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Lag0027545 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027545
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-type domain-containing protein
Genome locationchr8:1891127..1892239
RNA-Seq ExpressionLag0027545
SyntenyLag0027545
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585198.1 E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia]8.9e-1784.75Show/hide
Query:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        MYYRLSR  SSCKDSLK+LEEDVNRANAL  AIPR KHGSYLQMKLVY+Q APLF FLM
Subjt:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

KAG7020116.1 RING finger protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]8.9e-1784.75Show/hide
Query:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        MYYRLSR  SSCKDSLK+LEEDVNRANAL  AIPR KHGSYLQMKLVY+Q APLF FLM
Subjt:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

XP_022131399.1 RING-H2 finger protein ATL47-like [Momordica charantia]2.8e-1884.75Show/hide
Query:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        MYYRL+RSSSSCKDS+K+LEEDV RANAL AAIPR KHGSYLQMKLVYN  APLF FLM
Subjt:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

XP_022951171.1 uncharacterized protein LOC111454098 [Cucurbita moschata]8.9e-1784.75Show/hide
Query:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        MYYRLSR  SSCKDSLK+LEEDVNRANAL  AIPR KHGSYLQMKLVY+Q APLF FLM
Subjt:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

XP_023536785.1 uncharacterized protein LOC111798063 [Cucurbita pepo subsp. pepo]8.9e-1784.75Show/hide
Query:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        MYYRLSR  SSCKDSLK+LEEDVNRANAL  AIPR KHGSYLQMKLVY+Q APLF FLM
Subjt:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

TrEMBL top hitse value%identityAlignment
A0A6J1BQ55 RING-H2 finger protein ATL47-like1.3e-1884.75Show/hide
Query:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        MYYRL+RSSSSCKDS+K+LEEDV RANAL AAIPR KHGSYLQMKLVYN  APLF FLM
Subjt:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

A0A6J1GGU1 uncharacterized protein LOC1114540984.3e-1784.75Show/hide
Query:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        MYYRLSR  SSCKDSLK+LEEDVNRANAL  AIPR KHGSYLQMKLVY+Q APLF FLM
Subjt:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

A0A6J1HBV1 E3 ubiquitin-protein ligase CHFR-like isoform X14.7e-1681.36Show/hide
Query:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        MYYR++R  SSCKDSLK+LEEDV RANAL AAIPR KHGSYLQMKLVYNQ APL  FLM
Subjt:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

A0A6J1HDV0 uncharacterized protein LOC111462660 isoform X24.7e-1681.36Show/hide
Query:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        MYYR++R  SSCKDSLK+LEEDV RANAL AAIPR KHGSYLQMKLVYNQ APL  FLM
Subjt:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

A0A6J1KIH2 uncharacterized protein LOC1114960612.1e-1683.05Show/hide
Query:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        MYYRLSR  SSCKDSLK+LEEDVNRANAL  AIPR KHGSYLQMKLVY+Q APL  FLM
Subjt:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

SwissProt top hitse value%identityAlignment
Q9M022 E3 ubiquitin-protein ligase AIRP24.0e-0448.98Show/hide
Query:  SCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        S KDSLK LE D+  AN L +  P    G Y+QM+L Y+  A LF FL+
Subjt:  SCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

Arabidopsis top hitse value%identityAlignment
AT1G13195.1 RING/U-box superfamily protein1.4e-0755.56Show/hide
Query:  SRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        S SSSS  +SLK+LE DV  AN+L  AIP  K+   LQMKLV++ FA L  FL+
Subjt:  SRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

AT1G24440.1 RING/U-box superfamily protein2.5e-0955.93Show/hide
Query:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        MYY+L++  SS +DSLKILE D+  AN L A IP  K G  LQMKLV +  AP F FL+
Subjt:  MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

AT5G01520.1 RING/U-box superfamily protein2.9e-0548.98Show/hide
Query:  SCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        S KDSLK LE D+  AN L +  P    G Y+QM+L Y+  A LF FL+
Subjt:  SCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

AT5G01520.2 RING/U-box superfamily protein2.9e-0548.98Show/hide
Query:  SCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        S KDSLK LE D+  AN L +  P    G Y+QM+L Y+  A LF FL+
Subjt:  SCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM

AT5G58787.1 RING/U-box superfamily protein2.9e-0548.98Show/hide
Query:  SCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM
        S KDSLK LE D+  AN L    PR K G+ +QM+L Y+  A  F FL+
Subjt:  SCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTATCGACTATCGAGGTCTTCTAGTTCTTGTAAGGATTCTCTAAAAATCCTCGAAGAAGATGTAAATCGCGCCAATGCTCTGGTTGCTGCAATTCCAAGAACCAA
ACATGGTTCATATCTCCAAATGAAATTGGTTTACAATCAATTTGCCCCACTCTTTCATTTTTTGATGTTTACAAAGATGGAAGGCCTAATATATCTGCACATGGAAGAAA
GGCAACTATCAAAGATTTCTATGGAAAAAGGTGACTACCAAACTGATTATGTTCCAGCTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTATCGACTATCGAGGTCTTCTAGTTCTTGTAAGGATTCTCTAAAAATCCTCGAAGAAGATGTAAATCGCGCCAATGCTCTGGTTGCTGCAATTCCAAGAACCAA
ACATGGTTCATATCTCCAAATGAAATTGGTTTACAATCAATTTGCCCCACTCTTTCATTTTTTGATGTTTACAAAGATGGAAGGCCTAATATATCTGCACATGGAAGAAA
GGCAACTATCAAAGATTTCTATGGAAAAAGGTGACTACCAAACTGATTATGTTCCAGCTCCATGA
Protein sequenceShow/hide protein sequence
MYYRLSRSSSSCKDSLKILEEDVNRANALVAAIPRTKHGSYLQMKLVYNQFAPLFHFLMFTKMEGLIYLHMEERQLSKISMEKGDYQTDYVPAP