CuGenDBv2

Gene ID	Lag0027338
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	ATP-dependent helicase/deoxyribonuclease subunit B
Genome location	chr10:46788014..46796346
RNA-Seq Expression	Lag0027338
Synteny	Lag0027338
Gene Ontology terms	GO:0006979 - response to oxidative stress (biological process) GO:0009555 - pollen development (biological process) GO:0005886 - plasma membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004137681.1 uncharacterized protein LOC101203220 [Cucumis sativus]

8.7e-116

94.95

Show/hide

Query:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M +PPIL LL+SLLSL+PI LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPI+GVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV
        AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIY DTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTL+ ILS+YILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

XP_008442332.1 PREDICTED: uncharacterized protein LOC103486235 isoform X2 [Cucumis melo]

2.7e-117

96.33

Show/hide

Query:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M  PPIL LL+SLLSL+PISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV
        AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHI+KQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTL+ ILSIYILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

XP_022971506.1 uncharacterized protein LOC111470204 [Cucurbita maxima]

4.8e-114

94.04

Show/hide

Query:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M EPP LLLLVSL SLIP  LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV
        A+VPMIDVHLRYSGSDLHGVTAKV+DMPHIY D+HPHIS+QFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGL LT ILSIYILQSSK+KLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

XP_023541018.1 uncharacterized protein LOC111801222 [Cucurbita pepo subsp. pepo]

4.8e-114

94.04

Show/hide

Query:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M EPP LLLLVSL SLIP  LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV
        A+VPMIDVHLRYSGSDLHGVTAKV+DMPHIY D+HPHIS+QFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGL LT ILSIYILQSSK+KLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

XP_038903796.1 uncharacterized protein LOC120090293 isoform X1 [Benincasa hispida]

6.6e-116

95.41

Show/hide

Query:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M EPPIL LLVSLLSL+PISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINR+S
Subjt:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV
        AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISK+FWDQQHWPKHILVRYTWEEQSEIDV SGLYVLFGSGLTL+ ILSI+ILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIP VGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9R0 Uncharacterized protein

4.2e-116

94.95

Show/hide

Query:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M +PPIL LL+SLLSL+PI LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPI+GVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV
        AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIY DTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTL+ ILS+YILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

A0A1S3B641 uncharacterized protein LOC103486235 isoform X2

1.3e-117

96.33

Show/hide

Query:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M  PPIL LL+SLLSL+PISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV
        AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHI+KQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTL+ ILSIYILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

A0A5A7TLX6 Uncharacterized protein

1.3e-117

96.33

Show/hide

Query:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M  PPIL LL+SLLSL+PISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV
        AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHI+KQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTL+ ILSIYILQSSKDKLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

A0A6J1EYS2 uncharacterized protein LOC111440559

3.9e-114

94.04

Show/hide

Query:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M EPP LLLLVSL SLIP  LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV
        A+VPMIDVHLRYSGSDLHGVTAKV+DMPHIY D+HPHIS+QFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGL LT ILSIYILQSSK+KLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

A0A6J1I3H9 uncharacterized protein LOC111470204

2.3e-114

94.04

Show/hide

Query:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
        M EPP LLLLVSL SLIP  LAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS
Subjt:  MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKS

Query:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV
        A+VPMIDVHLRYSGSDLHGVTAKV+DMPHIY D+HPHIS+QFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGL LT ILSIYILQSSK+KLARFV
Subjt:  AEVPMIDVHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFV

Query:  RETVVESSIPGVGVAKVE
        RETVVESSIPGVGVAKVE
Subjt:  RETVVESSIPGVGVAKVE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51610.1 unknown protein

2.7e-91

76.7

Show/hide

Query:  LLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMID
        L+L+S LS   +S AYRPGDIV MSKMGQYHSSRT WHD+IG+HCPIF VNREVL+PI KP+GYTG DPYKI FQVG EKFL+ WLLVINRKS+EVPMID
Subjt:  LLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMID

Query:  VHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFVRETVVES
        V+LRYSG DL GVTA+V+DMPH Y +THP I KQFWD QHWPKH+LVRYTW+EQSEIDV+SG YVLFGS LT + +LSIY+LQSS++KLARFVRETVVES
Subjt:  VHLRYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFVRETVVES

Query:  SIPGVG
        S   VG
Subjt:  SIPGVG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGAACCTCCAATTCTGTTGCTCCTGGTTTCGCTATTGTCGCTGATTCCGATTTCGCTGGCTTACAGGCCTGGAGACATCGTTCCGATGAGCAAGATGGGACAGTA
TCACTCGTCGAGAACAGTTTGGCACGATATGATCGGTCGACATTGTCCAATTTTTGGCGTCAATCGCGAGGTTTTGGTGCCTATACCGAAGCCGGTCGGCTACACGGGAG
CTGATCCGTATAAAATATCCTTTCAAGTGGGAAAAGAAAAGTTTCTTGTCCCATGGCTTCTTGTGATAAATCGCAAAAGTGCAGAAGTCCCAATGATTGATGTCCACTTG
AGATACTCTGGAAGTGATCTTCATGGTGTGACTGCCAAAGTAGTGGACATGCCTCATATATATACTGATACTCATCCACATATTAGCAAACAATTCTGGGATCAACAACA
TTGGCCAAAGCATATCCTTGTCCGTTATACATGGGAGGAGCAATCAGAGATTGACGTGACTTCCGGATTATATGTTTTGTTCGGATCAGGTCTCACACTGACTTTGATTC
TGTCAATTTACATCTTGCAATCATCGAAAGACAAGTTGGCAAGGTTTGTAAGAGAAACAGTAGTTGAAAGCAGCATTCCTGGCGTAGGAGTGGCAAAAGTTGAATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEEPPILLLLVSLLSLIPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHL
RYSGSDLHGVTAKVVDMPHIYTDTHPHISKQFWDQQHWPKHILVRYTWEEQSEIDVTSGLYVLFGSGLTLTLILSIYILQSSKDKLARFVRETVVESSIPGVGVAKVE

Lag0027338 (gene) of Sponge gourd (AG-4) v1 genome