; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027489 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027489
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr8:1366436..1369935
RNA-Seq ExpressionLag0027489
SyntenyLag0027489
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]3.7e-3449.72Show/hide
Query:  RSDCGERSGISRVAEKREGNGSHGR------YVFCPSSKGTPPLEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERE
        R      SG  R A  RE   S G+      YV   S K    +EF++ EA  +  PHN+ALV+TL + N K+HRIL+DGGSS D+ SLTA+KAM L  E
Subjt:  RSDCGERSGISRVAEKREGNGSHGR------YVFCPSSKGTPPLEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERE

Query:  LLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPTP
        +LK SLTPL+ FGGE +  KG IEL +TF     ++TRM++ LVVD   +YN IL RPT+H ++ I STY Q +KFPTP
Subjt:  LLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPTP

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]7.8e-3255.88Show/hide
Query:  LEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLL
        +EF+K     +  PHN+AL++TL + N K+HRIL+DGGSSAD +SLTA+KAM L +E LK SLTPL+ FGGE V   G IEL VTF  G  ++T+M++ L
Subjt:  LEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLL

Query:  VVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPTP
        VVD   +YNAIL R T++ +K I STY Q +KFPTP
Subjt:  VVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPTP

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]3.2e-3358.52Show/hide
Query:  LEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLL
        +EF++ EA  +  PHN+ALV+TL + NVK+HRIL+DGGSSAD++S TA+KAM L  ++LK S  PLV FGGE V L+G IEL VTFG G  +VT+M++ L
Subjt:  LEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLL

Query:  VVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPT
        VV+   +YNAIL RPT+H +K I STY Q  KFPT
Subjt:  VVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPT

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]3.5e-3248.81Show/hide
Query:  ERSGISRVAEKREGNGSHGRYVFCPSSKGTPPLEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVR
        +++ +      RE N  +  Y+    +     +EF++ EA  +   HN+ALV+TL + NVK+HRIL+DGGSSAD++S TA+KAM LE ++LK S  PLV 
Subjt:  ERSGISRVAEKREGNGSHGRYVFCPSSKGTPPLEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVR

Query:  FGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPTP
        FGGE V  +G IEL VTFG G   VT+M++ LVV+   +YN IL R T+H +KVI STY Q +KFPTP
Subjt:  FGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPTP

XP_022158943.1 uncharacterized protein LOC111025398 [Momordica charantia]1.3e-3150.9Show/hide
Query:  SGISRVAEKREGNGSHGRYVFCPSSKGTPP--LEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVR
        SG  R    RE   S  ++    + K  PP  LEF+K EA  +  PHN  LV +L + N K+HRIL DGGSS D++SLTA+KAM L  +LLK   TPL+ 
Subjt:  SGISRVAEKREGNGSHGRYVFCPSSKGTPP--LEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVR

Query:  FGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIAST-YQLLKFPT
        FGGE V  +G IELLVTFG G  ++ +MI  LV+D   + NAIL +PT+H +KVI ST +Q LKFPT
Subjt:  FGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIAST-YQLLKFPT

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159011.8e-3449.72Show/hide
Query:  RSDCGERSGISRVAEKREGNGSHGR------YVFCPSSKGTPPLEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERE
        R      SG  R A  RE   S G+      YV   S K    +EF++ EA  +  PHN+ALV+TL + N K+HRIL+DGGSS D+ SLTA+KAM L  E
Subjt:  RSDCGERSGISRVAEKREGNGSHGR------YVFCPSSKGTPPLEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERE

Query:  LLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPTP
        +LK SLTPL+ FGGE +  KG IEL +TF     ++TRM++ LVVD   +YN IL RPT+H ++ I STY Q +KFPTP
Subjt:  LLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPTP

A0A6J1DKR9 uncharacterized protein LOC1110214383.8e-3255.88Show/hide
Query:  LEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLL
        +EF+K     +  PHN+AL++TL + N K+HRIL+DGGSSAD +SLTA+KAM L +E LK SLTPL+ FGGE V   G IEL VTF  G  ++T+M++ L
Subjt:  LEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLL

Query:  VVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPTP
        VVD   +YNAIL R T++ +K I STY Q +KFPTP
Subjt:  VVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPTP

A0A6J1DQY2 uncharacterized protein LOC1110223211.5e-3358.52Show/hide
Query:  LEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLL
        +EF++ EA  +  PHN+ALV+TL + NVK+HRIL+DGGSSAD++S TA+KAM L  ++LK S  PLV FGGE V L+G IEL VTFG G  +VT+M++ L
Subjt:  LEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLL

Query:  VVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPT
        VV+   +YNAIL RPT+H +K I STY Q  KFPT
Subjt:  VVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPT

A0A6J1DRG9 uncharacterized protein LOC1110235871.7e-3248.81Show/hide
Query:  ERSGISRVAEKREGNGSHGRYVFCPSSKGTPPLEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVR
        +++ +      RE N  +  Y+    +     +EF++ EA  +   HN+ALV+TL + NVK+HRIL+DGGSSAD++S TA+KAM LE ++LK S  PLV 
Subjt:  ERSGISRVAEKREGNGSHGRYVFCPSSKGTPPLEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVR

Query:  FGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPTP
        FGGE V  +G IEL VTFG G   VT+M++ LVV+   +YN IL R T+H +KVI STY Q +KFPTP
Subjt:  FGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIASTY-QLLKFPTP

A0A6J1DXH0 uncharacterized protein LOC1110253986.4e-3250.9Show/hide
Query:  SGISRVAEKREGNGSHGRYVFCPSSKGTPP--LEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVR
        SG  R    RE   S  ++    + K  PP  LEF+K EA  +  PHN  LV +L + N K+HRIL DGGSS D++SLTA+KAM L  +LLK   TPL+ 
Subjt:  SGISRVAEKREGNGSHGRYVFCPSSKGTPP--LEFTKAEAASIHEPHNNALVVTLMVTNVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVR

Query:  FGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIAST-YQLLKFPT
        FGGE V  +G IELLVTFG G  ++ +MI  LV+D   + NAIL +PT+H +KVI ST +Q LKFPT
Subjt:  FGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIAST-YQLLKFPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAATCGTCGGCATCGAGGTCGCGAAAGGCGAGGGACGCAGCTCTGCAAACGGAAGGCCTAAATCTCTTGCTGAGCGGCGATCGGAAGGAAGTGAGGTTGAATC
TGTGGGAGGCTCCAGATCCGATTGCGGCGAGAGGAGTGGGATTTCGAGGGTGGCAGAGAAAAGAGAAGGGAATGGAAGCCATGGAAGGTATGTATTCTGTCCATCTAGCA
AAGGCACACCCCCTTTGGAGTTCACTAAGGCTGAGGCAGCGAGCATTCATGAGCCACATAATAATGCCCTGGTGGTCACTCTAATGGTAACCAATGTGAAAATCCATCGG
ATCTTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAACAGCCTTTAAAGCAATGCAGTTAGAGAGAGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAAGATT
TGGAGGAGAGGGAGTGACCCTAAAAGGTAGCATAGAACTTCTTGTGACCTTTGGAGATGGGCAGAATGCAGTGACAAGGATGATAAACTTACTAGTTGTGGATTGTATGT
TAGCCTACAATGCAATCCTAAGAAGGCCAACCTTGCATGAAATGAAGGTCATAGCTTCAACTTATCAGTTGCTAAAGTTTCCAACTCCGAATGTTTCACCATTAAAGTTC
AGTATTCAGAAGTGTGCACAAGGCAACCGACTCAAGCATCACGATACGCGAGCCTGGACTCCCGAGTCTACCTTGCCTCATCCAGACTTGAGACTACACTTGAGATTACG
TGAGTCTAGACCACCGAGTCTACCTCACCTCGTCTGCCTTGAGCATCTTCACATCATGCGAGCTTGGACTCCCGAGTCTACCTCACCTCATCCAGACTTGAGACTACACA
TGAGATTATGTGAGCCTGGACCACGGGTCTACCTCACCTCATCTGGTTTGAGCCTGTCACGTGAGTATGGGTTACCAAGTCTACCTCGCCTCATCCGAATATGGGGATTG
CACAAGCCTGGACTACCCACTCCGAATGACCAAGTACGGGGCGAAGCACCCGGTGGGGGTTCAGGGGCAACGCCCCCTAAGCTAAATTACAAGAATGGAGCTGACGAGGA
CAACCGGGCAGAAATAGGACTGGAGGATGGACCCCAGAGACGAAATGAGCTAATGGGTCGGGCCAAGGCTAGAGGGACCGGGCTTTTGGCCCGACCCCCTACTCGGCCTA
GGTCGAGGCCGACCCTCGGCCCACTTGCGCGGGCCAAGCTCATCCGGCTTCGTTTGGTCCCTGCTGCCTTTTACCGCACTGACTCCACCTTGTTCGTCCCGAAACGCCTC
CGAATTCCTAAAAACCTTAGGAGCATGAGCAGAGGCGATGTGGCTAGCACCACACTGGTGTACAGGTTTACTGTCTTGCAGGCCACATCTTCCCTCCTCAAACAAATTTA
CCGTTGGTGGCACGTGAATGTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAATCGTCGGCATCGAGGTCGCGAAAGGCGAGGGACGCAGCTCTGCAAACGGAAGGCCTAAATCTCTTGCTGAGCGGCGATCGGAAGGAAGTGAGGTTGAATC
TGTGGGAGGCTCCAGATCCGATTGCGGCGAGAGGAGTGGGATTTCGAGGGTGGCAGAGAAAAGAGAAGGGAATGGAAGCCATGGAAGGTATGTATTCTGTCCATCTAGCA
AAGGCACACCCCCTTTGGAGTTCACTAAGGCTGAGGCAGCGAGCATTCATGAGCCACATAATAATGCCCTGGTGGTCACTCTAATGGTAACCAATGTGAAAATCCATCGG
ATCTTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTCTAACAGCCTTTAAAGCAATGCAGTTAGAGAGAGAACTCTTAAAGCCAAGCCTTACCCCACTTGTAAGATT
TGGAGGAGAGGGAGTGACCCTAAAAGGTAGCATAGAACTTCTTGTGACCTTTGGAGATGGGCAGAATGCAGTGACAAGGATGATAAACTTACTAGTTGTGGATTGTATGT
TAGCCTACAATGCAATCCTAAGAAGGCCAACCTTGCATGAAATGAAGGTCATAGCTTCAACTTATCAGTTGCTAAAGTTTCCAACTCCGAATGTTTCACCATTAAAGTTC
AGTATTCAGAAGTGTGCACAAGGCAACCGACTCAAGCATCACGATACGCGAGCCTGGACTCCCGAGTCTACCTTGCCTCATCCAGACTTGAGACTACACTTGAGATTACG
TGAGTCTAGACCACCGAGTCTACCTCACCTCGTCTGCCTTGAGCATCTTCACATCATGCGAGCTTGGACTCCCGAGTCTACCTCACCTCATCCAGACTTGAGACTACACA
TGAGATTATGTGAGCCTGGACCACGGGTCTACCTCACCTCATCTGGTTTGAGCCTGTCACGTGAGTATGGGTTACCAAGTCTACCTCGCCTCATCCGAATATGGGGATTG
CACAAGCCTGGACTACCCACTCCGAATGACCAAGTACGGGGCGAAGCACCCGGTGGGGGTTCAGGGGCAACGCCCCCTAAGCTAAATTACAAGAATGGAGCTGACGAGGA
CAACCGGGCAGAAATAGGACTGGAGGATGGACCCCAGAGACGAAATGAGCTAATGGGTCGGGCCAAGGCTAGAGGGACCGGGCTTTTGGCCCGACCCCCTACTCGGCCTA
GGTCGAGGCCGACCCTCGGCCCACTTGCGCGGGCCAAGCTCATCCGGCTTCGTTTGGTCCCTGCTGCCTTTTACCGCACTGACTCCACCTTGTTCGTCCCGAAACGCCTC
CGAATTCCTAAAAACCTTAGGAGCATGAGCAGAGGCGATGTGGCTAGCACCACACTGGTGTACAGGTTTACTGTCTTGCAGGCCACATCTTCCCTCCTCAAACAAATTTA
CCGTTGGTGGCACGTGAATGTCAAGTGA
Protein sequenceShow/hide protein sequence
MAEIVGIEVAKGEGRSSANGRPKSLAERRSEGSEVESVGGSRSDCGERSGISRVAEKREGNGSHGRYVFCPSSKGTPPLEFTKAEAASIHEPHNNALVVTLMVTNVKIHR
ILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVRFGGEGVTLKGSIELLVTFGDGQNAVTRMINLLVVDCMLAYNAILRRPTLHEMKVIASTYQLLKFPTPNVSPLKF
SIQKCAQGNRLKHHDTRAWTPESTLPHPDLRLHLRLRESRPPSLPHLVCLEHLHIMRAWTPESTSPHPDLRLHMRLCEPGPRVYLTSSGLSLSREYGLPSLPRLIRIWGL
HKPGLPTPNDQVRGEAPGGGSGATPPKLNYKNGADEDNRAEIGLEDGPQRRNELMGRAKARGTGLLARPPTRPRSRPTLGPLARAKLIRLRLVPAAFYRTDSTLFVPKRL
RIPKNLRSMSRGDVASTTLVYRFTVLQATSSLLKQIYRWWHVNVK