; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027485 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027485
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionYrdC-like domain-containing protein
Genome locationchr8:1325416..1329185
RNA-Seq ExpressionLag0027485
SyntenyLag0027485
Gene Ontology termsGO:0003725 - double-stranded RNA binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145661.1 uncharacterized protein LOC101214648 isoform X2 [Cucumis sativus]2.1e-14485.33Show/hide
Query:  LHVTTTGYHSSASSLSPIRFPSPPCAV---RSQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAVGVIPTDTVY
        LH +T    SS+ + +PIRFPSPP A      +T R LQVL+M VKRSPKRLKYSAPRFTKEGSL+YV+AESGED WKL+PIVNLLKEGAVGVIPTDTVY
Subjt:  LHVTTTGYHSSASSLSPIRFPSPPCAV---RSQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAVGVIPTDTVY

Query:  GIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVR
        GIVCDLKNPSAIER++RIKNIEP+KPLSILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILTA+KELPK CIRYGTTTAKYASRKNVGVR
Subjt:  GIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVR

Query:  IPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNEPTVHEEIR
        IPDD+ICQAILE+MD PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAE D+EP + E+IR
Subjt:  IPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNEPTVHEEIR

XP_008450106.1 PREDICTED: uncharacterized protein YciO isoform X1 [Cucumis melo]4.6e-14787.33Show/hide
Query:  LHVTTTGYHSSASSLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAVGVIPTDTVY
        LH +T    SS  S +PIRFPSPP A R    +T R LQVL+M VKRSPKRLKYSAPRFTKEGSL+YV+AESGED WKL+PIVNLLKEGAVGVIPTDTVY
Subjt:  LHVTTTGYHSSASSLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAVGVIPTDTVY

Query:  GIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVR
        GIVCDLKNPSAIER+RRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTA+KELPK CIRYGTTTAKYASRKNVGVR
Subjt:  GIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVR

Query:  IPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNEPTVHEEIR
        IPDD ICQAILE+MD+PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAE D+EP + E+IR
Subjt:  IPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNEPTVHEEIR

XP_022156530.1 uncharacterized protein LOC111023411 isoform X1 [Momordica charantia]1.7e-14182.02Show/hide
Query:  MLLHVTTTGYH--------SSASSLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAE-SGEDSWKLEPIVNLLKEG
        M+    T G H        SS  S +PI FPS PC VR   SQT R L VL+MA+KRSPKRLKYS PRFTKEGSL+YV+A+ SGEDSWKLEP+V+LL+EG
Subjt:  MLLHVTTTGYH--------SSASSLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAE-SGEDSWKLEPIVNLLKEG

Query:  AVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTA
        AVGVIPTDTVYGIVCDLKNPSAIER+RRIKNIEP KPLSILCHSFRD+DKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTA+KELPK CIR+GTTTA
Subjt:  AVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTA

Query:  KYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAED
        KYASRKNVGVRIPDD ICQAILE+MDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAE 
Subjt:  KYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAED

Query:  DNEPTVHEEIRFPSAIL
        D      E+I  PSA+L
Subjt:  DNEPTVHEEIRFPSAIL

XP_022984138.1 uncharacterized protein LOC111482522 [Cucurbita maxima]2.0e-14285.1Show/hide
Query:  MLLHVTTTGYHSSAS-------SLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAV
        M+++V ++GY S+AS       S +PIRFPSPP AVR   S+T R LQVL+MAVKRSPKRLKYSAPRFTK+GSLLYV+AESGED+WKLEPIV+LLKEGAV
Subjt:  MLLHVTTTGYHSSAS-------SLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAV

Query:  GVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKY
        GVIPTDTVY IVCDLKNPSAIER+RRIKNIEPSKPLSILCHSFRDIDKYTTGFP GDGQGHSNIFRMVKHCLPGPYTFILTA+KELPKQ I YGTTTAK+
Subjt:  GVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKY

Query:  ASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDN
        ASRKNVGVRIPDD ICQA+LE+MD+PLISTSVKC KENEWLLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITPPK+LRQGKGARLPWMVAE D+
Subjt:  ASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDN

Query:  EP
        EP
Subjt:  EP

XP_038877956.1 uncharacterized protein YciO [Benincasa hispida]3.5e-14785.35Show/hide
Query:  MLLHVTTTGYHSSASSLS------PIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAVG
        M+++V +  Y S+ASS S      PIRFP  P A+R   S+T R LQVL+  VKRSPKRLKYSAPRFTKEGSLLYV+AESGED WKLEPIVNLLKEGAVG
Subjt:  MLLHVTTTGYHSSASSLS------PIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAVG

Query:  VIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYA
        VIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTA+KELPK CIRYGTTTAKYA
Subjt:  VIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYA

Query:  SRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNE
        SRKNVGVRIPDD ICQAILE+MD+PLISTSVK  KENEWLLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAE D+E
Subjt:  SRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNE

Query:  PTVHEEIRFPSAIL
        PTV E+IR   AIL
Subjt:  PTVHEEIRFPSAIL

TrEMBL top hitse value%identityAlignment
A0A0A0LBV9 YrdC-like domain-containing protein1.0e-14485.33Show/hide
Query:  LHVTTTGYHSSASSLSPIRFPSPPCAV---RSQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAVGVIPTDTVY
        LH +T    SS+ + +PIRFPSPP A      +T R LQVL+M VKRSPKRLKYSAPRFTKEGSL+YV+AESGED WKL+PIVNLLKEGAVGVIPTDTVY
Subjt:  LHVTTTGYHSSASSLSPIRFPSPPCAV---RSQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAVGVIPTDTVY

Query:  GIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVR
        GIVCDLKNPSAIER++RIKNIEP+KPLSILC SFRDIDKYTTGFPRGDGQGHS+IFRMVKHCLPGPYTFILTA+KELPK CIRYGTTTAKYASRKNVGVR
Subjt:  GIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVR

Query:  IPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNEPTVHEEIR
        IPDD+ICQAILE+MD PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAE D+EP + E+IR
Subjt:  IPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNEPTVHEEIR

A0A1S3BMX4 uncharacterized protein YciO isoform X12.2e-14787.33Show/hide
Query:  LHVTTTGYHSSASSLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAVGVIPTDTVY
        LH +T    SS  S +PIRFPSPP A R    +T R LQVL+M VKRSPKRLKYSAPRFTKEGSL+YV+AESGED WKL+PIVNLLKEGAVGVIPTDTVY
Subjt:  LHVTTTGYHSSASSLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAVGVIPTDTVY

Query:  GIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVR
        GIVCDLKNPSAIER+RRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTA+KELPK CIRYGTTTAKYASRKNVGVR
Subjt:  GIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVR

Query:  IPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNEPTVHEEIR
        IPDD ICQAILE+MD+PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAE D+EP + E+IR
Subjt:  IPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNEPTVHEEIR

A0A5D3C4N1 YrdC domain-containing protein5.3e-14176.16Show/hide
Query:  LHVTTTGYHSSASSLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTK---------------------------------------
        LH +T    SS  S +PIRFPSPP A R    +T R LQVL+M VKRSPKRLKYSAPRFTK                                       
Subjt:  LHVTTTGYHSSASSLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTK---------------------------------------

Query:  -----EGSLLYVEAESGEDSWKLEPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIF
             EGSL+YV+AESGED WKL+PIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIER+RRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIF
Subjt:  -----EGSLLYVEAESGEDSWKLEPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIF

Query:  RMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVR
        RMVKHCLPGPYTFILTA+KELPK CIRYGTTTAKYASRKNVGVRIPDD ICQAILE+MD+PLISTSVK PKENEWLLDPVVIADIYGQEGLDFVVDGGVR
Subjt:  RMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVR

Query:  VADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNEPTVHEEIR
        VADPSTVVDMTITPPKILRQGKGARLPWMVAE D+EP + E+IR
Subjt:  VADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNEPTVHEEIR

A0A6J1DQJ1 uncharacterized protein LOC111023411 isoform X18.1e-14282.02Show/hide
Query:  MLLHVTTTGYH--------SSASSLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAE-SGEDSWKLEPIVNLLKEG
        M+    T G H        SS  S +PI FPS PC VR   SQT R L VL+MA+KRSPKRLKYS PRFTKEGSL+YV+A+ SGEDSWKLEP+V+LL+EG
Subjt:  MLLHVTTTGYH--------SSASSLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAE-SGEDSWKLEPIVNLLKEG

Query:  AVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTA
        AVGVIPTDTVYGIVCDLKNPSAIER+RRIKNIEP KPLSILCHSFRD+DKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTA+KELPK CIR+GTTTA
Subjt:  AVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTA

Query:  KYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAED
        KYASRKNVGVRIPDD ICQAILE+MDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAE 
Subjt:  KYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAED

Query:  DNEPTVHEEIRFPSAIL
        D      E+I  PSA+L
Subjt:  DNEPTVHEEIRFPSAIL

A0A6J1J9P6 uncharacterized protein LOC1114825229.6e-14385.1Show/hide
Query:  MLLHVTTTGYHSSAS-------SLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAV
        M+++V ++GY S+AS       S +PIRFPSPP AVR   S+T R LQVL+MAVKRSPKRLKYSAPRFTK+GSLLYV+AESGED+WKLEPIV+LLKEGAV
Subjt:  MLLHVTTTGYHSSAS-------SLSPIRFPSPPCAVR---SQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAV

Query:  GVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKY
        GVIPTDTVY IVCDLKNPSAIER+RRIKNIEPSKPLSILCHSFRDIDKYTTGFP GDGQGHSNIFRMVKHCLPGPYTFILTA+KELPKQ I YGTTTAK+
Subjt:  GVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKY

Query:  ASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDN
        ASRKNVGVRIPDD ICQA+LE+MD+PLISTSVKC KENEWLLDPVVIADIYG+EGLDFVVDGGVRVADPSTVVDMTITPPK+LRQGKGARLPWMVAE D+
Subjt:  ASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDN

Query:  EP
        EP
Subjt:  EP

SwissProt top hitse value%identityAlignment
P0AFR4 Uncharacterized protein YciO2.1e-2530.54Show/hide
Query:  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCI
        V ++++G V V PTD+ Y + C +++ +A+ERI RI+ +      +++C    ++  Y+           +  FR++K+  PG YTFIL   KE+P++ +
Subjt:  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCI

Query:  RYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARL
        +          RK +G+R+P + I QA+LE +  P++STS+  P       DP  I D   ++ +D ++ GG     P+TV+D+T   P ++R+G G   
Subjt:  RYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARL

Query:  PWM
        P++
Subjt:  PWM

P0AFR5 Uncharacterized protein YciO2.1e-2530.54Show/hide
Query:  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCI
        V ++++G V V PTD+ Y + C +++ +A+ERI RI+ +      +++C    ++  Y+           +  FR++K+  PG YTFIL   KE+P++ +
Subjt:  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCI

Query:  RYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARL
        +          RK +G+R+P + I QA+LE +  P++STS+  P       DP  I D   ++ +D ++ GG     P+TV+D+T   P ++R+G G   
Subjt:  RYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARL

Query:  PWM
        P++
Subjt:  PWM

P0AFR6 Uncharacterized protein YciO2.1e-2530.54Show/hide
Query:  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCI
        V ++++G V V PTD+ Y + C +++ +A+ERI RI+ +      +++C    ++  Y+           +  FR++K+  PG YTFIL   KE+P++ +
Subjt:  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCI

Query:  RYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARL
        +          RK +G+R+P + I QA+LE +  P++STS+  P       DP  I D   ++ +D ++ GG     P+TV+D+T   P ++R+G G   
Subjt:  RYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARL

Query:  PWM
        P++
Subjt:  PWM

P45103 Uncharacterized protein HI_11983.5e-2531.37Show/hide
Query:  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCI
        V +L++G V V PTD+ Y + C + +  A++RI  I+ +      +++C    ++  Y         + ++  +R++K+  PG YTFILTA KELP++ +
Subjt:  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCI

Query:  RYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCP-KENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGAR
                 + RK +G+R+PD+ I   +L  +  P++S S+  P +E+    DP  I D   +  +D ++ GG    +P+TVVD+T   P ILR+G G+ 
Subjt:  RYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCP-KENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGAR

Query:  LPWM
         P++
Subjt:  LPWM

Q9UYB2 Threonylcarbamoyl-AMP synthase9.6e-1527.45Show/hide
Query:  DSWKLEPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTAN
        + WK+      ++EG +   PT+TVYG+  +  + +A++RI   K      PL I   SF  ++      P            + K   PGP T +L  +
Subjt:  DSWKLEPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTAN

Query:  KELPKQCIRYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGG-VRVADPSTVVDMTITPPKI
        + +P+  I  G  T        V VR+P   I   ++E  + P+ + S     +        V  D YG+  ++ ++DGG  R+   STV+D+T  PP +
Subjt:  KELPKQCIRYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGG-VRVADPSTVVDMTITPPKI

Query:  LRQG
        LR G
Subjt:  LRQG

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain5.1e-11268.98Show/hide
Query:  SPIRFPSPPCAVRSQTLRPLQ-VLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAE-SGEDSWKLEPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIR
        SP+    P     + +L P + ++++A KRSPKRLKYS PRFTKEG L+Y+E +  G DSWKL+P+++LLK+GAVGVIPTDTVY I CD KN SA+ER+R
Subjt:  SPIRFPSPPCAVRSQTLRPLQ-VLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAE-SGEDSWKLEPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIR

Query:  RIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVRIPDDTICQAILERMDS
        RIK IE SKPLSILC S RDID +T GFPRGDG GH+N+FR VK CLPGPYTFILTA+KELPKQC+ YGTT+ KYASRKNVGVRI DD +CQAIL++MD+
Subjt:  RIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVRIPDDTICQAILERMDS

Query:  PLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDD
        PLI TSVK PKENEW++DP  I DIYG EGLDFVVDGG+RVA+PST+VDMT   PK++R+GKG  LPWMV EDD
Subjt:  PLISTSVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDD

AT5G60590.1 DHBP synthase RibB-like alpha/beta domain2.9e-0631.87Show/hide
Query:  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKY--TTGFPRGDGQGHSNIFRMVKHCLPGPYTFIL
        +  +K   V  +PTDT+YG  CD  +  A+ RI  IK  + + PL+I      DI +   T+  P G          ++   LPGP T +L
Subjt:  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKY--TTGFPRGDGQGHSNIFRMVKHCLPGPYTFIL

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain6.6e-1126.2Show/hide
Query:  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKY--TTGFPRGDGQGHSNIFRMVKHCLPGPYTFIL-TANKELPK
        +  +K   V  +PTDT+YG  CD  +  A+ RI  IK  + + PL+I      DI +   T+  P G          ++   LPGP T +L      + +
Subjt:  VNLLKEGAVGVIPTDTVYGIVCDLKNPSAIERIRRIKNIEPSKPLSILCHSFRDIDKY--TTGFPRGDGQGHSNIFRMVKHCLPGPYTFIL-TANKELPK

Query:  QCIRYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYG-QEGLDFVVDGGVRVAD--PSTVVDMT-ITPPKILR
        + +  G  T        +GVR+PD    + +     S L  TS     +       V + D     +   +V DGG+  +    ST+VD+T +   KI+R
Subjt:  QCIRYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLISTSVKCPKENEWLLDPVVIADIYG-QEGLDFVVDGGVRVAD--PSTVVDMT-ITPPKILR

Query:  QGKGARLPWMVAE----DDNEPTVHEEIR
         G   +    + E    ++ E   H+E R
Subjt:  QGKGARLPWMVAE----DDNEPTVHEEIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCTCCATGTCACAACCACCGGATATCACTCTTCTGCTTCTTCTCTCTCGCCTATTCGCTTCCCTTCGCCTCCATGTGCTGTTCGTTCTCAAACTTTACGGCCGCT
CCAGGTCCTCTCCATGGCTGTCAAGCGGAGTCCCAAGCGCCTCAAGTACTCTGCTCCACGCTTCACCAAGGAAGGGAGCTTGCTATATGTCGAAGCTGAATCAGGAGAGG
ACAGCTGGAAATTAGAACCTATTGTAAATCTTCTTAAAGAGGGTGCAGTTGGGGTTATTCCTACGGATACAGTGTATGGAATAGTTTGTGATTTGAAGAACCCCTCAGCC
ATTGAACGAATTCGAAGGATCAAGAATATAGAGCCTTCAAAGCCTCTAAGCATTTTGTGCCACTCCTTCCGGGACATCGATAAATATACTACAGGGTTTCCTCGTGGGGA
TGGCCAAGGCCATTCAAATATATTTCGAATGGTTAAGCATTGCTTACCTGGACCATATACCTTCATCTTAACTGCAAACAAAGAACTGCCTAAACAATGTATAAGGTATG
GCACGACCACTGCAAAATATGCATCAAGGAAGAATGTTGGTGTGCGCATTCCGGATGATACGATATGTCAAGCAATACTGGAAAGGATGGATTCCCCATTGATATCCACA
AGTGTCAAATGCCCAAAGGAAAATGAGTGGTTGCTTGATCCAGTTGTCATAGCTGATATCTATGGACAAGAGGGTCTGGATTTTGTGGTGGATGGTGGAGTCAGAGTGGC
AGATCCATCCACTGTAGTAGATATGACTATCACTCCTCCAAAGATTTTGCGGCAAGGGAAGGGAGCTAGACTGCCATGGATGGTAGCTGAAGATGACAATGAACCCACCG
TACACGAAGAAATCCGCTTCCCGTCTGCCATTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCCTCCATGTCACAACCACCGGATATCACTCTTCTGCTTCTTCTCTCTCGCCTATTCGCTTCCCTTCGCCTCCATGTGCTGTTCGTTCTCAAACTTTACGGCCGCT
CCAGGTCCTCTCCATGGCTGTCAAGCGGAGTCCCAAGCGCCTCAAGTACTCTGCTCCACGCTTCACCAAGGAAGGGAGCTTGCTATATGTCGAAGCTGAATCAGGAGAGG
ACAGCTGGAAATTAGAACCTATTGTAAATCTTCTTAAAGAGGGTGCAGTTGGGGTTATTCCTACGGATACAGTGTATGGAATAGTTTGTGATTTGAAGAACCCCTCAGCC
ATTGAACGAATTCGAAGGATCAAGAATATAGAGCCTTCAAAGCCTCTAAGCATTTTGTGCCACTCCTTCCGGGACATCGATAAATATACTACAGGGTTTCCTCGTGGGGA
TGGCCAAGGCCATTCAAATATATTTCGAATGGTTAAGCATTGCTTACCTGGACCATATACCTTCATCTTAACTGCAAACAAAGAACTGCCTAAACAATGTATAAGGTATG
GCACGACCACTGCAAAATATGCATCAAGGAAGAATGTTGGTGTGCGCATTCCGGATGATACGATATGTCAAGCAATACTGGAAAGGATGGATTCCCCATTGATATCCACA
AGTGTCAAATGCCCAAAGGAAAATGAGTGGTTGCTTGATCCAGTTGTCATAGCTGATATCTATGGACAAGAGGGTCTGGATTTTGTGGTGGATGGTGGAGTCAGAGTGGC
AGATCCATCCACTGTAGTAGATATGACTATCACTCCTCCAAAGATTTTGCGGCAAGGGAAGGGAGCTAGACTGCCATGGATGGTAGCTGAAGATGACAATGAACCCACCG
TACACGAAGAAATCCGCTTCCCGTCTGCCATTTTGTAG
Protein sequenceShow/hide protein sequence
MLLHVTTTGYHSSASSLSPIRFPSPPCAVRSQTLRPLQVLSMAVKRSPKRLKYSAPRFTKEGSLLYVEAESGEDSWKLEPIVNLLKEGAVGVIPTDTVYGIVCDLKNPSA
IERIRRIKNIEPSKPLSILCHSFRDIDKYTTGFPRGDGQGHSNIFRMVKHCLPGPYTFILTANKELPKQCIRYGTTTAKYASRKNVGVRIPDDTICQAILERMDSPLIST
SVKCPKENEWLLDPVVIADIYGQEGLDFVVDGGVRVADPSTVVDMTITPPKILRQGKGARLPWMVAEDDNEPTVHEEIRFPSAIL