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Lag0027496 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027496
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDEAD-box ATP-dependent RNA helicase 24
Genome locationchr8:1420535..1421616
RNA-Seq ExpressionLag0027496
SyntenyLag0027496
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5086951.1 hypothetical protein JHK82_054348 [Glycine max]2.3e-0468.18Show/hide
Query:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
        EE      MSE++VSEYRKSLAIRVSG DVP+ IKT ED  FPS
Subjt:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
KHN43447.1 DEAD-box ATP-dependent RNA helicase 24 [Glycine soja]2.3e-0468.18Show/hide
Query:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
        EE      MSE++VSEYRKSLAIRVSG DVP+ IKT ED  FPS
Subjt:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
KOM39392.1 hypothetical protein LR48_Vigan03g277400 [Vigna angularis]2.3e-0471.79Show/hide
Query:  DLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
        D  MSE++VSEYRKSLAIRVSG DVP+ IK  ED  FPS
Subjt:  DLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
RZB49113.1 DEAD-box ATP-dependent RNA helicase 24 isoform B [Glycine soja]2.3e-0468.18Show/hide
Query:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
        EE      MSE++VSEYRKSLAIRVSG DVP+ IKT ED  FPS
Subjt:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
XP_007163191.1 hypothetical protein PHAVU_001G214100g [Phaseolus vulgaris]1.0e-0468.18Show/hide
Query:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
        EE      MSE++VSEYRKSLAIRVSG DVP+ IKT ED  FPS
Subjt:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
TrEMBL top hitse value%identityAlignment
A0A445FJZ1 DEAD-box ATP-dependent RNA helicase 24 isoform B1.1e-0468.18Show/hide
Query:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
        EE      MSE++VSEYRKSLAIRVSG DVP+ IKT ED  FPS
Subjt:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
A0A5A7TS76 DEAD-box ATP-dependent RNA helicase 241.1e-0476.92Show/hide
Query:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSED
        EE+     MSEEEVSEYRKSLAIRVSG DVPR IKT ED
Subjt:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSED
A0A5D3E1C0 DEAD-box ATP-dependent RNA helicase 241.1e-0476.92Show/hide
Query:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSED
        EE+     MSEEEVSEYRKSLAIRVSG DVPR IKT ED
Subjt:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSED
I1NBD6 Uncharacterized protein1.1e-0468.18Show/hide
Query:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
        EE      MSE++VSEYRKSLAIRVSG DVP+ IKT ED  FPS
Subjt:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
V7D110 Uncharacterized protein4.9e-0568.18Show/hide
Query:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
        EE      MSE++VSEYRKSLAIRVSG DVP+ IKT ED  FPS
Subjt:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
SwissProt top hitse value%identityAlignment
Q10MH8 DEAD-box ATP-dependent RNA helicase 243.6e-0560.47Show/hide
Query:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFP
        EE+     MSE+EV++Y KSLAIRVSG DVPR IK+  D  FP
Subjt:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFP
Arabidopsis top hitse value%identityAlignment
AT2G47330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein5.4e-0450Show/hide
Query:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS
        EE +    M+E+E ++YR+ L IRVSG DV R +KT ED  F S
Subjt:  EEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGTTTGGTGTTTAGGTTTAGATCAATGTCTAAGGGTAAAGGTTTGGAGGGTAAAGAAGAAGAAAAAGAGGATTTGTGGATGAGTGAGGAGGAAGTTTCTGAGTA
CCGAAAGAGTTTGGCTATTCGTGTGTCGGGTATTGATGTTCCTAGGTCCATTAAAACATCCGAAGACTGGATTTTCCCCTCAACTTATGAATGCTATAGAATAGCAAGGT
TGAATGAATTCTTAATCTTAGGGCCAACACTTGAATCTGGCTTGGTCATTTGGTCATCTAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCGGTTTGGTGTTTAGGTTTAGATCAATGTCTAAGGGTAAAGGTTTGGAGGGTAAAGAAGAAGAAAAAGAGGATTTGTGGATGAGTGAGGAGGAAGTTTCTGAGTA
CCGAAAGAGTTTGGCTATTCGTGTGTCGGGTATTGATGTTCCTAGGTCCATTAAAACATCCGAAGACTGGATTTTCCCCTCAACTTATGAATGCTATAGAATAGCAAGGT
TGAATGAATTCTTAATCTTAGGGCCAACACTTGAATCTGGCTTGGTCATTTGGTCATCTAGATAG
Protein sequenceShow/hide protein sequence
MIGLVFRFRSMSKGKGLEGKEEEKEDLWMSEEEVSEYRKSLAIRVSGIDVPRSIKTSEDWIFPSTYECYRIARLNEFLILGPTLESGLVIWSSR