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Lag0027395 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027395
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:117169..117543
RNA-Seq ExpressionLag0027395
SyntenyLag0027395
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TQD93576.1 hypothetical protein C1H46_020784 [Malus baccata]1.9e-1942.97Show/hide
Query:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGN--RIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLIS---NK
        ++KWLWRF KE +SLW KVI S YG+   G   N F   +G+    W DI +   +F  C K  V NG+ ++FWED W +  PLK  FP LFL+S   N+
Subjt:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGN--RIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLIS---NK

Query:  KEAAIADCWNFESLTWDLAFRRGLFERD
          ++ AD ++  SL+W+  FRR L E +
Subjt:  KEAAIADCWNFESLTWDLAFRRGLFERD

TYK07811.1 hypothetical protein E5676_scaffold1737G001050 [Cucumis melo var. makuwa]1.7e-2045.19Show/hide
Query:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI
        ++KWLWRFSKE+N+LWR +IV+IYG+   G  T      +  R+W  I  +   F       +  G  IKFW+D WCD QPL   FP LF +S  K A +
Subjt:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI

Query:  ADCW
        ADCW
Subjt:  ADCW

XP_022149391.1 uncharacterized protein LOC111017819 [Momordica charantia]2.3e-2045.45Show/hide
Query:  KWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAIAD
        KWLWRFS+E  +LWRKVI SIYG+ P G      KGK                          G  I+FW D W  +  L   FPDL+ IS KKEA +AD
Subjt:  KWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAIAD

Query:  CWNFESLTWDLAFRRGLFERD
        CW+    TWDL FRRGLF+R+
Subjt:  CWNFESLTWDLAFRRGLFERD

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]6.6e-2847.93Show/hide
Query:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI
        + KWLW F++EEN+LWR+VI SIYG+   G  T   KGK   R W DI  N   F   +    N G  + FW D W  + PL   FPD+F +S K+ A +
Subjt:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI

Query:  ADCWNFESLTWDLAFRRGLFE
         DCWN E+ TWDLA RRGLF+
Subjt:  ADCWNFESLTWDLAFRRGLFE

XP_022899438.1 uncharacterized protein LOC111412753 [Olea europaea var. sylvestris]1.7e-2039.67Show/hide
Query:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI
        + KWLWRF  E +S WR++I + YG++  G  T + +G  G  +W  I   +  F   +K  V NG  IKFW+DCWC DQPLK  FP L+ I++   A +
Subjt:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI

Query:  ADCWNFE--SLTWDLAFRRGL
        +D  +    S +W++ F R L
Subjt:  ADCWNFE--SLTWDLAFRRGL

TrEMBL top hitse value%identityAlignment
A0A2N9FVR5 Reverse transcriptase domain-containing protein6.5e-2139.84Show/hide
Query:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI
        + KWLWR+  +  + WR+V+ + YG    G  +N  +G  G  +W +I   +  F   + L V NG+ I+FW D WC ++PLK  +PDLF I+  K+AAI
Subjt:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI

Query:  ADCWNFES--LTWDLAFRRGLFE
        A+  +FES  L WDL+F R + +
Subjt:  ADCWNFES--LTWDLAFRRGLFE

A0A2N9GCK8 Reverse transcriptase domain-containing protein8.4e-2141.32Show/hide
Query:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI
        + KWLWR+S E  SLWR+VI S YG       +N+     G  +W  I A + +F   I  TV +G  ++FW D WC D+PL+ LFP LF ++   EA +
Subjt:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI

Query:  ADCWNFE--SLTWDLAFRRGL
        AD  +F+  S  WD+AF R +
Subjt:  ADCWNFE--SLTWDLAFRRGL

A0A2N9IB59 Reverse transcriptase domain-containing protein8.4e-2141.32Show/hide
Query:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI
        + KWLWR+S E  SLWR+VI S YG       +N+     G  +W  I A + +F   I  TV +G  ++FW D WC D+PL+ LFP LF ++   EA +
Subjt:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI

Query:  ADCWNFE--SLTWDLAFRRGL
        AD  +F+  S  WD+AF R +
Subjt:  ADCWNFE--SLTWDLAFRRGL

A0A5D3C7F0 Uncharacterized protein8.4e-2145.19Show/hide
Query:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI
        ++KWLWRFSKE+N+LWR +IV+IYG+   G  T      +  R+W  I  +   F       +  G  IKFW+D WCD QPL   FP LF +S  K A +
Subjt:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI

Query:  ADCW
        ADCW
Subjt:  ADCW

A0A6J1E196 uncharacterized protein LOC1110250193.2e-2847.93Show/hide
Query:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI
        + KWLW F++EEN+LWR+VI SIYG+   G  T   KGK   R W DI  N   F   +    N G  + FW D W  + PL   FPD+F +S K+ A +
Subjt:  MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAI

Query:  ADCWNFESLTWDLAFRRGLFE
         DCWN E+ TWDLA RRGLF+
Subjt:  ADCWNFESLTWDLAFRRGLFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAGTGGCTATGGAGGTTCTCTAAGGAGGAAAATTCGCTTTGGAGGAAGGTTATTGTTAGCATTTATGGGATATCTCCCTGTGGTCGTAAGACCAATCAGTTTAA
AGGAAAAAAAGGGAATCGGATTTGGGTAGACATTCCCGCCAACTACCCTATTTTTTACCCTTGTATTAAACTCACGGTCAACAATGGTAAGTGCATAAAATTCTGGGAGG
ACTGTTGGTGCGATGACCAACCCCTCAAGCTCCTCTTCCCAGACTTGTTCCTCATTTCTAATAAAAAGGAGGCTGCCATTGCTGATTGCTGGAATTTTGAGTCCCTGACG
TGGGATTTGGCTTTTAGAAGGGGTCTCTTTGAGAGAGATCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCAAGTGGCTATGGAGGTTCTCTAAGGAGGAAAATTCGCTTTGGAGGAAGGTTATTGTTAGCATTTATGGGATATCTCCCTGTGGTCGTAAGACCAATCAGTTTAA
AGGAAAAAAAGGGAATCGGATTTGGGTAGACATTCCCGCCAACTACCCTATTTTTTACCCTTGTATTAAACTCACGGTCAACAATGGTAAGTGCATAAAATTCTGGGAGG
ACTGTTGGTGCGATGACCAACCCCTCAAGCTCCTCTTCCCAGACTTGTTCCTCATTTCTAATAAAAAGGAGGCTGCCATTGCTGATTGCTGGAATTTTGAGTCCCTGACG
TGGGATTTGGCTTTTAGAAGGGGTCTCTTTGAGAGAGATCAATAG
Protein sequenceShow/hide protein sequence
MSKWLWRFSKEENSLWRKVIVSIYGISPCGRKTNQFKGKKGNRIWVDIPANYPIFYPCIKLTVNNGKCIKFWEDCWCDDQPLKLLFPDLFLISNKKEAAIADCWNFESLT
WDLAFRRGLFERDQ