; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027498 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027498
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description30S ribosomal protein S21, chloroplastic-like
Genome locationchr8:1450674..1452291
RNA-Seq ExpressionLag0027498
SyntenyLag0027498
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21
IPR038380 - Ribosomal protein S21 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAL35983.1 ribosome-like protein, partial [Cucumis sativus]4.1e-7989.01Show/hide
Query:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLS+FFSFLLPSKPPPPKPHQP IA SPSP+     QFQ+LKSRDGSVALNP +G NHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPE-EDVP
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRK+REAAKRNRRRRPQ RFTPQNKQDVPATKQE DDDNWDLPE ED+P
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPE-EDVP

KAA0042889.1 hypothetical protein E6C27_scaffold44G004060 [Cucumis melo var. makuwa]2.9e-8090.16Show/hide
Query:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLS+FFSFLLPSKPPPPKPHQPLIA SPSP      QFQ+LKSRDGSVAL P +G NHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
Subjt:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLP-EEDVPY
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRK+REAAKRNRRRRPQ RFTPQNKQDVPATKQE DDDNWDLP EED+PY
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLP-EEDVPY

KAG6581093.1 30S ribosomal protein S21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.2e-7987.85Show/hide
Query:  MASLSTFFSFLLPSKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPEE
        MASLS+FFSFLLPSKPPPPKP QPLIASPSPA     QFQ+LKSRDGSVAL+P + S HSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPEE
Subjt:  MASLSTFFSFLLPSKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPEE

Query:  RLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPEEDVPY
        RLLNRFRREVMRAGVIQECKRR+FFEN  DV+KRKSREAAKRNRRRRPQ RFTPQ+KQDVPATKQE DDDNWDLPEE +PY
Subjt:  RLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPEEDVPY

XP_004145671.1 30S ribosomal protein S21, chloroplastic [Cucumis sativus]4.1e-7989.01Show/hide
Query:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLS+FFSFLLPSKPPPPKPHQP IA SPSP+     QFQ+LKSRDGSVALNP +G NHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPE-EDVP
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRK+REAAKRNRRRRPQ RFTPQNKQDVPATKQE DDDNWDLPE ED+P
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPE-EDVP

XP_008450090.2 PREDICTED: uncharacterized protein LOC103491780, partial [Cucumis melo]2.9e-8090.16Show/hide
Query:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLS+FFSFLLPSKPPPPKPHQPLIA SPSP      QFQ+LKSRDGSVAL P +G NHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
Subjt:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPEE-DVPY
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRK+REAAKRNRRRRPQ RFTPQNKQDVPATKQE DDDNWDLPEE D+PY
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPEE-DVPY

TrEMBL top hitse value%identityAlignment
A0A0A0LDL7 Uncharacterized protein2.0e-7989.01Show/hide
Query:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLS+FFSFLLPSKPPPPKPHQP IA SPSP+     QFQ+LKSRDGSVALNP +G NHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPE-EDVP
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRK+REAAKRNRRRRPQ RFTPQNKQDVPATKQE DDDNWDLPE ED+P
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPE-EDVP

A0A1S3BNG4 uncharacterized protein LOC1034917801.4e-8090.16Show/hide
Query:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLS+FFSFLLPSKPPPPKPHQPLIA SPSP      QFQ+LKSRDGSVAL P +G NHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
Subjt:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPEE-DVPY
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRK+REAAKRNRRRRPQ RFTPQNKQDVPATKQE DDDNWDLPEE D+PY
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPEE-DVPY

A0A5D3C287 Uncharacterized protein1.4e-8090.16Show/hide
Query:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLS+FFSFLLPSKPPPPKPHQPLIA SPSP      QFQ+LKSRDGSVAL P +G NHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
Subjt:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLP-EEDVPY
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRK+REAAKRNRRRRPQ RFTPQNKQDVPATKQE DDDNWDLP EED+PY
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLP-EEDVPY

A0A6J1F281 30S ribosomal protein S21, chloroplastic-like4.5e-7987.85Show/hide
Query:  MASLSTFFSFLLPSKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPEE
        MASLS+FFSFLLPSKPPPPKP QPLIASPSPA     QFQ+LKSRDGSVAL+P + S HSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPEE
Subjt:  MASLSTFFSFLLPSKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPEE

Query:  RLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPEEDVPY
        RLLNRFRREVMRAGVIQECKRR+FFEN  DV+KRKSREAAKRNRRRRPQ RFTPQ+KQDVPATKQE DDDNWDLPEE +PY
Subjt:  RLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPEEDVPY

Q8VWX5 Ribosome-like protein (Fragment)2.0e-7989.01Show/hide
Query:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE
        MASLS+FFSFLLPSKPPPPKPHQP IA SPSP+     QFQ+LKSRDGSVALNP +G NHSEPLSAELASVICPSLA+ANTMFFRSAYNVQV+VDDNEPE
Subjt:  MASLSTFFSFLLPSKPPPPKPHQPLIA-SPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPE-EDVP
        ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRK+REAAKRNRRRRPQ RFTPQNKQDVPATKQE DDDNWDLPE ED+P
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPE-EDVP

SwissProt top hitse value%identityAlignment
A1WW12 30S ribosomal protein S217.7e-0446.43Show/hide
Query:  VIVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRR
        V V +NEP E  L RF+R   +AGV+ E +RR ++E    VRKRK   A KR+ +R
Subjt:  VIVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRR

B4U8H0 30S ribosomal protein S217.7e-0446.15Show/hide
Query:  VIVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKR
        VIV D+E  E+ + RF++ V R G++ E KRR F+E     +KRK R A KR
Subjt:  VIVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKR

B8GPU0 30S ribosomal protein S213.5e-0446.43Show/hide
Query:  VIVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRR
        V V +NEP E  L RF+R   +AGV+ E +RR F+E   ++RKRK+  A KR  +R
Subjt:  VIVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRR

P48949 30S ribosomal protein S212.0e-0446.55Show/hide
Query:  QVIVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRR
        QV+V  NEP E  L RF+R+V +AG+  + K+ +FFE  Q+  KRK  EA +R +R R
Subjt:  QVIVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRR

P82024 30S ribosomal protein S21, chloroplastic3.4e-3650.54Show/hide
Query:  ASLSTFFSFLLPSKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSVALNPHEGSN----HSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNE
        +SL  F S L PS    P    P   +P+          SL S+  S++++  +  N      E    +L +V+CPSLAF+NT++FRSAYNVQV+VDDNE
Subjt:  ASLSTFFSFLLPSKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSVALNPHEGSN----HSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNE

Query:  PEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQP--RFTPQNKQDVPATKQEGDDDNWDLPEEDVPY
         EERLLNRFRREVMRAGVIQECKRRR+FEN Q+ +KRK REAAKRN RRR  P     P  ++     K+E D DNWD+PE   P+
Subjt:  PEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQP--RFTPQNKQDVPATKQEGDDDNWDLPEEDVPY

Arabidopsis top hitse value%identityAlignment
AT3G27160.1 Ribosomal protein S21 family protein1.4e-4051.87Show/hide
Query:  SLSTFFSFLLP----SKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSV-ALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNE
        SL++F SF+ P    +KP PP    P +  PSP   Q       +  D ++ ++   E S+ +  LS+ELASVICPSLA++NT+FF S YNVQV V+DNE
Subjt:  SLSTFFSFLLP----SKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSV-ALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNE

Query:  PEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPAT----KQEGDDDNWDLPEEDVP
         EERL+NRFRREVMR GVIQECKRRR+FEN QD +KR++R+AAKRN++RRPQ RFT + +++  A     K++ ++DNW++P  DVP
Subjt:  PEERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPAT----KQEGDDDNWDLPEEDVP

AT5G63300.1 Ribosomal protein S21 family protein1.3e-2239.15Show/hide
Query:  MASLSTFFSFLLPSKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSA-YNVQVIVDDNEPE
        + SLS   S LL SKPP P   +P I  PS  + +  Q  S+ ++  +        + H + ++     V  PSLA AN +FF+S+ YNV+V+  D E E
Subjt:  MASLSTFFSFLLPSKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSA-YNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDV-----PATKQEGDDDNWDLPEED--VPY
        E+L+N F+R   RAGV+QE +RRRFFE++ + + RK++EAAK+ R+RRP P+  P +  ++      A++++  DD+W+LP ED  +PY
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDV-----PATKQEGDDDNWDLPEED--VPY

AT5G63300.2 Ribosomal protein S21 family protein1.8e-1640.82Show/hide
Query:  MASLSTFFSFLLPSKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSA-YNVQVIVDDNEPE
        + SLS   S LL SKPP P   +P I  PS  + +  Q  S+ ++  +        + H + ++     V  PSLA AN +FF+S+ YNV+V+  D E E
Subjt:  MASLSTFFSFLLPSKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSA-YNVQVIVDDNEPE

Query:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRR
        E+L+N F+R   RAGV+QE +RRRFFE++ + + RK++EAAK+ R+R
Subjt:  ERLLNRFRREVMRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTCTCCACCTTCTTCTCCTTCCTCTTACCCTCAAAACCTCCGCCCCCCAAACCCCATCAGCCGCTCATTGCCTCTCCTTCTCCGGCAGCCCCTCAGAACAT
TCAATTCCAATCCCTCAAATCCAGAGATGGATCGGTTGCCCTAAACCCCCACGAGGGTTCGAACCATTCCGAGCCCTTGTCGGCCGAATTGGCCTCCGTTATCTGTCCCT
CGCTGGCCTTCGCCAACACTATGTTCTTCCGATCGGCGTATAATGTGCAGGTGATCGTGGATGATAACGAGCCGGAGGAGCGGCTTCTGAACAGATTCCGGCGGGAGGTT
ATGAGGGCCGGCGTGATTCAGGAGTGTAAGAGGCGGAGATTCTTTGAGAATACTCAGGATGTCAGGAAGCGCAAGTCTCGCGAGGCTGCGAAACGCAACCGCCGGAGGCG
CCCACAGCCAAGATTTACACCACAGAACAAGCAGGATGTGCCTGCAACTAAGCAGGAAGGTGATGATGACAACTGGGATTTACCTGAAGAAGATGTTCCTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCTCTCCACCTTCTTCTCCTTCCTCTTACCCTCAAAACCTCCGCCCCCCAAACCCCATCAGCCGCTCATTGCCTCTCCTTCTCCGGCAGCCCCTCAGAACAT
TCAATTCCAATCCCTCAAATCCAGAGATGGATCGGTTGCCCTAAACCCCCACGAGGGTTCGAACCATTCCGAGCCCTTGTCGGCCGAATTGGCCTCCGTTATCTGTCCCT
CGCTGGCCTTCGCCAACACTATGTTCTTCCGATCGGCGTATAATGTGCAGGTGATCGTGGATGATAACGAGCCGGAGGAGCGGCTTCTGAACAGATTCCGGCGGGAGGTT
ATGAGGGCCGGCGTGATTCAGGAGTGTAAGAGGCGGAGATTCTTTGAGAATACTCAGGATGTCAGGAAGCGCAAGTCTCGCGAGGCTGCGAAACGCAACCGCCGGAGGCG
CCCACAGCCAAGATTTACACCACAGAACAAGCAGGATGTGCCTGCAACTAAGCAGGAAGGTGATGATGACAACTGGGATTTACCTGAAGAAGATGTTCCTTATTAA
Protein sequenceShow/hide protein sequence
MASLSTFFSFLLPSKPPPPKPHQPLIASPSPAAPQNIQFQSLKSRDGSVALNPHEGSNHSEPLSAELASVICPSLAFANTMFFRSAYNVQVIVDDNEPEERLLNRFRREV
MRAGVIQECKRRRFFENTQDVRKRKSREAAKRNRRRRPQPRFTPQNKQDVPATKQEGDDDNWDLPEEDVPY