; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027271 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027271
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein phosphatase 2 scaffold subunit Aalpha
Genome locationchr10:46366227..46368231
RNA-Seq ExpressionLag0027271
SyntenyLag0027271
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ORX76897.1 hypothetical protein BCR32DRAFT_270985 [Anaeromyces robustus]2.4e-0630.12Show/hide
Query:  NHSSGAYTLLGKAWGGLGSS-RSLFKHRGHPRGAYTLWGNAWRGLGSSRASLQTSWSSQGGAYTLLGKSLRRPRKF-PGLSSSIVVIPGVRTLFWGKAWG
        N     +  LG  W GLGS   SL          +   G+ W  LGS   SL + W+  G  +  LG        +  GL      + GV   F G  W 
Subjt:  NHSSGAYTLLGKAWGGLGSS-RSLFKHRGHPRGAYTLWGNAWRGLGSSRASLQTSWSSQGGAYTLLGKSLRRPRKF-PGLSSSIVVIPGVRTLFWGKAWG

Query:  GLGSSRASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGCVHSSGGKAWGGLGSSRASLQASWSSQ
        GLGS    L + W+  G  +  LG        + GL S   V  G+     G  W GLGS    L+  W+  G V +  G  W GLGS    L+  W+  
Subjt:  GLGSSRASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGCVHSSGGKAWGGLGSSRASLQASWSSQ

Query:  GGAYT-LLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGA
         G +  L G   G    + GL S   V  G+     G  W  LGS   SL+  W+  G+
Subjt:  GGAYT-LLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGA

XP_001946148.2 loricrin [Acyrthosiphon pisum]2.0e-0529.72Show/hide
Query:  SGPLFKHRNHSSGAYTLLGKAWGGLGSSRSLFKHRGHPRGAYTLWGNAWRGLGSS-RASLQTSWSSQGGAYTLLGKSLRRPRKFPGLSSSIVVIPGVRTL
        SG  +     SSG    LG ++GG GSS       G   G Y+  G +  GLG    AS  +S S  GG Y   G S        GL S    + G  + 
Subjt:  SGPLFKHRNHSSGAYTLLGKAWGGLGSSRSLFKHRGHPRGAYTLWGNAWRGLGSS-RASLQTSWSSQGGAYTLLGKSLRRPRKFPGLSSSIVVIPGVRTL

Query:  FWGKAWGGLGSSRASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGCVHSSGGKAWGGLGSSRASL
          G  +GG GSS   L   +   G +   +G   G      G         G  +   G  +GG G S + L +S+   G  +   G  +GGLGSS   L
Subjt:  FWGKAWGGLGSSRASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGCVHSSGGKAWGGLGSSRASL

Query:  QASWSSQGGAYTLLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGGLGSSRASLQASW-SSQGAYTLLGKSLGRPRKFPGLSSS
           +   GG+   +G   G      G   S     G  +   G  +GG GSS   L   + SS G+ + LG S G  R   G  SS
Subjt:  QASWSSQGGAYTLLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGGLGSSRASLQASW-SSQGAYTLLGKSLGRPRKFPGLSSS

TrEMBL top hitse value%identityAlignment
A0A1Y1WTN7 Uncharacterized protein1.2e-0630.12Show/hide
Query:  NHSSGAYTLLGKAWGGLGSS-RSLFKHRGHPRGAYTLWGNAWRGLGSSRASLQTSWSSQGGAYTLLGKSLRRPRKF-PGLSSSIVVIPGVRTLFWGKAWG
        N     +  LG  W GLGS   SL          +   G+ W  LGS   SL + W+  G  +  LG        +  GL      + GV   F G  W 
Subjt:  NHSSGAYTLLGKAWGGLGSS-RSLFKHRGHPRGAYTLWGNAWRGLGSSRASLQTSWSSQGGAYTLLGKSLRRPRKF-PGLSSSIVVIPGVRTLFWGKAWG

Query:  GLGSSRASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGCVHSSGGKAWGGLGSSRASLQASWSSQ
        GLGS    L + W+  G  +  LG        + GL S   V  G+     G  W GLGS    L+  W+  G V +  G  W GLGS    L+  W+  
Subjt:  GLGSSRASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGCVHSSGGKAWGGLGSSRASLQASWSSQ

Query:  GGAYT-LLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGA
         G +  L G   G    + GL S   V  G+     G  W  LGS   SL+  W+  G+
Subjt:  GGAYT-LLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGA

A0A663EW16 Protein phosphatase 2 scaffold subunit Aalpha1.4e-0429.86Show/hide
Query:  LGKAWGGLGSSRSLFKHRG-HPRGAYTLWGNA---WRGLGSSRASLQTSWSSQGGAYTLLGKSLR-RPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSR
        LG A  GL     +    G H  G    WG A   W  LG     L   W   G      G+ LR       G       + G  +L  G  W GLGS+ 
Subjt:  LGKAWGGLGSSRSLFKHRG-HPRGAYTLWGNA---WRGLGSSRASLQTSWSSQGGAYTLLGKSLR-RPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSR

Query:  ASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGCVHSSGGKAWGGLGSSRASLQASWSSQGGAYTL
          L   W S GG     GK       F G +       G R    G  W GLGS+  +LQAS    G +    GK W G+ +        W + GG Y+L
Subjt:  ASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGCVHSSGGKAWGGLGSSRASLQASWSSQGGAYTL

Query:  -LGK-----SLGRPRKFPG--LSSSIMVIPGVRTLFW--GKAWGGLGSSRASLQASWSSQGAYTLLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGG
         LG      S GR  +  G  L  +     GV    W  G+ W  LG S   L A W   G       S GR      L +S  V+ G      GK W G
Subjt:  -LGK-----SLGRPRKFPG--LSSSIMVIPGVRTLFW--GKAWGGLGSSRASLQASWSSQGAYTLLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGG

Query:  LGSSRASLRASWSSQGGAYTL-LGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAW
        + +        W + GG Y L LG   G      GL  S  V+ G      GK W
Subjt:  LGSSRASLRASWSSQGGAYTL-LGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAW

A0A663EX32 Protein phosphatase 2 scaffold subunit Aalpha1.4e-0429.86Show/hide
Query:  LGKAWGGLGSSRSLFKHRG-HPRGAYTLWGNA---WRGLGSSRASLQTSWSSQGGAYTLLGKSLR-RPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSR
        LG A  GL     +    G H  G    WG A   W  LG     L   W   G      G+ LR       G       + G  +L  G  W GLGS+ 
Subjt:  LGKAWGGLGSSRSLFKHRG-HPRGAYTLWGNA---WRGLGSSRASLQTSWSSQGGAYTLLGKSLR-RPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSR

Query:  ASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGCVHSSGGKAWGGLGSSRASLQASWSSQGGAYTL
          L   W S GG     GK       F G +       G R    G  W GLGS+  +LQAS    G +    GK W G+ +        W + GG Y+L
Subjt:  ASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGCVHSSGGKAWGGLGSSRASLQASWSSQGGAYTL

Query:  -LGK-----SLGRPRKFPG--LSSSIMVIPGVRTLFW--GKAWGGLGSSRASLQASWSSQGAYTLLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGG
         LG      S GR  +  G  L  +     GV    W  G+ W  LG S   L A W   G       S GR      L +S  V+ G      GK W G
Subjt:  -LGK-----SLGRPRKFPG--LSSSIMVIPGVRTLFW--GKAWGGLGSSRASLQASWSSQGAYTLLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGG

Query:  LGSSRASLRASWSSQGGAYTL-LGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAW
        + +        W + GG Y L LG   G      GL  S  V+ G      GK W
Subjt:  LGSSRASLRASWSSQGGAYTL-LGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAW

J9JP29 Autotransporter domain-containing protein9.8e-0629.72Show/hide
Query:  SGPLFKHRNHSSGAYTLLGKAWGGLGSSRSLFKHRGHPRGAYTLWGNAWRGLGSS-RASLQTSWSSQGGAYTLLGKSLRRPRKFPGLSSSIVVIPGVRTL
        SG  +     SSG    LG ++GG GSS       G   G Y+  G +  GLG    AS  +S S  GG Y   G S        GL S    + G  + 
Subjt:  SGPLFKHRNHSSGAYTLLGKAWGGLGSSRSLFKHRGHPRGAYTLWGNAWRGLGSS-RASLQTSWSSQGGAYTLLGKSLRRPRKFPGLSSSIVVIPGVRTL

Query:  FWGKAWGGLGSSRASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGCVHSSGGKAWGGLGSSRASL
          G  +GG GSS   L   +   G +   +G   G      G         G  +   G  +GG G S + L +S+   G  +   G  +GGLGSS   L
Subjt:  FWGKAWGGLGSSRASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGCVHSSGGKAWGGLGSSRASL

Query:  QASWSSQGGAYTLLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGGLGSSRASLQASW-SSQGAYTLLGKSLGRPRKFPGLSSS
           +   GG+   +G   G      G   S     G  +   G  +GG GSS   L   + SS G+ + LG S G  R   G  SS
Subjt:  QASWSSQGGAYTLLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGGLGSSRASLQASW-SSQGAYTLLGKSLGRPRKFPGLSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAATGTTGGGCCTTTGAGGGTGGAGCTCGGCCTTGGCCTCTGGATGGTCGAACTCGGCCTTGGCATGAGGTCGACCAACTCCTCTGCGTTGTTTGCTTGCTTGT
TTTCCATCCCAAGGATGCCTGCACTCAGTCCGGGCCTCTCTTCAAGCATCGTAATCATTCCAGTGGTGCGTACACTCTTTTGGGGAAAGCTTGGGGAGGCCTAGGAAGTT
CCCGGTCCCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGTACACTCTCTGGGGAAATGCTTGGAGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAACATCATGGTCA
TCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGAGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGTACACTCTTCTG
GGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCATGGTCATCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGA
AGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCA
TGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCATGGTCATCCCAGGGGGGTGCGTACAC
TCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCC
TAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGC
ATCATGGTCATCCCAGGGGTGCGTACACTCTTTTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCGAGCATCGTGGTCATCCCAGGGGGGTGCGTA
CACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGAATC
TCATCCCGAGGGTGCGTACACTCAGTCGAGGTCTTGGAATCTCATCTCGAGGGTGCGTACACTCAGTCGAGGTCTTGGAATTTCATCTCGACGGTGCGTACACTCGATCG
AGGGCTTTGAAGGACCCAACCTCTGCAAGGCCCCCTACTCAAGCAAGGTTTTTCTCGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAATGTTGGGCCTTTGAGGGTGGAGCTCGGCCTTGGCCTCTGGATGGTCGAACTCGGCCTTGGCATGAGGTCGACCAACTCCTCTGCGTTGTTTGCTTGCTTGT
TTTCCATCCCAAGGATGCCTGCACTCAGTCCGGGCCTCTCTTCAAGCATCGTAATCATTCCAGTGGTGCGTACACTCTTTTGGGGAAAGCTTGGGGAGGCCTAGGAAGTT
CCCGGTCCCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGTACACTCTCTGGGGAAATGCTTGGAGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAACATCATGGTCA
TCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGAGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGTACACTCTTCTG
GGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCATGGTCATCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGA
AGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCA
TGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCATGGTCATCCCAGGGGGGTGCGTACAC
TCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCC
TAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGC
ATCATGGTCATCCCAGGGGTGCGTACACTCTTTTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCGAGCATCGTGGTCATCCCAGGGGGGTGCGTA
CACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGAATC
TCATCCCGAGGGTGCGTACACTCAGTCGAGGTCTTGGAATCTCATCTCGAGGGTGCGTACACTCAGTCGAGGTCTTGGAATTTCATCTCGACGGTGCGTACACTCGATCG
AGGGCTTTGAAGGACCCAACCTCTGCAAGGCCCCCTACTCAAGCAAGGTTTTTCTCGAAGTAA
Protein sequenceShow/hide protein sequence
MEKCWAFEGGARPWPLDGRTRPWHEVDQLLCVVCLLVFHPKDACTQSGPLFKHRNHSSGAYTLLGKAWGGLGSSRSLFKHRGHPRGAYTLWGNAWRGLGSSRASLQTSWS
SQGGAYTLLGKSLRRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWGGLGSSRASLQAS
WSSQGCVHSSGGKAWGGLGSSRASLQASWSSQGGAYTLLGKSLGRPRKFPGLSSSIMVIPGVRTLFWGKAWGGLGSSRASLQASWSSQGAYTLLGKSLGRPRKFPGLSSS
IMVIPGVRTLFWGKAWGGLGSSRASLRASWSSQGGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRTLFWGKAWNLIPRVRTLSRGLGISSRGCVHSVEVLEFHLDGAYTRS
RALKDPTSARPPTQARFFSK