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Lag0027484 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027484
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonucleoside-diphosphate reductase small chain
Genome locationchr8:1316763..1317242
RNA-Seq ExpressionLag0027484
SyntenyLag0027484
Gene Ontology termsGO:0009263 - deoxyribonucleotide biosynthetic process (biological process)
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000358 - Ribonucleotide reductase small subunit family
IPR009078 - Ferritin-like superfamily
IPR012348 - Ribonucleotide reductase-like
IPR033909 - Ribonucleotide reductase small subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581100.1 hypothetical protein SDJN03_21102, partial [Cucurbita argyrosperma subsp. sororia]8.4e-6882.24Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPIQYP+IWEMYKK EASFWT EEVDLSQDLRHWESLTS+EKHF+THVLAFF ASDGIVLENL GRFM E+QV EARAFYG QI IEN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        TYIKDSN+K+RLF AIETVPC+K K  WALKWID+TE+F ERILAF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

XP_004145693.1 ribonucleoside-diphosphate reductase small chain [Cucumis sativus]2.9e-6882.24Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPIQYP+IWEMYKK EASFWT EEVDLSQD RHW+SLTS+EKHF+THVLAFF ASDGIVLENL GRFM E+QV E RAFYG QI IEN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        TYIKDSNEKNRLFHAI+TVPC+K K  WALKWID+TESF ERILAF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

XP_022935447.1 ribonucleoside-diphosphate reductase small chain [Cucurbita moschata]3.8e-6882.89Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPIQYP+IWEMYKK EASFWT EEVDLSQDLRHWESLTS+EKHF+THVLAFF ASDGIVLENL GRFM E+QV EARAFYG QI IEN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        TYIKDSNEK+RLF AIETVPC+K K  WALKWID+TE+F ERILAF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

XP_023527500.1 ribonucleoside-diphosphate reductase small chain [Cucurbita pepo subsp. pepo]3.8e-6882.89Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPIQYP+IWEMYKK EASFWT EEVDLSQDLRHWESLTS+EKHF+THVLAFF ASDGIVLENL GRFM E+QV EARAFYG QI IEN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        TYIKDSNEK+RLF AIETVPC+K K  WALKWID+TE+F ERILAF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

XP_038878212.1 ribonucleoside-diphosphate reductase small chain [Benincasa hispida]1.3e-6882.89Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPI YP+IW+MYKK EASFWT EEVDLSQDLRHWESLT++EKHF+THVLAFF ASDGIVLENL GRFM E+QV EARAFYG QI IEN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        TYIKDSNEKNRLFHAIETVPC+K K  WALKWID+TESF ERILAF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

TrEMBL top hitse value%identityAlignment
A0A0A0L8R8 Ribonucleoside-diphosphate reductase small chain1.4e-6882.24Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPIQYP+IWEMYKK EASFWT EEVDLSQD RHW+SLTS+EKHF+THVLAFF ASDGIVLENL GRFM E+QV E RAFYG QI IEN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        TYIKDSNEKNRLFHAI+TVPC+K K  WALKWID+TESF ERILAF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

A0A1S3BNB8 ribonucleoside-diphosphate reductase small chain4.5e-6780.92Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPIQYP+IWEMYKK  ASFWT EEVDLSQDLRHW+SLTS+EKHF+T+VLAFF ASDGIVLENL GRFM E+QV EARAFYG QI IEN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        TYIKDS+EKNRLFHAI+TVPC+K K  WALKWID+T+SF ERILAF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

A0A2C9U7K6 Uncharacterized protein4.5e-6779.61Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPIQYP+IWEMYKK EASFWT EEVDLSQDLRHWE+LTS+EKHF+THVLAFF ASDGIVLENL GRFM E+QV EARAFYG QI IEN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        TYIKDSNEKNRLFHAI+TVPC+  K  WAL+WID +E+F ER++AF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

A0A6J1F5K5 ribonucleoside-diphosphate reductase small chain1.8e-6882.89Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPIQYP+IWEMYKK EASFWT EEVDLSQDLRHWESLTS+EKHF+THVLAFF ASDGIVLENL GRFM E+QV EARAFYG QI IEN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        TYIKDSNEK+RLF AIETVPC+K K  WALKWID+TE+F ERILAF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

B9RBH6 Ribonucleoside-diphosphate reductase small chain, putative9.0e-6882.24Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPIQYP+IWEMYKK EASFWT EEVDLSQDLRHWESLT +EKHF++HVLAFF ASDGIVLENL GRFM E+QV EARAFYG QI IEN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        TYIKDSNEKNRLFHAIETVPCI  K  WALKWID +ESF ERI+AF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

SwissProt top hitse value%identityAlignment
P07201 Ribonucleoside-diphosphate reductase small chain8.5e-5564.71Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        + PIQY  IW+MYKK EASFWT EEVDLS+D+ HWESL  EEKHF++HVLAFF ASDGIV ENLV RF  E+QV EAR FYG QI +EN HSEMYSLL++
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWI-DNTESFVERILAFTCIEAV
        TYIKD  E++ LF+AIET+PC+K K  WA++WI D++ S+ ER++AF  +E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWI-DNTESFVERILAFTCIEAV

P0DKH3 Ribonucleoside-diphosphate reductase small chain B5.1e-6069.93Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWE-SLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLL
        MFPIQYP+IWEMYKK EASFWT EEVDLSQD R WE SLT++E+HF+ HVLAFF ASDGIVLENL  RFM+++Q+ EARAFYG QI IEN HSEMYSLLL
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWE-SLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLL

Query:  ETYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        +TYIKD+ E++ LF AIET+PC+  K  WA+KWI+ ++SF ERI+AF C+E +
Subjt:  ETYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

P49730 Ribonucleoside-diphosphate reductase small chain3.8e-6373.03Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPIQYP+IWEMYKK  ASFWT EEVDLS D RHWE+LT  E+HF+THVLAFF ASDGIVLENL GRFM E+QV EARAFYG QI IEN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        +YIKDS+EK+RLF A+ET PC++ K  WAL+WID +E+F ER++AF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

P50651 Ribonucleoside-diphosphate reductase small chain A1.3e-5867.76Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPI+Y  IWEMYKK EASFWT EEVDLS D++ WE+LT  EKHF++H+LAFF ASDGIVLENL  RF+ ++QVPEARAFYG QI +EN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        T+IKDS EK+RLF+AIET+PCI  K  W L WI +  SF  R++AF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

Q9LSD0 Ribonucleoside-diphosphate reductase small chain C3.3e-5969.28Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWE-SLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLL
        MFPI YP+IWEMYKK EASFWT EEVDLSQD R WE SL   E+HF+ HVLAFF ASDGIVLENL  RFM+++QV EARAFYG QI IEN HSEMYSLLL
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWE-SLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLL

Query:  ETYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        +TYIKD+ E++ LF AIET+PC+  K  WA+KWID +++F ERI+AF C+E +
Subjt:  ETYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

Arabidopsis top hitse value%identityAlignment
AT3G23580.1 ribonucleotide reductase 2A9.0e-6067.76Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE
        MFPI+Y  IWEMYKK EASFWT EEVDLS D++ WE+LT  EKHF++H+LAFF ASDGIVLENL  RF+ ++QVPEARAFYG QI +EN HSEMYSLLLE
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLE

Query:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        T+IKDS EK+RLF+AIET+PCI  K  W L WI +  SF  R++AF C+E +
Subjt:  TYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV

AT3G27060.1 Ferritin/ribonucleotide reductase-like family protein2.4e-6069.28Show/hide
Query:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWE-SLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLL
        MFPI YP+IWEMYKK EASFWT EEVDLSQD R WE SL   E+HF+ HVLAFF ASDGIVLENL  RFM+++QV EARAFYG QI IEN HSEMYSLLL
Subjt:  MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWE-SLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLL

Query:  ETYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV
        +TYIKD+ E++ LF AIET+PC+  K  WA+KWID +++F ERI+AF C+E +
Subjt:  ETYIKDSNEKNRLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCCAATTCAGTACCCCAAAATCTGGGAAATGTACAAGAAGGTCGAAGCCTCCTTCTGGACCACCGAGGAAGTCGATCTCTCTCAGGATCTCCGCCACTGGGAATC
CCTAACTTCCGAAGAGAAGCACTTCATGACTCACGTTCTCGCCTTCTTCACCGCCTCCGACGGCATCGTTTTGGAGAATCTCGTCGGACGGTTCATGACGGAGATCCAAG
TCCCCGAGGCCAGAGCCTTCTATGGATCCCAAATCTTCATCGAGAATAGCCATTCTGAGATGTACAGTCTTCTCCTCGAAACCTACATCAAAGACTCGAACGAGAAGAAT
CGGTTGTTTCACGCGATCGAGACCGTCCCCTGCATCAAGAATAAGGTCGGTTGGGCGCTGAAGTGGATCGACAACACCGAATCATTCGTCGAGCGAATTCTGGCCTTCAC
CTGTATTGAAGCAGTTGAAAAATTCAATCCATATTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCCCAATTCAGTACCCCAAAATCTGGGAAATGTACAAGAAGGTCGAAGCCTCCTTCTGGACCACCGAGGAAGTCGATCTCTCTCAGGATCTCCGCCACTGGGAATC
CCTAACTTCCGAAGAGAAGCACTTCATGACTCACGTTCTCGCCTTCTTCACCGCCTCCGACGGCATCGTTTTGGAGAATCTCGTCGGACGGTTCATGACGGAGATCCAAG
TCCCCGAGGCCAGAGCCTTCTATGGATCCCAAATCTTCATCGAGAATAGCCATTCTGAGATGTACAGTCTTCTCCTCGAAACCTACATCAAAGACTCGAACGAGAAGAAT
CGGTTGTTTCACGCGATCGAGACCGTCCCCTGCATCAAGAATAAGGTCGGTTGGGCGCTGAAGTGGATCGACAACACCGAATCATTCGTCGAGCGAATTCTGGCCTTCAC
CTGTATTGAAGCAGTTGAAAAATTCAATCCATATTTTTAG
Protein sequenceShow/hide protein sequence
MFPIQYPKIWEMYKKVEASFWTTEEVDLSQDLRHWESLTSEEKHFMTHVLAFFTASDGIVLENLVGRFMTEIQVPEARAFYGSQIFIENSHSEMYSLLLETYIKDSNEKN
RLFHAIETVPCIKNKVGWALKWIDNTESFVERILAFTCIEAVEKFNPYF