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Lag0027438 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027438
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionlight-regulated protein-like
Genome locationchr8:840934..843073
RNA-Seq ExpressionLag0027438
SyntenyLag0027438
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR009856 - Light regulated Lir1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650797.1 hypothetical protein Csa_017474 [Cucumis sativus]6.5e-4876.76Show/hide
Query:  QAVLSIAVPPLLPST--PSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEAC-WANIFPEVRLQPPADHNQTAV
        QAVLSIAVP LLPS+   S   SHF   PLI+  S SSRRS+IKATA+V YDTSVVDYSSAISVFPAEAC+TIGGEAC W N+FPEVRLQ  + +NQ  V
Subjt:  QAVLSIAVPPLLPST--PSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEAC-WANIFPEVRLQPPADHNQTAV

Query:  ASLEEVDREYLDYADSRTVFPGEACDDLGGEFCEAEFLNGVF
        AS EE+DREYLDYADS+TVFPGEACDDLGGEFCE EFLNGVF
Subjt:  ASLEEVDREYLDYADSRTVFPGEACDDLGGEFCEAEFLNGVF

XP_004145699.2 light-regulated protein, chloroplastic [Cucumis sativus]2.2e-4876.92Show/hide
Query:  MQAVLSIAVPPLLPST--PSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEAC-WANIFPEVRLQPPADHNQTA
        MQAVLSIAVP LLPS+   S   SHF   PLI+  S SSRRS+IKATA+V YDTSVVDYSSAISVFPAEAC+TIGGEAC W N+FPEVRLQ  + +NQ  
Subjt:  MQAVLSIAVPPLLPST--PSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEAC-WANIFPEVRLQPPADHNQTA

Query:  VASLEEVDREYLDYADSRTVFPGEACDDLGGEFCEAEFLNGVF
        VAS EE+DREYLDYADS+TVFPGEACDDLGGEFCE EFLNGVF
Subjt:  VASLEEVDREYLDYADSRTVFPGEACDDLGGEFCEAEFLNGVF

XP_022928578.1 light-regulated protein-like [Cucurbita moschata]2.4e-5077.46Show/hide
Query:  MQAVLSIAVPPLLPS-TPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEACWANIFPEVRLQPPADHNQTAVA
        MQAVLSI VPPLLPS TPS N+SHFPSS        SSRRS IKA   VAYDTSVVDYSS ISVFPAEAC+TIGGEACWANIFPEVRLQ  AD ++ A  
Subjt:  MQAVLSIAVPPLLPS-TPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEACWANIFPEVRLQPPADHNQTAVA

Query:  SLEEVDREYLDY-ADSRTVFPGEACDDLGGEFCEAEFLNGVF
        +LEE+DREYLDY A S+TVFPGEACDDLGGEFC AEFLNGVF
Subjt:  SLEEVDREYLDY-ADSRTVFPGEACDDLGGEFCEAEFLNGVF

XP_023531712.1 light-regulated protein, chloroplastic-like [Cucurbita pepo subsp. pepo]3.7e-5180.42Show/hide
Query:  MQAVLSIAVPPLLPS-TPSKNISHFPSSPLISIGSL-SSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEACWANIFPEVRLQPPADHNQTAV
        MQAVLSI VPPLLPS TPS N+SHFPSSP  SI SL SSRRS IKA   VAYDTSVVDYSS ISVFPAEAC+TIGGEACWANIFPEVRLQ  AD  + A 
Subjt:  MQAVLSIAVPPLLPS-TPSKNISHFPSSPLISIGSL-SSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEACWANIFPEVRLQPPADHNQTAV

Query:  ASLEEVDREYLDY-ADSRTVFPGEACDDLGGEFCEAEFLNGVF
         +LEE+DREYLDY A S+TVFPGEACDDLGGEFC AEFLNGVF
Subjt:  ASLEEVDREYLDY-ADSRTVFPGEACDDLGGEFCEAEFLNGVF

XP_038893926.1 light-regulated protein, chloroplastic-like [Benincasa hispida]1.2e-4978.72Show/hide
Query:  MQAVLSIAVPPLLPSTPSKNISHFPSS-PLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEACWANIFPEVRLQPPADHNQTAVA
        MQAVLSIAVPPLLPST S N    PS  PLIS  S  SRRSAIKATA+V YD S+VDYSSAISVFPAEAC+TIGGEACWAN+FPEVR+QP  ++ + AVA
Subjt:  MQAVLSIAVPPLLPSTPSKNISHFPSS-PLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEACWANIFPEVRLQPPADHNQTAVA

Query:  SLEEVDREYLDYADSRTVFPGEACDDLGGEFCEAEFLNGVF
         LEE+DREYLDYADSRTVFPGEACDDLGGEFCE EFLN VF
Subjt:  SLEEVDREYLDYADSRTVFPGEACDDLGGEFCEAEFLNGVF

TrEMBL top hitse value%identityAlignment
A0A0A0L8G9 Uncharacterized protein1.1e-4876.92Show/hide
Query:  MQAVLSIAVPPLLPST--PSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEAC-WANIFPEVRLQPPADHNQTA
        MQAVLSIAVP LLPS+   S   SHF   PLI+  S SSRRS+IKATA+V YDTSVVDYSSAISVFPAEAC+TIGGEAC W N+FPEVRLQ  + +NQ  
Subjt:  MQAVLSIAVPPLLPST--PSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEAC-WANIFPEVRLQPPADHNQTA

Query:  VASLEEVDREYLDYADSRTVFPGEACDDLGGEFCEAEFLNGVF
        VAS EE+DREYLDYADS+TVFPGEACDDLGGEFCE EFLNGVF
Subjt:  VASLEEVDREYLDYADSRTVFPGEACDDLGGEFCEAEFLNGVF

A0A1S3BND3 light-regulated protein isoform X22.7e-4778.01Show/hide
Query:  AVLSIAVPPLLPSTPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEA-CWANIFPEVRLQPPADHNQT-AVAS
        AVLSIAVP LLPS+   N SH    P I+ GS SSR SAIKATA+V YDTSVVDYSSAISVFPAEAC+TIGGEA CWAN+FPEVRLQP  ++NQ  AVA+
Subjt:  AVLSIAVPPLLPSTPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEA-CWANIFPEVRLQPPADHNQT-AVAS

Query:  LEEVDREYLDY-ADSRTVFPGEACDDLGGEFCEAEFLNGVF
        LEE+DREYLDY ADS+TVF GEACDDLGGEFCEAEFLNGVF
Subjt:  LEEVDREYLDY-ADSRTVFPGEACDDLGGEFCEAEFLNGVF

A0A1S4DXW1 light-regulated protein isoform X32.7e-4778.01Show/hide
Query:  AVLSIAVPPLLPSTPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEA-CWANIFPEVRLQPPADHNQT-AVAS
        AVLSIAVP LLPS+   N SH    P I+ GS SSR SAIKATA+V YDTSVVDYSSAISVFPAEAC+TIGGEA CWAN+FPEVRLQP  ++NQ  AVA+
Subjt:  AVLSIAVPPLLPSTPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEA-CWANIFPEVRLQPPADHNQT-AVAS

Query:  LEEVDREYLDY-ADSRTVFPGEACDDLGGEFCEAEFLNGVF
        LEE+DREYLDY ADS+TVF GEACDDLGGEFCEAEFLNGVF
Subjt:  LEEVDREYLDY-ADSRTVFPGEACDDLGGEFCEAEFLNGVF

A0A5A7VMP8 Light-regulated protein isoform X24.1e-4878.72Show/hide
Query:  AVLSIAVPPLLPSTPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEA-CWANIFPEVRLQPPADHNQT-AVAS
        AVLSIAVP LLPS+   N SH    P I+ GS SSRRSAIKATA+V YDTSVVDYSSAISVFPAEAC+TIGGEA CWAN+FPEVRLQP  ++NQ  AVA+
Subjt:  AVLSIAVPPLLPSTPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEA-CWANIFPEVRLQPPADHNQT-AVAS

Query:  LEEVDREYLDY-ADSRTVFPGEACDDLGGEFCEAEFLNGVF
        LEE+DREYLDY ADS+TVF GEACDDLGGEFCEAEFLNGVF
Subjt:  LEEVDREYLDY-ADSRTVFPGEACDDLGGEFCEAEFLNGVF

A0A6J1EPG4 light-regulated protein-like1.2e-5077.46Show/hide
Query:  MQAVLSIAVPPLLPS-TPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEACWANIFPEVRLQPPADHNQTAVA
        MQAVLSI VPPLLPS TPS N+SHFPSS        SSRRS IKA   VAYDTSVVDYSS ISVFPAEAC+TIGGEACWANIFPEVRLQ  AD ++ A  
Subjt:  MQAVLSIAVPPLLPS-TPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEACWANIFPEVRLQPPADHNQTAVA

Query:  SLEEVDREYLDY-ADSRTVFPGEACDDLGGEFCEAEFLNGVF
        +LEE+DREYLDY A S+TVFPGEACDDLGGEFC AEFLNGVF
Subjt:  SLEEVDREYLDY-ADSRTVFPGEACDDLGGEFCEAEFLNGVF

SwissProt top hitse value%identityAlignment
Q03200 Light-regulated protein, chloroplastic2.4e-2156.57Show/hide
Query:  RRSAIK---ATATVAYDTSVVDYSSAISVFPAEACDTIGGEACWANIFPEVRLQPPADHNQTAVASLEEVDREYLDYADSRTVFPGEACDDLGGEFCEA
        RR A++   A A VA + + VDYSS ISVFP EACD IGGEAC   ++PE +L   A     + A+ EEVDR+YL Y +  TVFP EACDDLGGEFC+A
Subjt:  RRSAIK---ATATVAYDTSVVDYSSAISVFPAEACDTIGGEACWANIFPEVRLQPPADHNQTAVASLEEVDREYLDYADSRTVFPGEACDDLGGEFCEA

Q96500 Light-regulated protein 1, chloroplastic4.7e-1743.26Show/hide
Query:  MQAVLSIAVPPLLP-----STPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAI-SVFPAEACDTIGGEACWANIFPEVRLQPPADHN
        MQ  L I    LLP     S+P        ++    + SL S  S+  +++++  D + VDY+S+I SVFPAEAC+ I G AC A+I+PEV+L       
Subjt:  MQAVLSIAVPPLLP-----STPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAI-SVFPAEACDTIGGEACWANIFPEVRLQPPADHN

Query:  QTAVASLEEVDREYLDYADSRTVFPGEACDDLGGEFCEAEF
          A    E VDREY +Y   +TVF  EACDDLGGEFCE +F
Subjt:  QTAVASLEEVDREYLDYADSRTVFPGEACDDLGGEFCEAEF

Arabidopsis top hitse value%identityAlignment
AT3G26740.1 CCR-like3.4e-1843.26Show/hide
Query:  MQAVLSIAVPPLLP-----STPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAI-SVFPAEACDTIGGEACWANIFPEVRLQPPADHN
        MQ  L I    LLP     S+P        ++    + SL S  S+  +++++  D + VDY+S+I SVFPAEAC+ I G AC A+I+PEV+L       
Subjt:  MQAVLSIAVPPLLP-----STPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAI-SVFPAEACDTIGGEACWANIFPEVRLQPPADHN

Query:  QTAVASLEEVDREYLDYADSRTVFPGEACDDLGGEFCEAEF
          A    E VDREY +Y   +TVF  EACDDLGGEFCE +F
Subjt:  QTAVASLEEVDREYLDYADSRTVFPGEACDDLGGEFCEAEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCTGTTCTTAGCATTGCTGTTCCTCCCCTTCTCCCCTCAACACCTTCCAAGAACATTTCTCACTTTCCCTCTTCTCCCTTGATCTCAATTGGCTCTCTCTCCTC
TCGTCGCTCGGCAATCAAAGCAACCGCGACGGTTGCCTACGACACTTCAGTGGTTGATTACAGCTCCGCTATCTCGGTGTTTCCTGCAGAAGCATGTGATACCATCGGTG
GAGAAGCGTGTTGGGCTAATATTTTTCCAGAAGTAAGGCTTCAGCCTCCTGCTGATCACAATCAAACGGCCGTAGCTTCTTTGGAGGAGGTTGATAGAGAGTATCTCGAT
TACGCGGATTCGAGGACCGTTTTCCCAGGAGAGGCTTGCGATGATCTTGGTGGAGAATTCTGTGAAGCCGAGTTTCTAAATGGCGTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCTGTTCTTAGCATTGCTGTTCCTCCCCTTCTCCCCTCAACACCTTCCAAGAACATTTCTCACTTTCCCTCTTCTCCCTTGATCTCAATTGGCTCTCTCTCCTC
TCGTCGCTCGGCAATCAAAGCAACCGCGACGGTTGCCTACGACACTTCAGTGGTTGATTACAGCTCCGCTATCTCGGTGTTTCCTGCAGAAGCATGTGATACCATCGGTG
GAGAAGCGTGTTGGGCTAATATTTTTCCAGAAGTAAGGCTTCAGCCTCCTGCTGATCACAATCAAACGGCCGTAGCTTCTTTGGAGGAGGTTGATAGAGAGTATCTCGAT
TACGCGGATTCGAGGACCGTTTTCCCAGGAGAGGCTTGCGATGATCTTGGTGGAGAATTCTGTGAAGCCGAGTTTCTAAATGGCGTTTTCTAA
Protein sequenceShow/hide protein sequence
MQAVLSIAVPPLLPSTPSKNISHFPSSPLISIGSLSSRRSAIKATATVAYDTSVVDYSSAISVFPAEACDTIGGEACWANIFPEVRLQPPADHNQTAVASLEEVDREYLD
YADSRTVFPGEACDDLGGEFCEAEFLNGVF