; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027453 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027453
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionC2H2-like zinc finger protein
Genome locationchr8:982507..982980
RNA-Seq ExpressionLag0027453
SyntenyLag0027453
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588875.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]4.3e-6485.8Show/hide
Query:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS
        MADPAIYDFLSQ TASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS PPPPP T YHHLA PS
Subjt:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS

Query:  ATAPAPVPAALLDEHWSFHQNHYRGTTTTA---ATASASPDYLSPNADAAVEHVTIDLTLRL
         TA A  P+AL DEHW    NHYRGTTTTA   A+ASASP+ LSPNADAAVEHVTIDLTLRL
Subjt:  ATAPAPVPAALLDEHWSFHQNHYRGTTTTA---ATASASPDYLSPNADAAVEHVTIDLTLRL

KAG7022634.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-6485.28Show/hide
Query:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS--PPPPPTTAYHHLAPP
        MADPAIYDFLSQ TASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS  PPPPP T YHHLA P
Subjt:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS--PPPPPTTAYHHLAPP

Query:  SATAPAPVPAALLDEHWSFHQNHYRGTTTTA---ATASASPDYLSPNADAAVEHVTIDLTLRL
        S TA A  P+AL DEHW    NHYRGTTTTA   A+ASASP+ LSPNADAAVEHVTIDLTLRL
Subjt:  SATAPAPVPAALLDEHWSFHQNHYRGTTTTA---ATASASPDYLSPNADAAVEHVTIDLTLRL

XP_022928226.1 protein LATE FLOWERING-like [Cucurbita moschata]3.6e-6386.16Show/hide
Query:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS
        MADPAIYDFLSQ TASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS PPPPP T YHHLA PS
Subjt:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS

Query:  ATAPAPVPAALLDEHWSFHQNHYRGTTTTAATASASPDYLSPNADAAVEHVTIDLTLRL
         TA A  P+AL DEHW    NHYRGTTT   TASASP+ LSPNADAAVEHVTIDLTLRL
Subjt:  ATAPAPVPAALLDEHWSFHQNHYRGTTTTAATASASPDYLSPNADAAVEHVTIDLTLRL

XP_022989523.1 protein LATE FLOWERING-like [Cucurbita maxima]7.3e-6486.79Show/hide
Query:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS
        MADPAIYDFLSQ TASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK FTSEILHLGSLQHS PPPPP T YHHLA PS
Subjt:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS

Query:  ATAPAPVPAALLDEHWSFHQNHYRGTTTTAATASASPDYLSPNADAAVEHVTIDLTLRL
        ATA A  P+AL DEHW    NHYRGTTTT A+ASASP+ LSPNADAAVEHVTIDLTLRL
Subjt:  ATAPAPVPAALLDEHWSFHQNHYRGTTTTAATASASPDYLSPNADAAVEHVTIDLTLRL

XP_023530190.1 zinc finger protein 7-like [Cucurbita pepo subsp. pepo]2.5e-6484.05Show/hide
Query:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTTAYHHLAPPSA
        MADPAIYDFLSQ  ASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL HS PPPP T YHHLA PSA
Subjt:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTTAYHHLAPPSA

Query:  TAPAPVPAALLDEHWSFHQNHYRGTTTT-----AATASASPDYLSPNADAAVEHVTIDLTLRL
        TAPAP P  L DEHW    NHYRGTTTT     +A+ASASP+ LSPNADAAVEHVTIDLTLRL
Subjt:  TAPAPVPAALLDEHWSFHQNHYRGTTTT-----AATASASPDYLSPNADAAVEHVTIDLTLRL

TrEMBL top hitse value%identityAlignment
A0A6J1DQT0 zinc finger protein 69.3e-4166.88Show/hide
Query:  MADPAIYDFLSQNTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHL--GSLQHSPPPPPTTAYHHLAPPS
        MADPAIYDFLSQ T     PK SRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK F S++LH     + +SPPPP         PPS
Subjt:  MADPAIYDFLSQNTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHL--GSLQHSPPPPPTTAYHHLAPPS

Query:  ATAPAPVPAALLDEHWSF-HQNHYRGTTTTAATASASPDYLSPNADAAVEHVTIDLTLRL
        A +PA + A+ LDEHW   HQNH+R   ++A+T     D LSPNAD AVE+VTIDLTLRL
Subjt:  ATAPAPVPAALLDEHWSF-HQNHYRGTTTTAATASASPDYLSPNADAAVEHVTIDLTLRL

A0A6J1EJQ6 protein LATE FLOWERING-like1.7e-6386.16Show/hide
Query:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS
        MADPAIYDFLSQ TASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS PPPPP T YHHLA PS
Subjt:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS

Query:  ATAPAPVPAALLDEHWSFHQNHYRGTTTTAATASASPDYLSPNADAAVEHVTIDLTLRL
         TA A  P+AL DEHW    NHYRGTTT   TASASP+ LSPNADAAVEHVTIDLTLRL
Subjt:  ATAPAPVPAALLDEHWSFHQNHYRGTTTTAATASASPDYLSPNADAAVEHVTIDLTLRL

A0A6J1F843 protein LATE FLOWERING-like6.0e-5675.3Show/hide
Query:  MADPAIYDFLSQ-NTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTTAYHHL-----
        MADPAIYDFL+Q  TASNSAPK SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGSL   PPP  TT +HHL     
Subjt:  MADPAIYDFLSQ-NTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTTAYHHL-----

Query:  -APPSATAPAPVPAALLDEHWSFHQNHYRG--TTTTAATASASPDYLSPNADAAVEHVTIDLTLRL
         AP     P P PA  L +HW F+QNHY    TTT +A+ASASPD LSPNAD AVEHVTIDLTLRL
Subjt:  -APPSATAPAPVPAALLDEHWSFHQNHYRG--TTTTAATASASPDYLSPNADAAVEHVTIDLTLRL

A0A6J1J5R2 protein LATE FLOWERING-like5.6e-5475.9Show/hide
Query:  MADPAIYDFLSQ-NTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTT--AYHHLAPP
        MADPAIYDFL+Q  TASNSAPK SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGSL   PP P TT   +HHL  P
Subjt:  MADPAIYDFLSQ-NTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTT--AYHHLAPP

Query:  SATAPA----PVPAALLDEHWSFHQNHYRG--TTTTAATASASPDYLSPNADAAVEHVTIDLTLRL
           APA    P PA  L +HW F+QNHY    TTTT A+ASASPD LSPN D AVEHVTIDLTLRL
Subjt:  SATAPA----PVPAALLDEHWSFHQNHYRG--TTTTAATASASPDYLSPNADAAVEHVTIDLTLRL

A0A6J1JQI7 protein LATE FLOWERING-like3.5e-6486.79Show/hide
Query:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS
        MADPAIYDFLSQ TASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK FTSEILHLGSLQHS PPPPP T YHHLA PS
Subjt:  MADPAIYDFLSQNTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS

Query:  ATAPAPVPAALLDEHWSFHQNHYRGTTTTAATASASPDYLSPNADAAVEHVTIDLTLRL
        ATA A  P+AL DEHW    NHYRGTTTT A+ASASP+ LSPNADAAVEHVTIDLTLRL
Subjt:  ATAPAPVPAALLDEHWSFHQNHYRGTTTTAATASASPDYLSPNADAAVEHVTIDLTLRL

SwissProt top hitse value%identityAlignment
Q39263 Zinc finger protein 46.9e-0950.85Show/hide
Query:  LSQNTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        L  ++ S S+    ++ Q    S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  LSQNTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

Q39266 Zinc finger protein 74.5e-0835.19Show/hide
Query:  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA---------------FTSEIL----HLGSLQH--SPPPPPTTAYHHLAPPSATAPA
        KS    ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A               +TS  L    H G L H  S P P  + +HH      T P 
Subjt:  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA---------------FTSEIL----HLGSLQH--SPPPPPTTAYHHLAPPSATAPA

Query:  --PVPAALLDEHW--SFHQ--NHYRGTTTTAATASASPDYLSPNADAAVEHVTI--DLTLRL
                 D  W  SF Q            A+  +  D  S  A+  V++ +   DLTLRL
Subjt:  --PVPAALLDEHW--SFHQ--NHYRGTTTTAATASASPDYLSPNADAAVEHVTI--DLTLRL

Q42485 Zinc finger protein 19.0e-0953.85Show/hide
Query:  SNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK
        S+S+    +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Subjt:  SNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK

Q9FFX4 Zinc finger protein KNUCKLES5.5e-1451.85Show/hide
Query:  PAIYDFLSQNTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPP
        P+   F+      +S+ + S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG L +SPP
Subjt:  PAIYDFLSQNTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPP

Q9FKA9 Protein LATE FLOWERING7.4e-1164.58Show/hide
Query:  KTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        K + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A
Subjt:  KTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 73.2e-0935.19Show/hide
Query:  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA---------------FTSEIL----HLGSLQH--SPPPPPTTAYHHLAPPSATAPA
        KS    ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A               +TS  L    H G L H  S P P  + +HH      T P 
Subjt:  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA---------------FTSEIL----HLGSLQH--SPPPPPTTAYHHLAPPSATAPA

Query:  --PVPAALLDEHW--SFHQ--NHYRGTTTTAATASASPDYLSPNADAAVEHVTI--DLTLRL
                 D  W  SF Q            A+  +  D  S  A+  V++ +   DLTLRL
Subjt:  --PVPAALLDEHW--SFHQ--NHYRGTTTTAATASASPDYLSPNADAAVEHVTI--DLTLRL

AT1G66140.1 zinc finger protein 44.9e-1050.85Show/hide
Query:  LSQNTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        L  ++ S S+    ++ Q    S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  LSQNTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

AT1G80730.1 zinc-finger protein 16.4e-1053.85Show/hide
Query:  SNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK
        S+S+    +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Subjt:  SNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein3.9e-1551.85Show/hide
Query:  PAIYDFLSQNTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPP
        P+   F+      +S+ + S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG L +SPP
Subjt:  PAIYDFLSQNTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPP

AT5G48890.1 C2H2-like zinc finger protein5.3e-1264.58Show/hide
Query:  KTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        K + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A
Subjt:  KTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATCCTGCCATTTACGACTTCCTCAGCCAAAACACTGCTTCCAATTCCGCGCCGAAAACCTCCAGAAAATCTCAGTCTCAATACTCTTCCTCTCGCATTTTCCC
ATGCCTCTACTGCCCTCGCAAATTCTACACTTCTCAAGCCCTAGGTGGCCACCAAAACGCTCACAAAAGAGAGAGAGCCGCCTCTCGTAAGGCCTTCACCTCTGAAATTC
TTCACCTCGGTTCGCTTCAACACTCGCCGCCGCCTCCGCCGACGACCGCTTACCACCATCTTGCGCCACCGTCTGCCACGGCGCCGGCTCCAGTTCCAGCGGCGCTTCTC
GACGAGCATTGGTCGTTCCATCAGAATCACTACCGAGGTACTACTACCACCGCGGCCACCGCCTCCGCCTCACCGGACTATCTCTCTCCGAATGCCGATGCTGCCGTCGA
ACACGTAACGATCGACCTCACTCTTCGCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATCCTGCCATTTACGACTTCCTCAGCCAAAACACTGCTTCCAATTCCGCGCCGAAAACCTCCAGAAAATCTCAGTCTCAATACTCTTCCTCTCGCATTTTCCC
ATGCCTCTACTGCCCTCGCAAATTCTACACTTCTCAAGCCCTAGGTGGCCACCAAAACGCTCACAAAAGAGAGAGAGCCGCCTCTCGTAAGGCCTTCACCTCTGAAATTC
TTCACCTCGGTTCGCTTCAACACTCGCCGCCGCCTCCGCCGACGACCGCTTACCACCATCTTGCGCCACCGTCTGCCACGGCGCCGGCTCCAGTTCCAGCGGCGCTTCTC
GACGAGCATTGGTCGTTCCATCAGAATCACTACCGAGGTACTACTACCACCGCGGCCACCGCCTCCGCCTCACCGGACTATCTCTCTCCGAATGCCGATGCTGCCGTCGA
ACACGTAACGATCGACCTCACTCTTCGCTTATAA
Protein sequenceShow/hide protein sequence
MADPAIYDFLSQNTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTTAYHHLAPPSATAPAPVPAALL
DEHWSFHQNHYRGTTTTAATASASPDYLSPNADAAVEHVTIDLTLRL