical protein FNV43_RR09620 [Rhamnella rubrinervis]1.4e-12687.36Show/hide
Query:  GRVERKPDSHLEKGNKKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQP
        GRV+ +     +K  + P +  V+     P   PGA APEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKN+AGDVIGTRFENADVKSTPFQP
Subjt:  GRVERKPDSHLEKGNKKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQP

Query:  YSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPL
        Y+EVFGLQRFRECELIHGRWAMLATLGALTVEWLTG+TWQDAGKVELVEGSSYLGQPLPFSI+TLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK+FDPL
Subjt:  YSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPL

Query:  GLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        GLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Subjt:  GLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

XP_028072131.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Camellia sinensis]1.4e-12689.88Show/hide
Query:  KKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECEL
        K P ++I +     P   PGA APEWLDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKN AGDVIGTRFE+ADVKSTPFQPY+EVFGLQRFRECEL
Subjt:  KKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECEL

Query:  IHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLA
        IHGRWAMLATLGALTVEWLTGVTWQDAGKVEL+EGSSYLGQPLPFSI+TLIWIEV+VIGYIEFQRNAELDPEKRLYPGGK+FDPLGLA+DPEKKATLQLA
Subjt:  IHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLA

Query:  EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF
        EIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIIDTFF
Subjt:  EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF

XP_028086654.1 chlorophyll a-b binding protein CP29.2, chloroplastic-like [Camellia sinensis]5.3e-12689.07Show/hide
Query:  KKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECEL
        K P ++  +     P   PGA APEWLDG+LVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKN+AGD+IGTRFE+ADVKSTPFQPYSEVFGLQRFRECEL
Subjt:  KKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECEL

Query:  IHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLA
        IHGRWAMLATLGALTVEWLTG+TWQDAGKVEL+EGSSYLGQPLPFSI+TLIWIEVLVIGYIEFQRN+ELDPEKRLYPGGKYFDPLGLA+DPEKKATLQLA
Subjt:  IHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLA

Query:  EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF
        EIKHARLAM+A LGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF
Subjt:  EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF

XP_038904041.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]8.8e-12985.97Show/hide
Query:  PASPSPHPGRVER-----KPDSHLEKGNKKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTR
        P +P+   GRV+      K  S  +K +KKP  +        P   PGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKNVAGDVIGTR
Subjt:  PASPSPHPGRVER-----KPDSHLEKGNKKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTR

Query:  FENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPE
        FENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN ELDPE
Subjt:  FENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPE

Query:  KRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFFFSS
        KRLYPGGKYFDPLGLAADPEKK TLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT F+SS
Subjt:  KRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFFFSS

TrEMBL top hitse value%identityAlignment
A0A061EQW6 Chlorophyll a-b binding protein, chloroplastic9.8e-12689.11Show/hide
Query:  GNKKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFREC
        G KK   ++ +     P   PGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQ+ELDSLDQNLAKNVAG++IGTR E +DVK+TPFQPYSEVFGLQRFREC
Subjt:  GNKKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFREC

Query:  ELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQ
        ELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPF+ISTLIWIEVL+IGYIEFQRNAELDPEKRLYPGGK+FDPLGLA+DPEKKATLQ
Subjt:  ELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQ

Query:  LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

A0A1R3IR75 Chlorophyll a-b binding protein, chloroplastic1.7e-12588.84Show/hide
Query:  GNKKPTEEIVEAQL---GPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRF
        G KK  +++ +++      P   PGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQ+ELDSLDQNLAKNVAGD+IGTR E ADVK+TPFQPY+EVFGLQRF
Subjt:  GNKKPTEEIVEAQL---GPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRF

Query:  RECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKA
        RECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGG +FDPLGLAADPEKKA
Subjt:  RECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKA

Query:  TLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        TLQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  TLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

A0A4S4DT89 Chlorophyll a-b binding protein, chloroplastic2.6e-12689.07Show/hide
Query:  KKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECEL
        K P ++  +     P   PGA APEWLDG+LVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKN+AGD+IGTRFE+ADVKSTPFQPYSEVFGLQRFRECEL
Subjt:  KKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECEL

Query:  IHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLA
        IHGRWAMLATLGALTVEWLTG+TWQDAGKVEL+EGSSYLGQPLPFSI+TLIWIEVLVIGYIEFQRN+ELDPEKRLYPGGKYFDPLGLA+DPEKKATLQLA
Subjt:  IHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLA

Query:  EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF
        EIKHARLAM+A LGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF
Subjt:  EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFF

A0A6A1WHK8 Chlorophyll a-b binding protein, chloroplastic2.0e-12686.97Show/hide
Query:  GRVERKPDSHLEKGNKKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQP
        GRV+ +     +K   +P +  V+     P   PGA APEWLDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKN+AGDVIGTRFE++DVKSTPFQP
Subjt:  GRVERKPDSHLEKGNKKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQP

Query:  YSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPL
        YSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSI+ LIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPL
Subjt:  YSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPL

Query:  GLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        GLA+DPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  GLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

A0A6A3A3K3 Chlorophyll a-b binding protein, chloroplastic1.7e-12588.84Show/hide
Query:  GNKKPTEEIVEAQL---GPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRF
        G KK  +++ +++      P   PGAVAP+WLDGSLVGDYGFDPFGLGKPAEYLQ++LDSLDQNLAKNVAGD+IGTR E ADVK+TPFQPYSEVFGLQRF
Subjt:  GNKKPTEEIVEAQL---GPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRF

Query:  RECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKA
        RECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK+FDPLGLAADPEKKA
Subjt:  RECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKA

Query:  TLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
         LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  TLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

SwissProt top hitse value%identityAlignment
Q01667 Chlorophyll a-b binding protein 6, chloroplastic4.8e-3741.38Show/hide
Query:  VPGAVAPEWLDGSLVGDYGFDPFGLGK-PAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTV
        +PG   P +LDGS  GD+GFDP GLG+ PA                                             L+R++E ELIH RWAMLA  G L  
Subjt:  VPGAVAPEWLDGSLVGDYGFDPFGLGK-PAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTV

Query:  EWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFL
        E L    W  A +   + G  ++YLG P+P+ ++ T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG + DP+K   L++ EIK+ RLA++AF+
Subjt:  EWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFL

Query:  GFAVQAAA-TGKGPLNNWATHLSDPLHTTIID
        GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  GFAVQAAA-TGKGPLNNWATHLSDPLHTTIID

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic1.4e-12491.81Show/hide
Query:  PALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAL
        P   PGA++P+WLDGSLVGDYGFDPFGLGKPAEYLQF++DSLDQNLAKN+AGDVIGTR E AD KSTPFQPYSEVFG+QRFRECELIHGRWAMLATLGAL
Subjt:  PALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAL

Query:  TVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLG
        +VEWLTGVTWQDAGKVELV+GSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELD EKRLYPGGK+FDPLGLAADPEK A LQLAEIKHARLAMVAFLG
Subjt:  TVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLG

Query:  FAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        FAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  FAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

Q93WD2 Chlorophyll a-b binding protein CP293.5e-6457.89Show/hide
Query:  GPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTP--------FQPYSEVFGLQRFRECELIHGR
        G    +P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G V       A V++TP          PYSEVFGL RFRECELIHGR
Subjt:  GPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTP--------FQPYSEVFGLQRFRECELIHGR

Query:  WAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKA-TLQLAEIK
        WAMLA LGAL  E  TGV+W +AGKVEL +G+SY G  LPFSI+ LIWIEV+++G  EF RN+E +PEKR YPGG  FDPL LA++ E++A  L+ AEIK
Subjt:  WAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKA-TLQLAEIK

Query:  HARLAMVAFLGFAVQAAATGKGPLNNWA
        HARLAMV+F G+ VQA +TG+G L + A
Subjt:  HARLAMVAFLGFAVQAAATGKGPLNNWA

Q9S7W1 Chlorophyll a-b binding protein CP29.3, chloroplastic6.4e-9871.76Show/hide
Query:  PSPHPGRVE-RKPDSHLEKGNKKPTEEIVEAQLGPPALV--PGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENAD
        P P  GRV+ R   S  +K    P ++  + Q     LV  PGA  PEWLDGS++GD GFDPFGLGKPAEYLQ++ D LDQNLAKNVAGD+IG   E+++
Subjt:  PSPHPGRVE-RKPDSHLEKGNKKPTEEIVEAQLGPPALV--PGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENAD

Query:  VKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYP
        +K TPFQPY+EVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVELVEGSSYLGQPLPFS++TLIWIEVLV+GYIEFQRN+ELDPEKR+YP
Subjt:  VKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYP

Query:  GGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT
        GG YFDPLGLAADPEK  TL+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  GGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic5.3e-12185.54Show/hide
Query:  GNKKPTEEIVEAQLGP-PALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRE
        G KK + +  +  +   P   PGA +PE+LDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKN+ G+VIGTR E  D KSTPFQPYSEVFGLQRFRE
Subjt:  GNKKPTEEIVEAQLGP-PALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRE

Query:  CELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATL
        CELIHGRWAMLATLGA+TVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELD EKRLYPGGK+FDPLGLA+DP KKA L
Subjt:  CELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATL

Query:  QLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        QLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  QLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

Arabidopsis top hitse value%identityAlignment
AT2G40100.1 light harvesting complex photosystem II4.5e-9971.76Show/hide
Query:  PSPHPGRVE-RKPDSHLEKGNKKPTEEIVEAQLGPPALV--PGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENAD
        P P  GRV+ R   S  +K    P ++  + Q     LV  PGA  PEWLDGS++GD GFDPFGLGKPAEYLQ++ D LDQNLAKNVAGD+IG   E+++
Subjt:  PSPHPGRVE-RKPDSHLEKGNKKPTEEIVEAQLGPPALV--PGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENAD

Query:  VKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYP
        +K TPFQPY+EVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVELVEGSSYLGQPLPFS++TLIWIEVLV+GYIEFQRN+ELDPEKR+YP
Subjt:  VKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYP

Query:  GGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT
        GG YFDPLGLAADPEK  TL+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  GGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT

AT2G40100.2 light harvesting complex photosystem II1.5e-4964.29Show/hide
Query:  PSPHPGRVE-RKPDSHLEKGNKKPTEEIVEAQLGPPALV--PGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENAD
        P P  GRV+ R   S  +K    P ++  + Q     LV  PGA  PEWLDGS++GD GFDPFGLGKPAEYLQ++ D LDQNLAKNVAGD+IG   E+++
Subjt:  PSPHPGRVE-RKPDSHLEKGNKKPTEEIVEAQLGPPALV--PGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENAD

Query:  VKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVE
        +K TPFQPY+EVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVE
Subjt:  VKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVE

AT3G08940.1 light harvesting complex photosystem II5.6e-5773.65Show/hide
Query:  GNKKPTEEIVEAQLGP-PALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRE
        G KK + +  +  +   P   PGA +PE+LDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKN+ G+VIGTR E  D KSTPFQPYSEVFGLQRFRE
Subjt:  GNKKPTEEIVEAQLGP-PALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRE

Query:  CELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
        CELIHGRWAMLATLGA+TVEWLTGVTWQDAGKV  +  SS L   L F
Subjt:  CELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPF

AT3G08940.2 light harvesting complex photosystem II3.8e-12285.54Show/hide
Query:  GNKKPTEEIVEAQLGP-PALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRE
        G KK + +  +  +   P   PGA +PE+LDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKN+ G+VIGTR E  D KSTPFQPYSEVFGLQRFRE
Subjt:  GNKKPTEEIVEAQLGP-PALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRE

Query:  CELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATL
        CELIHGRWAMLATLGA+TVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELD EKRLYPGGK+FDPLGLA+DP KKA L
Subjt:  CELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATL

Query:  QLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        QLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  QLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF

AT5G01530.1 light harvesting complex photosystem II9.7e-12691.81Show/hide
Query:  PALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAL
        P   PGA++P+WLDGSLVGDYGFDPFGLGKPAEYLQF++DSLDQNLAKN+AGDVIGTR E AD KSTPFQPYSEVFG+QRFRECELIHGRWAMLATLGAL
Subjt:  PALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAL

Query:  TVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLG
        +VEWLTGVTWQDAGKVELV+GSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELD EKRLYPGGK+FDPLGLAADPEK A LQLAEIKHARLAMVAFLG
Subjt:  TVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLG

Query:  FAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
        FAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Subjt:  FAVQAAATGKGPLNNWATHLSDPLHTTIIDTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTGGCCTTAAAGGATTTGCACCTGATGCTCTTCCGTGGGCTGGAGCAGAGCAAGAAAGAGGGAGAATCAAGGAGTATGAAAGCCCAAATCTAAGATGGATACA
CTCTCTTCATCCAACGCCCACCATTTCCCCACCAAACAGCCACCAAATTGTGGAAATTCCCCATATAACACCTCCAAATTCCAATCACCATTACATCAACCTCCCATCTC
CGCCATGGCAACCACCACAAACGCCGCCGCCGCCTCCTCCTTCATCGGAACCCGCCTCCCCGTCGCCCCATCCGGGTCGGGTCGAGCGCAAGCCCGATTCTCATTTGGAA
AAGGGAAACAAAAAGCCCACCGAAGAGATCGTCGAAGCCCAGCTCGGACCGCCCGCTCTGGTACCCGGGGCGGTGGCGCCGGAGTGGCTGGACGGGAGCTTGGTGGGGGA
CTATGGGTTCGACCCATTTGGGTTGGGGAAGCCGGCGGAGTACTTGCAGTTCGAGTTGGACTCGCTGGACCAGAACTTGGCGAAGAATGTGGCTGGCGATGTGATTGGGA
CTCGGTTCGAGAATGCGGATGTGAAATCGACGCCGTTTCAGCCGTACAGTGAGGTTTTTGGGTTGCAGAGGTTTCGTGAGTGCGAGCTCATCCATGGAAGGTGGGCTATG
TTGGCTACGCTTGGTGCTCTCACTGTTGAATGGCTCACCGGTGTTACCTGGCAAGACGCCGGAAAGGTAGAGCTGGTAGAAGGATCCTCATATCTTGGGCAGCCACTACC
ATTCTCAATATCAACATTGATATGGATCGAAGTTCTGGTAATTGGCTACATTGAGTTTCAACGAAACGCCGAGCTCGATCCCGAGAAGAGGCTTTACCCCGGGGGCAAGT
ACTTCGATCCCCTCGGCTTGGCAGCCGATCCCGAGAAGAAGGCGACGCTTCAATTGGCCGAGATCAAGCACGCTCGTCTCGCCATGGTTGCCTTCCTCGGCTTCGCTGTT
CAGGCCGCTGCCACGGGCAAAGGCCCGCTCAATAACTGGGCAACCCATCTGAGCGACCCGCTCCACACCACCATTATTGACACATTCTTCTTTTCATCCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGTGGCCTTAAAGGATTTGCACCTGATGCTCTTCCGTGGGCTGGAGCAGAGCAAGAAAGAGGGAGAATCAAGGAGTATGAAAGCCCAAATCTAAGATGGATACA
CTCTCTTCATCCAACGCCCACCATTTCCCCACCAAACAGCCACCAAATTGTGGAAATTCCCCATATAACACCTCCAAATTCCAATCACCATTACATCAACCTCCCATCTC
CGCCATGGCAACCACCACAAACGCCGCCGCCGCCTCCTCCTTCATCGGAACCCGCCTCCCCGTCGCCCCATCCGGGTCGGGTCGAGCGCAAGCCCGATTCTCATTTGGAA
AAGGGAAACAAAAAGCCCACCGAAGAGATCGTCGAAGCCCAGCTCGGACCGCCCGCTCTGGTACCCGGGGCGGTGGCGCCGGAGTGGCTGGACGGGAGCTTGGTGGGGGA
CTATGGGTTCGACCCATTTGGGTTGGGGAAGCCGGCGGAGTACTTGCAGTTCGAGTTGGACTCGCTGGACCAGAACTTGGCGAAGAATGTGGCTGGCGATGTGATTGGGA
CTCGGTTCGAGAATGCGGATGTGAAATCGACGCCGTTTCAGCCGTACAGTGAGGTTTTTGGGTTGCAGAGGTTTCGTGAGTGCGAGCTCATCCATGGAAGGTGGGCTATG
TTGGCTACGCTTGGTGCTCTCACTGTTGAATGGCTCACCGGTGTTACCTGGCAAGACGCCGGAAAGGTAGAGCTGGTAGAAGGATCCTCATATCTTGGGCAGCCACTACC
ATTCTCAATATCAACATTGATATGGATCGAAGTTCTGGTAATTGGCTACATTGAGTTTCAACGAAACGCCGAGCTCGATCCCGAGAAGAGGCTTTACCCCGGGGGCAAGT
ACTTCGATCCCCTCGGCTTGGCAGCCGATCCCGAGAAGAAGGCGACGCTTCAATTGGCCGAGATCAAGCACGCTCGTCTCGCCATGGTTGCCTTCCTCGGCTTCGCTGTT
CAGGCCGCTGCCACGGGCAAAGGCCCGCTCAATAACTGGGCAACCCATCTGAGCGACCCGCTCCACACCACCATTATTGACACATTCTTCTTTTCATCCTCTTGA
Protein sequenceShow/hide protein sequence
MTSGLKGFAPDALPWAGAEQERGRIKEYESPNLRWIHSLHPTPTISPPNSHQIVEIPHITPPNSNHHYINLPSPPWQPPQTPPPPPPSSEPASPSPHPGRVERKPDSHLE
KGNKKPTEEIVEAQLGPPALVPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYSEVFGLQRFRECELIHGRWAM
LATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAV
QAAATGKGPLNNWATHLSDPLHTTIIDTFFFSSS