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Lag0027349 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027349
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPPR_long domain-containing protein
Genome locationchr10:46869031..46869396
RNA-Seq ExpressionLag0027349
SyntenyLag0027349
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580428.1 hypothetical protein SDJN03_20430, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4180.65Show/hide
Query:  MAVVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTG--SGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILER--K
        MAVVKKFGDEHSNLLDQYER SFEARLNQA+LGRSLSEP+T+RSQ Q     S SGSVR+P LV TT+++QPRKG RGSTFNFNKIINKLLKPIL R  K
Subjt:  MAVVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTG--SGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILER--K

Query:  SRAKKELPDFKNPMSWKAFSKSMR
        SRAKKELPDF+NP+SWKA SKSMR
Subjt:  SRAKKELPDFKNPMSWKAFSKSMR

OAY41638.1 hypothetical protein MANES_09G117900v8 [Manihot esculenta]1.1e-2257.63Show/hide
Query:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSRAKKE
        ++K+FGDE S LLDQ+ERL+FE +LNQA+LGRSLSEP   RS+ Q+  +G      P LV  T   Q R+ RRGS   FNK++ KLLKPI  RK  AKKE
Subjt:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSRAKKE

Query:  LPDFKNPMSWKAFSKSMR
        + D KNP SWKAFS+S+R
Subjt:  LPDFKNPMSWKAFSKSMR

XP_042940573.1 uncharacterized protein LOC122275540 isoform X1 [Carya illinoinensis]5.9e-2152.89Show/hide
Query:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSR---A
        V++KFGDE S LLD++ERLSFE +LNQA+LGRS SEP   R Q  L G G      P         Q ++GRRGS   F+K++ K LKPIL RKSR   +
Subjt:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSR---A

Query:  KKELPDFKNPMSWKAFSKSMR
        + +LPD +NP SWKAFS+S+R
Subjt:  KKELPDFKNPMSWKAFSKSMR

XP_042940574.1 uncharacterized protein LOC122275540 isoform X2 [Carya illinoinensis]5.9e-2152.89Show/hide
Query:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSR---A
        V++KFGDE S LLD++ERLSFE +LNQA+LGRS SEP   R Q  L G G      P         Q ++GRRGS   F+K++ K LKPIL RKSR   +
Subjt:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSR---A

Query:  KKELPDFKNPMSWKAFSKSMR
        + +LPD +NP SWKAFS+S+R
Subjt:  KKELPDFKNPMSWKAFSKSMR

XP_042940575.1 uncharacterized protein LOC122275540 isoform X3 [Carya illinoinensis]5.9e-2152.89Show/hide
Query:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSR---A
        V++KFGDE S LLD++ERLSFE +LNQA+LGRS SEP   R Q  L G G      P         Q ++GRRGS   F+K++ K LKPIL RKSR   +
Subjt:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSR---A

Query:  KKELPDFKNPMSWKAFSKSMR
        + +LPD +NP SWKAFS+S+R
Subjt:  KKELPDFKNPMSWKAFSKSMR

TrEMBL top hitse value%identityAlignment
A0A061EIG2 Uncharacterized protein3.5e-1952.85Show/hide
Query:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEP----KTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERK-S
        ++++FGDE S LLD++ERLSFE +LNQA+LGRSLSEP    +T+ SQ Q           P  V        RKGRRGS   FN+++ KLLKPIL RK S
Subjt:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEP----KTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERK-S

Query:  RAKKELPDFKNPMSWKAFSKSMR
          +K + D KNPMSWKAFS+S+R
Subjt:  RAKKELPDFKNPMSWKAFSKSMR

A0A1J7H346 Uncharacterized protein5.9e-1951.72Show/hide
Query:  KKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSRAKKELP
        K+FGDE S LLDQ+ERLSFEA LN+AM  RSLSEP   RS TQ     + +  +P +VT     Q + G+R S   F K++  LLKPIL RK   +K +P
Subjt:  KKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSRAKKELP

Query:  DFKNPMSWKAFSKSMR
        D K+P+SWK FS+S+R
Subjt:  DFKNPMSWKAFSKSMR

A0A2C9VA13 Uncharacterized protein5.2e-2357.63Show/hide
Query:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSRAKKE
        ++K+FGDE S LLDQ+ERL+FE +LNQA+LGRSLSEP   RS+ Q+  +G      P LV  T   Q R+ RRGS   FNK++ KLLKPI  RK  AKKE
Subjt:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSRAKKE

Query:  LPDFKNPMSWKAFSKSMR
        + D KNP SWKAFS+S+R
Subjt:  LPDFKNPMSWKAFSKSMR

A0A6A5MZV5 Uncharacterized protein5.9e-1954.31Show/hide
Query:  KKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSRAKKELP
        K+FGDE S LLDQ+ERLSFEA LN+AML RSLSEP   RS+   T + S    +P +VT     Q  +G+R S   F K++ KLLKPIL RKS  +K++ 
Subjt:  KKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSRAKKELP

Query:  DFKNPMSWKAFSKSMR
        D KNP+SWK FS+S+R
Subjt:  DFKNPMSWKAFSKSMR

A0A7J0E7R3 Uncharacterized protein1.3e-1847.46Show/hide
Query:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSRAKKE
        ++K+FGDE S LLDQ+ERL+FEA+L++A+LGRSLSEP + R+Q  L       +  P             GRRG+   F K++  LLKPIL R+   +KE
Subjt:  VVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSRAKKE

Query:  LPDFKNPMSWKAFSKSMR
         PD K+P  WK+FS+SMR
Subjt:  LPDFKNPMSWKAFSKSMR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTGGTTAAGAAATTTGGGGATGAACACAGCAACTTGTTGGACCAATATGAGAGACTGAGCTTTGAAGCACGACTAAACCAGGCGATGCTGGGGCGGAGTCTTTC
GGAGCCGAAGACAATGAGGTCTCAAACTCAACTTACTGGCTCAGGCTCTGGCTCAGTTCGAGTACCATACTTGGTAACAACAACAACTACGCATCAGCCTAGAAAAGGAC
GCCGTGGATCCACCTTCAACTTCAACAAGATTATCAACAAGTTACTCAAACCCATTTTGGAGAGAAAGAGTAGGGCAAAGAAGGAACTTCCAGATTTCAAAAACCCCATG
TCTTGGAAAGCCTTCAGTAAATCCATGCGCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTGGTTAAGAAATTTGGGGATGAACACAGCAACTTGTTGGACCAATATGAGAGACTGAGCTTTGAAGCACGACTAAACCAGGCGATGCTGGGGCGGAGTCTTTC
GGAGCCGAAGACAATGAGGTCTCAAACTCAACTTACTGGCTCAGGCTCTGGCTCAGTTCGAGTACCATACTTGGTAACAACAACAACTACGCATCAGCCTAGAAAAGGAC
GCCGTGGATCCACCTTCAACTTCAACAAGATTATCAACAAGTTACTCAAACCCATTTTGGAGAGAAAGAGTAGGGCAAAGAAGGAACTTCCAGATTTCAAAAACCCCATG
TCTTGGAAAGCCTTCAGTAAATCCATGCGCAATTGA
Protein sequenceShow/hide protein sequence
MAVVKKFGDEHSNLLDQYERLSFEARLNQAMLGRSLSEPKTMRSQTQLTGSGSGSVRVPYLVTTTTTHQPRKGRRGSTFNFNKIINKLLKPILERKSRAKKELPDFKNPM
SWKAFSKSMRN