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Lag0027399 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027399
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr8:180626..183949
RNA-Seq ExpressionLag0027399
SyntenyLag0027399
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]3.2e-2638.66Show/hide
Query:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH----------------------------------------
        MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++                                         
Subjt:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH----------------------------------------

Query:  -TISNC--EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYGTFGPLGVCPLEVDF
         T++    EF F   YWEWLE VVGR+  +L++ RL  AV ASLY Y+RN+D+VRAFCEAWCP+TNTLHT AGEL          G  P++ DF
Subjt:  -TISNC--EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYGTFGPLGVCPLEVDF

KAA0052363.1 hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]8.0e-2539.47Show/hide
Query:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH----------------------------------------
        MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++                                         
Subjt:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH----------------------------------------

Query:  -TISNC--EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LFPYGTFGPLGV
         T++    EF FI  YWEWLE VVGR+  +L++ RL  AV ASLY Y+ N+D+VRAFCEAWCP+TNTLHT AGEL   L+   +FG L +
Subjt:  -TISNC--EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LFPYGTFGPLGV

KAA0061098.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.0e-2438.83Show/hide
Query:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNC-------------------------------------------
        MV F E  +    +LV+L D NQ    GLS +VEKP  G  A  WP   N   +S                                             
Subjt:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNC-------------------------------------------

Query:  --------EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LFPYGTFGPL
                EF F   YWEWLE VVGR+  +L++  L  AV ASLY Y+RNND+VRAFCEAWCP+TNTLHT AGEL   L+   +FG L
Subjt:  --------EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LFPYGTFGPL

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]1.9e-2639.18Show/hide
Query:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNL------------------HTISNC-----------------
        MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++                  H   N                  
Subjt:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNL------------------HTISNC-----------------

Query:  --------EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYGTFGPLGVCPLEVDF
                EF F   YWEWLE VVGR+  +L++ RL  AV ASLY Y+RN+D+VRAFCEAWCP+TNTLHT AGEL          G  P++ DF
Subjt:  --------EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYGTFGPLGVCPLEVDF

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]8.0e-2539.47Show/hide
Query:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH----------------------------------------
        MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++                                         
Subjt:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH----------------------------------------

Query:  -TISNC--EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LFPYGTFGPLGV
         T++    EF FI  YWEWLE VVGR+  +L++ RL  AV ASLY Y+ N+D+VRAFCEAWCP+TNTLHT AGEL   L+   +FG L +
Subjt:  -TISNC--EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LFPYGTFGPLGV

TrEMBL top hitse value%identityAlignment
A0A5A7TX42 Uncharacterized protein1.6e-2638.66Show/hide
Query:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH----------------------------------------
        MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++                                         
Subjt:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH----------------------------------------

Query:  -TISNC--EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYGTFGPLGVCPLEVDF
         T++    EF F   YWEWLE VVGR+  +L++ RL  AV ASLY Y+RN+D+VRAFCEAWCP+TNTLHT AGEL          G  P++ DF
Subjt:  -TISNC--EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYGTFGPLGVCPLEVDF

A0A5A7U8X8 PMD domain-containing protein3.9e-2539.47Show/hide
Query:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH----------------------------------------
        MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++                                         
Subjt:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH----------------------------------------

Query:  -TISNC--EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LFPYGTFGPLGV
         T++    EF FI  YWEWLE VVGR+  +L++ RL  AV ASLY Y+ N+D+VRAFCEAWCP+TNTLHT AGEL   L+   +FG L +
Subjt:  -TISNC--EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LFPYGTFGPLGV

A0A5A7VHW8 PMD domain-containing protein9.2e-2739.18Show/hide
Query:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNL------------------HTISNC-----------------
        MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++                  H   N                  
Subjt:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNL------------------HTISNC-----------------

Query:  --------EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYGTFGPLGVCPLEVDF
                EF F   YWEWLE VVGR+  +L++ RL  AV ASLY Y+RN+D+VRAFCEAWCP+TNTLHT AGEL          G  P++ DF
Subjt:  --------EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYGTFGPLGVCPLEVDF

A0A5D3BXQ4 Putative mitochondrial protein1.9e-2438.83Show/hide
Query:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNC-------------------------------------------
        MV F E  +    +LV+L D NQ    GLS +VEKP  G  A  WP   N   +S                                             
Subjt:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNC-------------------------------------------

Query:  --------EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LFPYGTFGPL
                EF F   YWEWLE VVGR+  +L++  L  AV ASLY Y+RNND+VRAFCEAWCP+TNTLHT AGEL   L+   +FG L
Subjt:  --------EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LFPYGTFGPL

A0A5D3DCE5 PMD domain-containing protein3.9e-2539.47Show/hide
Query:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH----------------------------------------
        MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++                                         
Subjt:  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH----------------------------------------

Query:  -TISNC--EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LFPYGTFGPLGV
         T++    EF FI  YWEWLE VVGR+  +L++ RL  AV ASLY Y+ N+D+VRAFCEAWCP+TNTLHT AGEL   L+   +FG L +
Subjt:  -TISNC--EFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LFPYGTFGPLGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50750.1 Plant mobile domain protein family8.3e-0428.79Show/hide
Query:  RYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYG
        ++  W   +    E     A + +AV+AS+Y   +N D++    E WCP T T        +FP+G
Subjt:  RYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYG

AT1G50790.1 Plant mobile domain protein family9.8e-0531.67Show/hide
Query:  RYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGE
        ++  W   +    E +   A + +A++AS Y   +N D+V    E WCP TNT     GE
Subjt:  RYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGE

AT1G50820.1 Aminotransferase-like, plant mobile domain family protein2.8e-0428.79Show/hide
Query:  RYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYG
        ++  W   +    E +   A + +AV+AS Y   ++ D+V    E WCP T T        +FP+G
Subjt:  RYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYG

AT1G51538.1 Aminotransferase-like, plant mobile domain family protein2.2e-0428.36Show/hide
Query:  PRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYG
        P +  W + +    E +   A + +A+ AS+Y   +N  ++ A  E WCP T +        LFP+G
Subjt:  PRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCGATCCACCGCCCACCGGATGGAGGTTATATCGCTGTCGTCGTCGAGCACGACAGATCCGTCTTCCCCAAGTTTGCTGGCTGCAGTGTATTTGGTCGCACCAC
CGGCGGGCCTCGCCAAGAGAAACCCAGCAAGCGTCGATCGGAGTACAACGTCTTTCAACACGAGTACAAGGACATGCTCCTAACTTTGGGACATGTTCCTTGGACTTGTG
TCGCCACCACGCCTTTCAGCATGAGTACAGGGACATGTTCCTCACTTTGGGACATAATCATGGTGTGCTTTGCAGAACATATTGTCTTCGAAAAGACATACCTTGTTCTT
CTGAAAGACAACAATCAACCCATAAGAAGCGGACTCAGCTTCTTAGTAGAAAAGCCTATGACTGGACGTCTTGCAGCCCCATGGCCCCCACCACTAAATTTGCATACCAT
TTCTAACTGTGAATTTCTTTTCATTCCTCGCTATTGGGAGTGGTTAGAATCTGTCGTTGGTCGGAGTGAAGAGGTGCTTCATAATGCACGTTTATTGGATGCAGTGGTGG
CTTCCCTTTACATTTACAATCGAAACAATGACATAGTTCGAGCTTTTTGTGAAGCCTGGTGTCCTGCAACCAATACGCTTCACACTCGTGCGGGAGAACTTTTATTTCCT
TATGGGACCTTTGGACCTTTGGGGGTTTGCCCATTAGAGGTAGATTTTATGAGGAAGTTATCCCTAGTTTTAAAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCGATCCACCGCCCACCGGATGGAGGTTATATCGCTGTCGTCGTCGAGCACGACAGATCCGTCTTCCCCAAGTTTGCTGGCTGCAGTGTATTTGGTCGCACCAC
CGGCGGGCCTCGCCAAGAGAAACCCAGCAAGCGTCGATCGGAGTACAACGTCTTTCAACACGAGTACAAGGACATGCTCCTAACTTTGGGACATGTTCCTTGGACTTGTG
TCGCCACCACGCCTTTCAGCATGAGTACAGGGACATGTTCCTCACTTTGGGACATAATCATGGTGTGCTTTGCAGAACATATTGTCTTCGAAAAGACATACCTTGTTCTT
CTGAAAGACAACAATCAACCCATAAGAAGCGGACTCAGCTTCTTAGTAGAAAAGCCTATGACTGGACGTCTTGCAGCCCCATGGCCCCCACCACTAAATTTGCATACCAT
TTCTAACTGTGAATTTCTTTTCATTCCTCGCTATTGGGAGTGGTTAGAATCTGTCGTTGGTCGGAGTGAAGAGGTGCTTCATAATGCACGTTTATTGGATGCAGTGGTGG
CTTCCCTTTACATTTACAATCGAAACAATGACATAGTTCGAGCTTTTTGTGAAGCCTGGTGTCCTGCAACCAATACGCTTCACACTCGTGCGGGAGAACTTTTATTTCCT
TATGGGACCTTTGGACCTTTGGGGGTTTGCCCATTAGAGGTAGATTTTATGAGGAAGTTATCCCTAGTTTTAAAGAGTTAA
Protein sequenceShow/hide protein sequence
MKSIHRPPDGGYIAVVVEHDRSVFPKFAGCSVFGRTTGGPRQEKPSKRRSEYNVFQHEYKDMLLTLGHVPWTCVATTPFSMSTGTCSSLWDIIMVCFAEHIVFEKTYLVL
LKDNNQPIRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNCEFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFP
YGTFGPLGVCPLEVDFMRKLSLVLKS