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Lag0027497 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027497
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr8:1442029..1442361
RNA-Seq ExpressionLag0027497
SyntenyLag0027497
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7802400.1 uncharacterized protein G2W53_041511 [Senna tora]6.1e-0936.46Show/hide
Query:  LKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDI
        LKLN+D SVR D G+   GC++R   G    +    +  C+SV++AE   VY+G+ +A+++     +VE DS  ++K+L+GE  D + V  ++ DI
Subjt:  LKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDI

XP_010688587.1 PREDICTED: uncharacterized protein LOC104902499 [Beta vulgaris subsp. vulgaris]2.1e-0939Show/hide
Query:  PVSKLKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDI
        P   LKLN DV++  D G+ G G +LR   G+V  + C   Q    VD  E   V +G+++A + GF +F VETDSLR+ + L    +++S +G++M DI
Subjt:  PVSKLKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDI

XP_021841246.1 uncharacterized protein LOC110781352 [Spinacia oleracea]1.6e-0936.36Show/hide
Query:  LKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDIRGI
        LK+N+D ++  D G AG G ++R   G V  +ACL +   W V + E  ++  G++LA Q G  + VVE+D L+++K+++GE++D   +G++  +IR I
Subjt:  LKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDIRGI

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]5.0e-1141.24Show/hide
Query:  LKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDIR
        LK+N+D + R ++  AG G ++R + G V+++A   L R   VD  EG+ VY+G+ LA + GF  F +ETDSLR+  +L  +  D SEVG+L   I+
Subjt:  LKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDIR

XP_042988669.1 uncharacterized protein LOC122316201 [Carya illinoinensis]2.3e-0834.62Show/hide
Query:  PVSKLKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDI
        P+  LKLN+D +   D+  AG G +LR   G+V ++A    +   SV+  E  T+ +G+QL  Q G  + ++E+DSL LV  L+ +++ ++E   L+ DI
Subjt:  PVSKLKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDI

Query:  RGIL
        R ++
Subjt:  RGIL

TrEMBL top hitse value%identityAlignment
A0A5C7GW84 RNase H domain-containing protein9.5e-0835.79Show/hide
Query:  KLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDI
        K+N D ++       G   V+R   G+V +S C + Q C+S  +AE   V +G++LA+  GF   V+E+D+L +V+ +  ++   SEVGL++DDI
Subjt:  KLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDI

A0A5C7HL89 RNase H domain-containing protein9.5e-0833.64Show/hide
Query:  MEVAP--VSKLKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVG
        ME +P  +   K+NIDV++    G  G G V+R   G +  +A L      S D+AE   +Y+G+ LA++ G     +E+DSL +V++  GE+   S+V 
Subjt:  MEVAP--VSKLKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVG

Query:  LLMDDIR
         ++ DI+
Subjt:  LLMDDIR

A0A6J1DBJ7 uncharacterized protein LOC1110189732.4e-1141.24Show/hide
Query:  LKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDIR
        LK+N+D + R ++  AG G ++R + G V+++A   L R   VD  EG+ VY+G+ LA + GF  F +ETDSLR+  +L  +  D SEVG+L   I+
Subjt:  LKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDIR

A0A803Q185 Uncharacterized protein5.6e-0831.68Show/hide
Query:  KLKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDIRGI
        ++K+N+D SV+   G +G GCV+RG  G+V  ++  ++QR +S    E   + KG+Q+  Q     F +E D L  ++++H +     +V  L++ IR +
Subjt:  KLKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDIRGI

Query:  L
        L
Subjt:  L

Q0JGC7 Os01g0930300 protein2.1e-0732.67Show/hide
Query:  LKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDIRGIL
        +KLN+D S  P  G+ G G VLR + G +  +AC  L R  S   AE     +G+ +A Q      +VETD L +V+++H + + +S++  L+ +++ +L
Subjt:  LKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDIRGIL

Query:  R
        +
Subjt:  R

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTCGCCCCTGTTAGTAAGCTTAAACTTAATATTGATGTTTCTGTCAGGCCTGACACAGGGGAAGCTGGGGGTGGTTGTGTGCTGCGTGGGACTGGAGGGGAGGT
CTTTATGTCGGCCTGTTTGAGCTTACAAAGGTGTTGGAGTGTGGATTTGGCTGAGGGCTGGACGGTGTATAAGGGAGTCCAACTCGCTCGACAGTTGGGGTTTGCAGAGT
TTGTGGTGGAGACTGATTCTCTGAGGTTGGTCAAAATCCTACATGGTGAGTTGCAGGATGTGTCGGAAGTGGGGCTGCTGATGGATGACATCCGAGGAATCCTCCGTCCT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTCGCCCCTGTTAGTAAGCTTAAACTTAATATTGATGTTTCTGTCAGGCCTGACACAGGGGAAGCTGGGGGTGGTTGTGTGCTGCGTGGGACTGGAGGGGAGGT
CTTTATGTCGGCCTGTTTGAGCTTACAAAGGTGTTGGAGTGTGGATTTGGCTGAGGGCTGGACGGTGTATAAGGGAGTCCAACTCGCTCGACAGTTGGGGTTTGCAGAGT
TTGTGGTGGAGACTGATTCTCTGAGGTTGGTCAAAATCCTACATGGTGAGTTGCAGGATGTGTCGGAAGTGGGGCTGCTGATGGATGACATCCGAGGAATCCTCCGTCCT
TGA
Protein sequenceShow/hide protein sequence
MEVAPVSKLKLNIDVSVRPDTGEAGGGCVLRGTGGEVFMSACLSLQRCWSVDLAEGWTVYKGVQLARQLGFAEFVVETDSLRLVKILHGELQDVSEVGLLMDDIRGILRP