| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 1.7e-171 | 45.65 | Show/hide |
Query: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
MT EIATQ++ + +K LW QSL G +R++ +L+ F RKG KM DYL MK+ D L AG+PVST +L+ Q L GLD EYNP+V + +
Subjt: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
Query: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQV
+SW ++QA+LL FE R+E N + + T NVAN ++ +++N W S+S G RGGRGRG G +
Subjt: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQV
Query: CQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIG
CQVCG H A+ C+HRFDK +S N+S +AF+A+ NS V D +WY DSGASNHVT + E+ G +V+G
Subjt: CQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIG
Query: NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISK
NGE L I TG + L + L+L+++L VP ITKNL+SVSKLA DN++ +EF +CC +KDK +G+ +LKG+L+DGLYQL+ R P
Subjt: NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISK
Query: NSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLS
S FV SV K WH+RLGHP ++VLD V+ CK++V ++ SFCE+CQ+GK H LPF SSS A+ P EL+H+D+WGPAP+++
Subjt: NSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLS
Query: TDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLT
+ GF+YYV F+DD+SR+ W+YPLK+K++ + AF F ++ NQF +IK++Q D GGEY + + GI R SCPYT QNGRAERKHRH+ E GLT
Subjt: TDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLT
Query: LLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFIS
LLAQA MPL YWW+AF AV LIN LP+ V + +SP ++ K+ ++ L++FGCACYPCL+PY+ HK Q+H+ RCV+LG+S SHKG+KCL++ GR+FIS
Subjt: LLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFIS
Query: RHVQFNELMFPF
RHV FNE FPF
Subjt: RHVQFNELMFPF
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| GAU51268.1 hypothetical protein TSUD_412550 [Trifolium subterraneum] | 4.0e-160 | 44.32 | Show/hide |
Query: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
M +IATQ++ + +K LW QSL G +++ +L+ F +RKG KM +YL MK+ +D L AGSP+S +L+ Q L GLD EYNP+V + +
Subjt: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
Query: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRG-RGGRGRGYGGYGNSNNRQ
++SW ++QA+LL FE RL+ FN+ + + + N N+ RG + N RG +N RG RGGRG+G SN +
Subjt: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRG-RGGRGRGYGGYGNSNNRQ
Query: VCQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVI
CQVC GH A+ C +RFD+ P R + + G+ SAF+A+ P D WY DSGA+NHVT + E+ G +++
Subjt: VCQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVI
Query: GNGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESIS
GNGE L I +G T L+N L+L++VL VP+ITKNL+SVSKL DN++ +EF +CC +KDK +GQ +LKG L+DGLYQL+N E C
Subjt: GNGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESIS
Query: KNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVL
K S WH++LGHP ++VLD V+ DC +++ ++ SFCE+CQFGK H LPF SSS + P LIHSD+WGPAP+L
Subjt: KNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVL
Query: STDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGL
S GF+YYV F+DD+SR+ W++PLK+K+D + AF F ++ NQF +IKI+Q D GGEY + + GI R SCPYT QNGRAERKHRHV E GL
Subjt: STDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGL
Query: TLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFI
TLLAQA MPL+YWW+AF AV LIN LP+SV +SP ++ ++ ++ L+ FGCACYPCL+PY+ HK QFH+ RCV++G+S SHKG+KC+++ GR+F+
Subjt: TLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFI
Query: SRHVQFNELMFPF
SRHV FNE FPF
Subjt: SRHVQFNELMFPF
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| KYP50444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 7.0e-173 | 45.2 | Show/hide |
Query: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
MT E+ATQ++ + ++ +W QSL G +R+ FL+ F ++RKG KM +YL MK AD+L AGS VST +LV+Q L GLD EYNPIV + +
Subjt: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
Query: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQV
++W EMQA+LL +E RLE N Q + T+N ++N + + N RG + + G+ GQ N RGGRGRG + +R V
Subjt: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQV
Query: CQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIG
CQVC +PGH+A CYHRF+K + + + ++ + N N N+ A P TV D +WY DSGASNHVT D N + E G + +G
Subjt: CQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIG
Query: NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISK
NG +L I GD+ L L+L ++L VP+ITKNL+S+SKL DND+++EFH C +KDK +G+ +L+G ++DGLYQL PG
Subjt: NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISK
Query: NSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLS
+++ N VF K WH++LGHP S+VL+ V+ C ++ E FCE+CQFGK+HNLPF S S AK P +L+HSD+WGPAP+ S
Subjt: NSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLS
Query: TDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLT
GF+YYVLFLDD+SR+ W+YPLK+K+D AF F ++V NQF +IK LQ D GGE+ + + + GI R SCPYT AQNGRAERKHRHVVE+GLT
Subjt: TDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLT
Query: LLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFIS
LLAQA MPL YWW+AF AV LIN LPT V++ KSP + L K ++ +++FGCACYPCL+PY+ HK QFH+ +CV+LG+S SHKG+KCL+++GR+FIS
Subjt: LLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFIS
Query: RHVQFNELMFPF---ALDFGKPS---SSPT-----FSPSHGPSILTWFQSLEHSHLSQENT
RHV FNE FPF L+ KP+ + PT SP+ G ++ Q L ++ S NT
Subjt: RHVQFNELMFPF---ALDFGKPS---SSPT-----FSPSHGPSILTWFQSLEHSHLSQENT
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| PNX76291.1 gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense] | 5.1e-171 | 45.01 | Show/hide |
Query: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
MT IATQ++ + + LW QSL G +R++ +L+ F +RKG KM DYL MK+ AD L AG+P+ST +L+ Q L GLD EYNP+V + +
Subjt: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
Query: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQV
+SW ++QA+LL FE R+E N ++ + T NVA ++++RG ++ +N RG NNN R GSNF RG GRGR + +
Subjt: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQV
Query: CQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIG
CQVCG H A+ C++RFDK +S N+S N+ +AF+A+ NS + D +WY DSGASNHVT + N E+ G +++G
Subjt: CQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIG
Query: NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISK
NGE L I TG + L + L+L+++L VP+ITKNL+SVSKLA DN++ +EF +CC +KDK +G+ +L+G+L+DGLYQL+ K
Subjt: NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISK
Query: NSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLS
+S+A + K WH++LGHP ++VLD V+ C +++ ++ SFCE+CQ+GK H LPF S S AK EL+H+D+WGPAP++S
Subjt: NSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLS
Query: TDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLT
+ GF+YYV F+DD++R+ W+YPLK+K+D AF F +MV NQF +IK +Q D GGEY + + GI R SCPYT QNGRAERKHRH+ E GLT
Subjt: TDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLT
Query: LLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFIS
LLAQA MPL YWW+AF AV LIN LP+SV KSP +LH ++ ++ L+ FGCACYP L+PY+ HK QFH+ RCV+LG+S SHKG+KC+++ GR+FIS
Subjt: LLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFIS
Query: RHVQFNELMFPF---ALDFGKPSSSPTFSPS
RHV FNE FPF L+ P + T SPS
Subjt: RHVQFNELMFPF---ALDFGKPSSSPTFSPS
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| PNX94503.1 putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense] | 9.5e-162 | 44.77 | Show/hide |
Query: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
MT +IATQV+ + +K LW QSL G +R+ +L+ F + K KM YL MK+ AD L AGSP+S+ +L+ Q L GLD EYNP+V + +
Subjt: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
Query: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRG-RGGRGRGYGGYGNSNNRQ
+ISW + QA+LL FE RL+ NN NN+N N + N++ N G + + RGG +N RG RGGRGR + R
Subjt: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRG-RGGRGRGYGGYGNSNNRQ
Query: VCQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVI
+CQ+CG+ GH+A CY+RFDK ++ +N G + SAFVA+ P D WY DSGASNHVT L + E G +++
Subjt: VCQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVI
Query: GNGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESIS
GNGE L I +G T L++ ++L NVL VPEITKNL+SVSKL DN+ +EF + C +KDK +G+ +LKG L+DGLYQL+ P + C+
Subjt: GNGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESIS
Query: KNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVL
I K +WH++LGHP ++VL+ V+ D +++ ++ +FCE+CQFGK H LPF SSS AK P +LIH+D+WGPAP+L
Subjt: KNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVL
Query: STDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGL
S F+YYV FLDD+SR+ W++PLK+K++ + AF+ F ++V NQF +IK+++ D GGEY + + GI + SCPYT QNGRAERKHRHV E GL
Subjt: STDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGL
Query: TLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFI
TLLAQA MPL YWW+AF AV LIN LP+SV +SP ++ K+ ++ L+ FGCACYPCL+PY+ HK QFH+ RCV+LG+S SHKG+KC+++ GRVF+
Subjt: TLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFI
Query: SRHVQFNELMFPFALDF
SRHV FNE FPF F
Subjt: SRHVQFNELMFPFALDF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151S6M8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-173 | 45.2 | Show/hide |
Query: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
MT E+ATQ++ + ++ +W QSL G +R+ FL+ F ++RKG KM +YL MK AD+L AGS VST +LV+Q L GLD EYNPIV + +
Subjt: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
Query: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQV
++W EMQA+LL +E RLE N Q + T+N ++N + + N RG + + G+ GQ N RGGRGRG + +R V
Subjt: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQV
Query: CQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIG
CQVC +PGH+A CYHRF+K + + + ++ + N N N+ A P TV D +WY DSGASNHVT D N + E G + +G
Subjt: CQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIG
Query: NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISK
NG +L I GD+ L L+L ++L VP+ITKNL+S+SKL DND+++EFH C +KDK +G+ +L+G ++DGLYQL PG
Subjt: NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISK
Query: NSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLS
+++ N VF K WH++LGHP S+VL+ V+ C ++ E FCE+CQFGK+HNLPF S S AK P +L+HSD+WGPAP+ S
Subjt: NSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLS
Query: TDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLT
GF+YYVLFLDD+SR+ W+YPLK+K+D AF F ++V NQF +IK LQ D GGE+ + + + GI R SCPYT AQNGRAERKHRHVVE+GLT
Subjt: TDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLT
Query: LLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFIS
LLAQA MPL YWW+AF AV LIN LPT V++ KSP + L K ++ +++FGCACYPCL+PY+ HK QFH+ +CV+LG+S SHKG+KCL+++GR+FIS
Subjt: LLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFIS
Query: RHVQFNELMFPF---ALDFGKPS---SSPT-----FSPSHGPSILTWFQSLEHSHLSQENT
RHV FNE FPF L+ KP+ + PT SP+ G ++ Q L ++ S NT
Subjt: RHVQFNELMFPF---ALDFGKPS---SSPT-----FSPSHGPSILTWFQSLEHSHLSQENT
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| A0A2K3LCM1 Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) | 2.4e-171 | 45.01 | Show/hide |
Query: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
MT IATQ++ + + LW QSL G +R++ +L+ F +RKG KM DYL MK+ AD L AG+P+ST +L+ Q L GLD EYNP+V + +
Subjt: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
Query: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQV
+SW ++QA+LL FE R+E N ++ + T NVA ++++RG ++ +N RG NNN R GSNF RG GRGR + +
Subjt: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQV
Query: CQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIG
CQVCG H A+ C++RFDK +S N+S N+ +AF+A+ NS + D +WY DSGASNHVT + N E+ G +++G
Subjt: CQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIG
Query: NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISK
NGE L I TG + L + L+L+++L VP+ITKNL+SVSKLA DN++ +EF +CC +KDK +G+ +L+G+L+DGLYQL+ K
Subjt: NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISK
Query: NSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLS
+S+A + K WH++LGHP ++VLD V+ C +++ ++ SFCE+CQ+GK H LPF S S AK EL+H+D+WGPAP++S
Subjt: NSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLS
Query: TDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLT
+ GF+YYV F+DD++R+ W+YPLK+K+D AF F +MV NQF +IK +Q D GGEY + + GI R SCPYT QNGRAERKHRH+ E GLT
Subjt: TDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLT
Query: LLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFIS
LLAQA MPL YWW+AF AV LIN LP+SV KSP +LH ++ ++ L+ FGCACYP L+PY+ HK QFH+ RCV+LG+S SHKG+KC+++ GR+FIS
Subjt: LLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFIS
Query: RHVQFNELMFPF---ALDFGKPSSSPTFSPS
RHV FNE FPF L+ P + T SPS
Subjt: RHVQFNELMFPF---ALDFGKPSSSPTFSPS
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| A0A2K3MUJ9 Putative retrotransposon Ty1-copia subclass protein (Fragment) | 4.6e-162 | 44.77 | Show/hide |
Query: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
MT +IATQV+ + +K LW QSL G +R+ +L+ F + K KM YL MK+ AD L AGSP+S+ +L+ Q L GLD EYNP+V + +
Subjt: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
Query: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRG-RGGRGRGYGGYGNSNNRQ
+ISW + QA+LL FE RL+ NN NN+N N + N++ N G + + RGG +N RG RGGRGR + R
Subjt: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRG-RGGRGRGYGGYGNSNNRQ
Query: VCQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVI
+CQ+CG+ GH+A CY+RFDK ++ +N G + SAFVA+ P D WY DSGASNHVT L + E G +++
Subjt: VCQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVI
Query: GNGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESIS
GNGE L I +G T L++ ++L NVL VPEITKNL+SVSKL DN+ +EF + C +KDK +G+ +LKG L+DGLYQL+ P + C+
Subjt: GNGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESIS
Query: KNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVL
I K +WH++LGHP ++VL+ V+ D +++ ++ +FCE+CQFGK H LPF SSS AK P +LIH+D+WGPAP+L
Subjt: KNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVL
Query: STDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGL
S F+YYV FLDD+SR+ W++PLK+K++ + AF+ F ++V NQF +IK+++ D GGEY + + GI + SCPYT QNGRAERKHRHV E GL
Subjt: STDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGL
Query: TLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFI
TLLAQA MPL YWW+AF AV LIN LP+SV +SP ++ K+ ++ L+ FGCACYPCL+PY+ HK QFH+ RCV+LG+S SHKG+KC+++ GRVF+
Subjt: TLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFI
Query: SRHVQFNELMFPFALDF
SRHV FNE FPF F
Subjt: SRHVQFNELMFPFALDF
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| A0A2Z6MBG6 Integrase catalytic domain-containing protein | 8.4e-172 | 45.65 | Show/hide |
Query: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
MT EIATQ++ + +K LW QSL G +R++ +L+ F RKG KM DYL MK+ D L AG+PVST +L+ Q L GLD EYNP+V + +
Subjt: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
Query: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQV
+SW ++QA+LL FE R+E N + + T NVAN ++ +++N W S+S G RGGRGRG G +
Subjt: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQV
Query: CQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIG
CQVCG H A+ C+HRFDK +S N+S +AF+A+ NS V D +WY DSGASNHVT + E+ G +V+G
Subjt: CQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIG
Query: NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISK
NGE L I TG + L + L+L+++L VP ITKNL+SVSKLA DN++ +EF +CC +KDK +G+ +LKG+L+DGLYQL+ R P
Subjt: NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISK
Query: NSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLS
S FV SV K WH+RLGHP ++VLD V+ CK++V ++ SFCE+CQ+GK H LPF SSS A+ P EL+H+D+WGPAP+++
Subjt: NSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLS
Query: TDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLT
+ GF+YYV F+DD+SR+ W+YPLK+K++ + AF F ++ NQF +IK++Q D GGEY + + GI R SCPYT QNGRAERKHRH+ E GLT
Subjt: TDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLT
Query: LLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFIS
LLAQA MPL YWW+AF AV LIN LP+ V + +SP ++ K+ ++ L++FGCACYPCL+PY+ HK Q+H+ RCV+LG+S SHKG+KCL++ GR+FIS
Subjt: LLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFIS
Query: RHVQFNELMFPF
RHV FNE FPF
Subjt: RHVQFNELMFPF
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| A0A2Z6P4D5 Integrase catalytic domain-containing protein | 1.9e-160 | 44.32 | Show/hide |
Query: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
M +IATQ++ + +K LW QSL G +++ +L+ F +RKG KM +YL MK+ +D L AGSP+S +L+ Q L GLD EYNP+V + +
Subjt: MTPEIATQVMGFDNAKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG
Query: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRG-RGGRGRGYGGYGNSNNRQ
++SW ++QA+LL FE RL+ FN+ + + + N N+ RG + N RG +N RG RGGRG+G SN +
Subjt: DISWSEMQAELLVFEKRLELQNTQKAVVSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRG-RGGRGRGYGGYGNSNNRQ
Query: VCQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVI
CQVC GH A+ C +RFD+ P R + + G+ SAF+A+ P D WY DSGA+NHVT + E+ G +++
Subjt: VCQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVI
Query: GNGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESIS
GNGE L I +G T L+N L+L++VL VP+ITKNL+SVSKL DN++ +EF +CC +KDK +GQ +LKG L+DGLYQL+N E C
Subjt: GNGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESIS
Query: KNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVL
K S WH++LGHP ++VLD V+ DC +++ ++ SFCE+CQFGK H LPF SSS + P LIHSD+WGPAP+L
Subjt: KNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVL
Query: STDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGL
S GF+YYV F+DD+SR+ W++PLK+K+D + AF F ++ NQF +IKI+Q D GGEY + + GI R SCPYT QNGRAERKHRHV E GL
Subjt: STDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGL
Query: TLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFI
TLLAQA MPL+YWW+AF AV LIN LP+SV +SP ++ ++ ++ L+ FGCACYPCL+PY+ HK QFH+ RCV++G+S SHKG+KC+++ GR+F+
Subjt: TLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLSASGRVFI
Query: SRHVQFNELMFPF
SRHV FNE FPF
Subjt: SRHVQFNELMFPF
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 4.8e-39 | 27.79 | Show/hide |
Query: GNSNNRQVCQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDS-NWYADSGASNHVTGDFNNLANTKEY
GNS + C CGR GH C+H K N N+ + + + G AF+ + +V+D+ + DSGAS+H+ D + ++ E
Subjt: GNSNNRQVCQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYACPETVIDS-NWYADSGASNHVTGDFNNLANTKEY
Query: GGNEQVVIG-NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGV
++ + GE + T G L N I +L +VL E NL+SV +L Q+ + IEF +SG + K L
Subjt: GGNEQVVIG-NGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGV
Query: NEGCSESISKNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCK-LQVKENEMLS-------------FCESCQFGKSHNLPFP-
+ KNS N+ V Y ++ + +WH+R GH I+D K L++K M S CE C GK LPF
Subjt: NEGCSESISKNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCK-LQVKENEMLS-------------FCESCQFGKSHNLPFP-
Query: -LSSSRAKYPFELIHSDLWGPAPVLSTDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYA--RIHQECYRLGII
+ K P ++HSD+ GP ++ D Y+V+F+D ++ Y Y +K K+D + F F++ F ++ L DNG EY + Q C + GI
Subjt: -LSSSRAKYPFELIHSDLWGPAPVLSTDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYA--RIHQECYRLGII
Query: SRYSCPYTFAQNGRAERKHRHVVETGLTLLAQASMPLQYWWDAFLAAVQLINGLPTSVL--EGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQ
+ P+T NG +ER R + E T+++ A + +W +A L A LIN +P+ L K+P E+ H+KK LR FG Y ++ KF
Subjt: SRYSCPYTFAQNGRAERKHRHVVETGLTLLAQASMPLQYWWDAFLAAVQLINGLPTSVL--EGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQ
Query: FHSERCVYLGFSPSHKGHKCLSASGRVFI
S + +++G+ P+ G K A FI
Subjt: FHSERCVYLGFSPSHKGHKCLSASGRVFI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-46 | 28.14 | Show/hide |
Query: GRGRGY----------GGYGNSNNR-----QVCQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQ---NPNNSGNSGNTQPPSAFVANSNSQYACPE-TVI
GRGR Y G G S NR + C C +PGH C PN +G + N+ + Q V N + C +
Subjt: GRGRGY----------GGYGNSNNR-----QVCQVCGRPGHSALMCYHRFDKEFSPNVNRGGNQ---NPNNSGNSGNTQPPSAFVANSNSQYACPE-TVI
Query: DSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIGNGESLPITFTGDTYL-SNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDK
+S W D+ AS+H T +L G V +GN I GD + +N L L +V VP++ NL +S +A D D + + + K
Subjt: DSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIGNGESLPITFTGDTYL-SNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDK
Query: RSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISKNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCES
S + KGV R LY+ N +N E +S ++WHKR+GH + + L + + + + C+
Subjt: RSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISKNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQVKENEMLSFCES
Query: CQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLSTDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYA--R
C FGK H + F SS R +L++SD+ GP + S G +Y+V F+DD SR LW+Y LK K+ F F ++V + G ++K L+SDNGGEY
Subjt: CQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLSTDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYA--R
Query: IHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLTLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCL
+ C GI + P T NG AER +R +VE ++L A +P +W +A A LIN P+ L + P V +K+++++ L+ FGC + +
Subjt: IHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLTLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCL
Query: RPYHNHKFQFHSERCVYLGFSPSHKGHKCLS-ASGRVFISRHVQFNELMFPFALDFGK
K S C+++G+ G++ +V SR V F E A D +
Subjt: RPYHNHKFQFHSERCVYLGFSPSHKGHKCLS-ASGRVFISRHVQFNELMFPFALDFGK
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| Q07791 Transposon Ty2-DR3 Gag-Pol polyprotein | 2.4e-22 | 24.89 | Show/hide |
Query: PETVIDSN------WYADSGASNHVTGDFNNLANTKEYGGNEQVVIGNGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEF
P IDSN DSGAS + + L + +V + +PI G+ + + + L P I +L+S+S+LA N
Subjt: PETVIDSN------WYADSGASNHVTGDFNNLANTKEYGGNEQVVIGNGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEF
Query: HGDCCIIKD--KRSGQEVLKGVLRDG-LYQLNNVTRVPGVNEGCSESISKNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVI-NDCK
C ++ +RS VL +++ G Y L+ +P ISK T NN + V++YP + H+ LGH R + + +
Subjt: HGDCCIIKD--KRSGQEVLKGVLRDG-LYQLNNVTRVPGVNEGCSESISKNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVI-NDCK
Query: LQVKE------NEMLSFCESCQFGKSHNLPFPLSSSRAKY-----PFELIHSDLWGPAPVLSTDGFQYYVLFLDDYSRYLWLYPL--KKKNDALAAFHHF
+KE N C C GKS + SR KY PF+ +H+D++GP L Y++ F D+ +R+ W+YPL +++ L F
Subjt: LQVKE------NEMLSFCESCQFGKSHNLPFPLSSSRAKY-----PFELIHSDLWGPAPVLSTDGFQYYVLFLDDYSRYLWLYPL--KKKNDALAAFHHF
Query: ISMVRNQFGCQIKILQSDNGGEYAR--IHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLTLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGK
++ ++NQF ++ ++Q D G EY +H+ GI + Y+ +G AER +R ++ TLL + +P W+ A + + N L S K
Subjt: ISMVRNQFGCQIKILQSDNGGEYAR--IHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLTLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGK
Query: SPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGH
S + L+ + FG P + HN + H PS +
Subjt: SPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGH
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.7e-105 | 35.4 | Show/hide |
Query: AKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG-DISWSEMQAELLV
A +W ++ ++ S LR +Q KGT + DY++ + + D L G P+ V +VL L EEY P++ I + + +E+ LL
Subjt: AKDLWSAIQSLFGIQSRAEEDFLRQTFQQSRKGTSKMTDYLRLMKSHADNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG-DISWSEMQAELLV
Query: FEKRLELQNTQKAVVSFNHTP-TVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQ----VCQVCGRPG
E ++ AV S P T N +++N NNN +NG R Y+N NN + + + N+N + CQ+CG G
Subjt: FEKRLELQNTQKAVVSFNHTP-TVNVANNKNNMNQNNNRGWNYSHSNGQRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQ----VCQVCGRPG
Query: HSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVA-NSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIGNGESLPI
HSA C + F +VN + QPPS F + A +NW DSGA++H+T DFNNL+ + Y G + V++ +G ++PI
Subjt: HSALMCYHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVA-NSNSQYACPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIGNGESLPI
Query: TFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISKNSTANNH
+ TG T LS + L+L+N+L VP I KNL+SV +L N V +EF +KD +G +L+G +D LY+ + P + S+ H
Subjt: TFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCCIIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISKNSTANNH
Query: SSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQV--KENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLSTDGFQ
SS WH RLGHPA +L+ VI++ L V ++ LS C C KS+ +PF S+ + P E I+SD+W +P+LS D ++
Subjt: SSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQV--KENEMLSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLSTDGFQ
Query: YYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLTLLAQA
YYV+F+D ++RY WLYPLK+K+ F F +++ N+F +I SDNGGE+ + + + GI S P+T NG +ERKHRH+VETGLTLL+ A
Subjt: YYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGGEYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLTLLAQA
Query: SMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLS-ASGRVFISRHVQ
S+P YW AF AV LIN LPT +L+ +SP + L N+ LR FGCACYP LRPY+ HK S +CV+LG+S + + CL + R++ISRHV+
Subjt: SMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCACYPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLS-ASGRVFISRHVQ
Query: FNELMFPFA
F+E FPF+
Subjt: FNELMFPFA
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.0e-97 | 35.66 | Show/hide |
Query: DNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG-DISWSEMQAELLVFEKRLELQNTQKAV-VSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNG
D L G P+ V +VL L ++Y P++ I + S +E+ L+ E +L N+ + V ++ N N N+N N+ +NR NY+++N
Subjt: DNLGQAGSPVSTRNLVSQVLLGLDEEYNPIVAMIHGRG-DISWSEMQAELLVFEKRLELQNTQKAV-VSFNHTPTVNVANNKNNMNQNNNRGWNYSHSNG
Query: QRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQVCQVCGRPGHSALMC--YHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYA
+ + ++ GS +N + + GR CQ+C GHSA C H+F Q+ N S T P + + +N
Subjt: QRGQFYNNNQRGGSNFNNGRGRGGRGRGYGGYGNSNNRQVCQVCGRPGHSALMC--YHRFDKEFSPNVNRGGNQNPNNSGNSGNTQPPSAFVANSNSQYA
Query: CPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIGNGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCC
P +NW DSGA++H+T DFNNL+ + Y G + V+I +G ++PIT TG L + L LN VL VP I KNL+SV +L N V +EF
Subjt: CPETVIDSNWYADSGASNHVTGDFNNLANTKEYGGNEQVVIGNGESLPITFTGDTYLSNGAAILSLNNVLCVPEITKNLVSVSKLAQDNDVFIEFHGDCC
Query: IIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISKNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQV-KENEM
+KD +G +L+G +D LY+ P + + + HSS WH RLGHP+ +L+ VI++ L V +
Subjt: IIKDKRSGQEVLKGVLRDGLYQLNNVTRVPGVNEGCSESISKNSTANNHSSVFVVSRYPLSVNIIVSKNVWHKRLGHPASRVLDFVINDCKLQV-KENEM
Query: LSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLSTDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGG
L C C KSH +PF S+ + P E I+SD+W +P+LS D ++YYV+F+D ++RY WLYPLK+K+ F F S+V N+F +I L SDNGG
Subjt: LSFCESCQFGKSHNLPFPLSSSRAKYPFELIHSDLWGPAPVLSTDGFQYYVLFLDDYSRYLWLYPLKKKNDALAAFHHFISMVRNQFGCQIKILQSDNGG
Query: EYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLTLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCAC
E+ + + GI S P+T NG +ERKHRH+VE GLTLL+ AS+P YW AF AV LIN LPT +L+ +SP + L + N+ L+ FGCAC
Subjt: EYARIHQECYRLGIISRYSCPYTFAQNGRAERKHRHVVETGLTLLAQASMPLQYWWDAFLAAVQLINGLPTSVLEGKSPLEVLHHKKLNFAGLRSFGCAC
Query: YPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLS-ASGRVFISRHVQFNELMFPFA-LDFGKPSSSPTFSPS
YP LRPY+ HK + S++C ++G+S + + CL +GR++ SRHVQF+E FPF+ +FG +S S S
Subjt: YPCLRPYHNHKFQFHSERCVYLGFSPSHKGHKCLS-ASGRVFISRHVQFNELMFPFA-LDFGKPSSSPTFSPS
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