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Lag0027326 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027326
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr10:46729320..46729928
RNA-Seq ExpressionLag0027326
SyntenyLag0027326
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6700691.1 hypothetical protein I3842_08G125100 [Carya illinoinensis]2.1e-1529.26Show/hide
Query:  CPLCLNYPEDSDHCLFVCSRAREIWNLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFLR
        CP+CL   E ++H L+ C  AR++W L+ RK          FV+ +  + DSL  EE+   A+T W+IW  RNKV+        +I  Q     +E+ L+
Subjt:  CPLCLNYPEDSDHCLFVCSRAREIWNLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFLR

Query:  ANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHN-RWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAASCLYEEVY
         + K                   + +   Q     +HN  W  PP    K+N D S     C +G G I+RDWE K+ A   + ++++
Subjt:  ANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHN-RWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAASCLYEEVY

XP_022145060.1 uncharacterized protein LOC111014578 [Momordica charantia]6.1e-2332.22Show/hide
Query:  CPLCLNYPEDSDHCLFVCSRAREIWNLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFLR
        C +C    E +DH LF C RA+E+WN+   +A+ + DF  S  D  + + +SLS  +  L  V +W+IWNDRN +     IPDA IRS WI++Y+ +F  
Subjt:  CPLCLNYPEDSDHCLFVCSRAREIWNLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFLR

Query:  ANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAAS
           +   +PS         +   +++  +  N   + N W PPP    K+N D +        G G++ R+ +G++ AA+
Subjt:  ANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAAS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.0e-1430.53Show/hide
Query:  LNLCPLCLNYPEDSDHCLFVCSRAREIWN-----LTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWII
        L  C +C +  E   H  F C RAR+IW      LTC  A  E++   SF++ W  + + L  ++L LAA+T W IWNDRN +I+ + +     + +W+ 
Subjt:  LNLCPLCLNYPEDSDHCLFVCSRAREIWN-----LTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWII

Query:  SYLEEFLRANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAASCL
         +L+   +A   N   P + SN R                  PV   W P      KLNTD +   +  S G   I+RD    + AA+ +
Subjt:  SYLEEFLRANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAASCL

XP_042950258.1 uncharacterized protein LOC122282367 [Carya illinoinensis]2.3e-1428.89Show/hide
Query:  LCPLCLNYPEDSDHCLFVCSRAREIWNLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFL
        LCP+C   PE   H L+ C+  +++W L+ RK         SF + W+ +   L  +EL   A T++ IW  RN ++      D         + + EFL
Subjt:  LCPLCLNYPEDSDHCLFVCSRAREIWNLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFL

Query:  RANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAA
         AN       +S++ Q G  +N+S            VH+ W PPP  ++K N D +       +G G+++RDWEG++  +
Subjt:  RANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAA

XP_042969075.1 uncharacterized protein LOC122301758 [Carya illinoinensis]1.4e-1427.78Show/hide
Query:  LCPLCLNYPEDSDHCLFVCSRAREIWNLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFL
        LCP+C   PE   H L+ C+  +++W ++ RK         SF + W  +   L  EEL   A T++ IW  RN ++ +    D     +   S + EF 
Subjt:  LCPLCLNYPEDSDHCLFVCSRAREIWNLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFL

Query:  RANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAA
         AN   + +                   +  ++S+P+   W PPP N +K N D +       +GAG+++RDWEG+  A+
Subjt:  RANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAA

TrEMBL top hitse value%identityAlignment
A0A2K2DET2 RNase H domain-containing protein2.1e-1327.08Show/hide
Query:  MNILNLCPLCLNYPEDSDHCLFVCSRAREIWN--LTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWII
        + +L++CP+C    E S H L  C  AR +W    TC     E +   S  +    +    +  ++ +  +T+W IW+  N+  +++P       ++++ 
Subjt:  MNILNLCPLCLNYPEDSDHCLFVCSRAREIWN--LTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWII

Query:  SYLEEFLRANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVH---NRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAASC
        SYL+  L   H  D     S   +G       V  SS+ +  P +    +W+PP  N+ KLN D S    +   G G+ LRD +G++ AA+C
Subjt:  SYLEEFLRANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVH---NRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAASC

A0A6J1BQ49 uncharacterized protein LOC1110047861.5e-1430.51Show/hide
Query:  EDSDHCLFVCSRAREIWNLTCRKAYLEE-DFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFLRANHKNDP
        E + H + +C RA++IWNL     +    +   SF+D W+ + D L+ ++  LAA T W+IW DRN   +   +    +R  WI SY + + +A      
Subjt:  EDSDHCLFVCSRAREIWNLTCRKAYLEE-DFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFLRANHKNDP

Query:  IPSSSSNQRGHLVNRSQVESSSQQNSLPVHN-RWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAASCLY
              N+R           S QQ+S+P  + RW+PP  +  K+N+D +      S G GLI+RD  G +  A  ++
Subjt:  IPSSSSNQRGHLVNRSQVESSSQQNSLPVHN-RWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAASCLY

A0A6J1CTE3 uncharacterized protein LOC1110145783.0e-2332.22Show/hide
Query:  CPLCLNYPEDSDHCLFVCSRAREIWNLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFLR
        C +C    E +DH LF C RA+E+WN+   +A+ + DF  S  D  + + +SLS  +  L  V +W+IWNDRN +     IPDA IRS WI++Y+ +F  
Subjt:  CPLCLNYPEDSDHCLFVCSRAREIWNLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFLR

Query:  ANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAAS
           +   +PS         +   +++  +  N   + N W PPP    K+N D +        G G++ R+ +G++ AA+
Subjt:  ANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAAS

A0A6J1DX30 uncharacterized protein LOC1110248741.5e-1430.53Show/hide
Query:  LNLCPLCLNYPEDSDHCLFVCSRAREIWN-----LTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWII
        L  C +C +  E   H  F C RAR+IW      LTC  A  E++   SF++ W  + + L  ++L LAA+T W IWNDRN +I+ + +     + +W+ 
Subjt:  LNLCPLCLNYPEDSDHCLFVCSRAREIWN-----LTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWII

Query:  SYLEEFLRANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAASCL
         +L+   +A   N   P + SN R                  PV   W P      KLNTD +   +  S G   I+RD    + AA+ +
Subjt:  SYLEEFLRANHKNDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAASCL

A0A803Q8I6 Uncharacterized protein2.8e-1330.6Show/hide
Query:  CPLCLNYPEDSDHCLFVCSRAREIW---NLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEE
        C LC N  E   H LF C++AR++W     T    +    + G ++   I ++   S ++  L   TMW+IW+DRNKVI       + + + +  ++LE+
Subjt:  CPLCLNYPEDSDHCLFVCSRAREIW---NLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEE

Query:  FLRANHKNDPIPSSSSNQRGHLVNRS-QVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAA
        + RA  KN        N   H  N S  V    Q + +P    W PP  +  K+N D+        LG G I+RD +G + AA
Subjt:  FLRANHKNDPIPSSSSNQRGHLVNRS-QVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATCCTTAATCTTTGTCCTCTCTGCCTTAATTATCCGGAAGATTCTGACCATTGTCTTTTTGTTTGTTCTCGAGCGAGGGAGATTTGGAATCTAACATGTAGAAA
AGCTTACCTGGAGGAAGACTTCAGAGGGAGCTTTGTAGACAGATGGATAAAGATCAACGATAGCTTGTCTTTGGAGGAGCTAGGTCTAGCTGCGGTTACAATGTGGTCGA
TCTGGAACGATAGGAACAAGGTTATAAATAATGAACCTATTCCGGATGCAAATATAAGAAGCCAGTGGATTATCAGTTACCTGGAGGAATTCTTGAGGGCGAATCACAAA
AACGATCCCATTCCGTCTTCATCCTCTAATCAGCGTGGCCATTTGGTGAATCGGAGTCAGGTTGAGTCTTCTTCTCAGCAAAATAGCCTCCCTGTGCATAATCGATGGGT
TCCTCCGCCATGCAATATCTGGAAGCTTAATACGGACATGTCTAAGGTTCCATCTCATTGTTCGCTTGGAGCAGGACTGATTTTGAGAGATTGGGAAGGGAAAATGACTG
CAGCATCGTGTCTTTATGAAGAAGTTTATTGGGTTAACCACAAGAATGGCCATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATATCCTTAATCTTTGTCCTCTCTGCCTTAATTATCCGGAAGATTCTGACCATTGTCTTTTTGTTTGTTCTCGAGCGAGGGAGATTTGGAATCTAACATGTAGAAA
AGCTTACCTGGAGGAAGACTTCAGAGGGAGCTTTGTAGACAGATGGATAAAGATCAACGATAGCTTGTCTTTGGAGGAGCTAGGTCTAGCTGCGGTTACAATGTGGTCGA
TCTGGAACGATAGGAACAAGGTTATAAATAATGAACCTATTCCGGATGCAAATATAAGAAGCCAGTGGATTATCAGTTACCTGGAGGAATTCTTGAGGGCGAATCACAAA
AACGATCCCATTCCGTCTTCATCCTCTAATCAGCGTGGCCATTTGGTGAATCGGAGTCAGGTTGAGTCTTCTTCTCAGCAAAATAGCCTCCCTGTGCATAATCGATGGGT
TCCTCCGCCATGCAATATCTGGAAGCTTAATACGGACATGTCTAAGGTTCCATCTCATTGTTCGCTTGGAGCAGGACTGATTTTGAGAGATTGGGAAGGGAAAATGACTG
CAGCATCGTGTCTTTATGAAGAAGTTTATTGGGTTAACCACAAGAATGGCCATGATTAA
Protein sequenceShow/hide protein sequence
MNILNLCPLCLNYPEDSDHCLFVCSRAREIWNLTCRKAYLEEDFRGSFVDRWIKINDSLSLEELGLAAVTMWSIWNDRNKVINNEPIPDANIRSQWIISYLEEFLRANHK
NDPIPSSSSNQRGHLVNRSQVESSSQQNSLPVHNRWVPPPCNIWKLNTDMSKVPSHCSLGAGLILRDWEGKMTAASCLYEEVYWVNHKNGHD