| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 3.3e-150 | 45.23 | Show/hide |
Query: IEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERF
+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE K ++ AY T++L LS+ VLR V + T ++W KL +LY TK NK+Y++E+F
Subjt: IEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERF
Query: FTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKES----SEGFFVKGKR
F +KMD +K L ENLDEF+++ + N+GEK+SDEN+A +LLNSLP+ Y+EVK +KYG +++T +++ A++T+ LEI+ ++K+ + G K
Subjt: FTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKES----SEGFFVKGKR
Query: KGKDNKHQPDEKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSIT--YSDALATSDQCSNDQSSFEKHD------------WVI
KGK+ + K K++ +C CHKEGH K++C NK +EA+ E ++T Y+ A T D C + ++ +E + W++
Subjt: KGKDNKHQPDEKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSIT--YSDALATSDQCSNDQSSFEKHD------------WVI
Query: DSGCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGV
DSGC+FHMT + + + + + DG V +G+N TC V G SV + DG V++L NVR+VP LKRNLISLG LD GCT +G++++ + + L G
Subjt: DSGCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGV
Query: KINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPAST
+GLYV++ + SA + S + S LWHKRL+H+ E+GLQ L++QG+L L F EHC++GK+ R F K + T+KGIL+Y+HSDLWGP
Subjt: KINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPAST
Query: NSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIME
S+ GSRYF+S IDDFSRK W+Y LK KD+AF KF EWK +E QT R VK LRTDNGLE+ N F+ FCK+ G+ RH TV +TPQQNG+AER NRTIME
Subjt: NSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIME
Query: RVRCQLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
R RC LT+A L ++W EAA Y +NR T++N T
Subjt: RVRCQLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
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| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 6.7e-151 | 45.54 | Show/hide |
Query: IEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERF
+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE K ++ AY T++L LS+ VLR V + T ++W KL +LY TK NK+Y++E+F
Subjt: IEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERF
Query: FTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKES----SEGFFVKGKR
F +KMD +KSL ENLDEF+++ + N+GEK+SDEN+A +LLNSLP+ Y+EVK +KYGR+++T +++ A++T+ LEI+ ++K+ + G K
Subjt: FTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKES----SEGFFVKGKR
Query: KGKDNKHQPDEKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSIT--YSDALATSDQCSNDQSSFEKHD------------WVI
KGK+ + K K++ +C CHKEGH K++C NK +EA+ E ++T Y+ A T D + ++ +E + W++
Subjt: KGKDNKHQPDEKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSIT--YSDALATSDQCSNDQSSFEKHD------------WVI
Query: DSGCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGV
DSGC+FHMT + + + + + DG V +G+N TC V G SV + DG V++L NVR+VP LKRNLISLG LD GCT +G++++ + + L G
Subjt: DSGCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGV
Query: KINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPAST
+GLYV++ + SA + S S LWHKRL+H+ E+GLQ L++QG+L L F EHC++GK+ R F K + T+KGIL+YVHSDLWGP
Subjt: KINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPAST
Query: NSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIME
S+ GSRYF+S IDDFSRK W+Y LK KD+AF KF EWK +E QT R VK LRTDNGLE+ N F+ FCK+ G+ RH TV +TPQQNG+AER NRTIME
Subjt: NSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIME
Query: RVRCQLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
R RC LT+A L ++W EAA Y +NR T++N T
Subjt: RVRCQLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
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| KAD3641560.1 hypothetical protein E3N88_30784 [Mikania micrantha] | 1.4e-132 | 42.22 | Show/hide |
Query: KANIEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMR
K +IEKF+GK DF LW+ K++A+L + + AL LP L++ K+ + A+ +IL+L + VLR+V E T +WTKL +LY TK N++Y++
Subjt: KANIEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMR
Query: ERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKK-ESSEGFFVKGKR
+R +TF+M + KSL ++ DEF ++ + +N+ ++ +E+ A + L+SLP Y+ TL +GRE+++ E +++A+ ++EL+ + K E S+G FV+G+
Subjt: ERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKK-ESSEGFFVKGKR
Query: KGKDNKHQPD--EKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEA-AVGENSITYSDALATSDQCSNDQSSFEKHDWVIDSGCSFHMTHF
+ +D K + KSK K+RC C+ + HLKR C K+K + + K K Q + + E S+ D+ D + S +WV+DSGCSFHMT
Subjt: KGKDNKHQPD--EKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEA-AVGENSITYSDALATSDQCSNDQSSFEKHDWVIDSGCSFHMTHF
Query: KGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGVKINGLYVVKDI
K +F D V++G+N C+V G+ +VS KL +GS+ L+ VR++P LKRNLISLGM +S G G +++ + +VL+G + N D
Subjt: KGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGVKINGLYVVKDI
Query: EMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNSLSGSRYFLS
E+ ++ V+E G S++ LWH R+ HI GLQ L +QG+L GF EHCV+GKA R F +S +KGIL+Y+H+DLWGP+ SL G+RYFLS
Subjt: EMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNSLSGSRYFLS
Query: FIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRCQLTDAIL
+D +SR+ WV+ LKSKD+ F KFKEWK M+E QT R VK LRTDNGLE+CN+ FD FCK G+ RH +V TPQQNG+ ER+N T++ +VRC L +A L
Subjt: FIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRCQLTDAIL
Query: VERYWAEAASYTVYTLNRCTHTS
+++WAEA S V+ +N C+ +S
Subjt: VERYWAEAASYTVYTLNRCTHTS
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| PNX96445.1 copia LTR rider [Trifolium pratense] | 8.0e-136 | 42.99 | Show/hide |
Query: KANIEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMR
K IEKF G DF LW+ K+KA+L Q+ L+AL + + LT K + A+ ++L+L + VLRQV E T +W KL +LY TK N++Y++
Subjt: KANIEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMR
Query: ERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKESS--EGFFVKGK
+ ++FKM K L+E LD F ++ + +N+ KI DE++A +LL +LP ++ K TL YGRE++T E + SA+ +K+L + + K S+ EG VKGK
Subjt: ERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKESS--EGFFVKGK
Query: RKGKDNKHQPDEKSKAK--------VRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQ-EAAVGENSITYSDALATSDQCSNDQSSFEKHDWVIDSGC
K+ K KS++K +RC +C KEGH ++ C +R K + AA+ ++ SD L S SS + +W++DSGC
Subjt: RKGKDNKHQPDEKSKAK--------VRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQ-EAAVGENSITYSDALATSDQCSNDQSSFEKHDWVIDSGC
Query: SFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGVKING
++HMT K F C+ DG V +GNN C++ G+ SV KL D S++LL VR+VP+LKRNL+SLG D G + G ++ + + K VL GVK G
Subjt: SFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGVKING
Query: LYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNSLS
LY ++ + S VVS S++++WH RL H+ E+GL L +Q +L + L F E CV GK+ R F K +Q + G L+Y+H+DLWGPA S S
Subjt: LYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNSLS
Query: GSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRC
G+RYFLS +DD+SRK WV+ K+KD+ FE FK WKT++E QT R VK LRTDNGLE+CN FD FC G+ RH T TPQQNG+AER NRTI+ERVRC
Subjt: GSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRC
Query: QLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
LT A L + +WAEA S Y +NRC T+++ T
Subjt: QLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 8.8e-151 | 45.54 | Show/hide |
Query: IEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERF
+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE K ++ AY T++L LS+ VLR V + T ++W KL +LY TK NK+Y++E+F
Subjt: IEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERF
Query: FTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKES----SEGFFVKGKR
F +KMD +KSL ENLDEF+++ + N+GEK+SDEN+A +LLNSLP+ Y+EVK +KYGR+++T +++ A++T+ LEI+ ++K+ + G K
Subjt: FTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKES----SEGFFVKGKR
Query: KGKDNKHQPDEKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSIT--YSDALATSDQCSNDQSSFEKHD------------WVI
KGK+ + K K++ +C CHKEGH K++C NK +EA+ E ++T Y+ A T D + ++ +E + W++
Subjt: KGKDNKHQPDEKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSIT--YSDALATSDQCSNDQSSFEKHD------------WVI
Query: DSGCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGV
DSGC+FHMT + + + + + DG V +G+N TC V G SV + DG V++L NVR+VP LKRNLISLG LD GCT +G++++ + + L G
Subjt: DSGCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGV
Query: KINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPAST
+GLYV++ + SA + S S LWHKRL+H+ E+GLQ L++QG+L L F EHC++GK+ R F K + T+KGIL+YVHSDLWGP
Subjt: KINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPAST
Query: NSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIME
S+ GSRYF+S IDDFSRK W+Y LK KD+AF KF EWK +E QT R VK LRTDNGLE+ N F+ FCK+ G+ RH TV +TPQQNG+AER NRTIME
Subjt: NSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIME
Query: RVRCQLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
R RC LT+A L ++W EAA Y +NR T++N T
Subjt: RVRCQLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2K3N065 Copia LTR rider | 3.9e-136 | 42.99 | Show/hide |
Query: KANIEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMR
K IEKF G DF LW+ K+KA+L Q+ L+AL + + LT K + A+ ++L+L + VLRQV E T +W KL +LY TK N++Y++
Subjt: KANIEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMR
Query: ERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKESS--EGFFVKGK
+ ++FKM K L+E LD F ++ + +N+ KI DE++A +LL +LP ++ K TL YGRE++T E + SA+ +K+L + + K S+ EG VKGK
Subjt: ERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKESS--EGFFVKGK
Query: RKGKDNKHQPDEKSKAK--------VRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQ-EAAVGENSITYSDALATSDQCSNDQSSFEKHDWVIDSGC
K+ K KS++K +RC +C KEGH ++ C +R K + AA+ ++ SD L S SS + +W++DSGC
Subjt: RKGKDNKHQPDEKSKAK--------VRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQ-EAAVGENSITYSDALATSDQCSNDQSSFEKHDWVIDSGC
Query: SFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGVKING
++HMT K F C+ DG V +GNN C++ G+ SV KL D S++LL VR+VP+LKRNL+SLG D G + G ++ + + K VL GVK G
Subjt: SFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGVKING
Query: LYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNSLS
LY ++ + S VVS S++++WH RL H+ E+GL L +Q +L + L F E CV GK+ R F K +Q + G L+Y+H+DLWGPA S S
Subjt: LYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNSLS
Query: GSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRC
G+RYFLS +DD+SRK WV+ K+KD+ FE FK WKT++E QT R VK LRTDNGLE+CN FD FC G+ RH T TPQQNG+AER NRTI+ERVRC
Subjt: GSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRC
Query: QLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
LT A L + +WAEA S Y +NRC T+++ T
Subjt: QLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
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| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 1.6e-150 | 45.23 | Show/hide |
Query: IEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERF
+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE K ++ AY T++L LS+ VLR V + T ++W KL +LY TK NK+Y++E+F
Subjt: IEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERF
Query: FTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKES----SEGFFVKGKR
F +KMD +K L ENLDEF+++ + N+GEK+SDEN+A +LLNSLP+ Y+EVK +KYG +++T +++ A++T+ LEI+ ++K+ + G K
Subjt: FTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKES----SEGFFVKGKR
Query: KGKDNKHQPDEKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSIT--YSDALATSDQCSNDQSSFEKHD------------WVI
KGK+ + K K++ +C CHKEGH K++C NK +EA+ E ++T Y+ A T D C + ++ +E + W++
Subjt: KGKDNKHQPDEKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSIT--YSDALATSDQCSNDQSSFEKHD------------WVI
Query: DSGCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGV
DSGC+FHMT + + + + + DG V +G+N TC V G SV + DG V++L NVR+VP LKRNLISLG LD GCT +G++++ + + L G
Subjt: DSGCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGV
Query: KINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPAST
+GLYV++ + SA + S + S LWHKRL+H+ E+GLQ L++QG+L L F EHC++GK+ R F K + T+KGIL+Y+HSDLWGP
Subjt: KINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPAST
Query: NSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIME
S+ GSRYF+S IDDFSRK W+Y LK KD+AF KF EWK +E QT R VK LRTDNGLE+ N F+ FCK+ G+ RH TV +TPQQNG+AER NRTIME
Subjt: NSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIME
Query: RVRCQLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
R RC LT+A L ++W EAA Y +NR T++N T
Subjt: RVRCQLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
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| A0A5A7UB25 Putative gag-pol polyprotein | 3.3e-151 | 45.54 | Show/hide |
Query: IEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERF
+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE K ++ AY T++L LS+ VLR V + T ++W KL +LY TK NK+Y++E+F
Subjt: IEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERF
Query: FTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKES----SEGFFVKGKR
F +KMD +KSL ENLDEF+++ + N+GEK+SDEN+A +LLNSLP+ Y+EVK +KYGR+++T +++ A++T+ LEI+ ++K+ + G K
Subjt: FTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKES----SEGFFVKGKR
Query: KGKDNKHQPDEKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSIT--YSDALATSDQCSNDQSSFEKHD------------WVI
KGK+ + K K++ +C CHKEGH K++C NK +EA+ E ++T Y+ A T D + ++ +E + W++
Subjt: KGKDNKHQPDEKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSIT--YSDALATSDQCSNDQSSFEKHD------------WVI
Query: DSGCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGV
DSGC+FHMT + + + + + DG V +G+N TC V G SV + DG V++L NVR+VP LKRNLISLG LD GCT +G++++ + + L G
Subjt: DSGCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGV
Query: KINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPAST
+GLYV++ + SA + S S LWHKRL+H+ E+GLQ L++QG+L L F EHC++GK+ R F K + T+KGIL+YVHSDLWGP
Subjt: KINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPAST
Query: NSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIME
S+ GSRYF+S IDDFSRK W+Y LK KD+AF KF EWK +E QT R VK LRTDNGLE+ N F+ FCK+ G+ RH TV +TPQQNG+AER NRTIME
Subjt: NSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIME
Query: RVRCQLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
R RC LT+A L ++W EAA Y +NR T++N T
Subjt: RVRCQLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
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| A0A5D3DNU1 Putative gag-pol polyprotein | 4.3e-151 | 45.54 | Show/hide |
Query: IEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERF
+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE K ++ AY T++L LS+ VLR V + T ++W KL +LY TK NK+Y++E+F
Subjt: IEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERF
Query: FTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKES----SEGFFVKGKR
F +KMD +KSL ENLDEF+++ + N+GEK+SDEN+A +LLNSLP+ Y+EVK +KYGR+++T +++ A++T+ LEI+ ++K+ + G K
Subjt: FTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKES----SEGFFVKGKR
Query: KGKDNKHQPDEKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSIT--YSDALATSDQCSNDQSSFEKHD------------WVI
KGK+ + K K++ +C CHKEGH K++C NK +EA+ E ++T Y+ A T D + ++ +E + W++
Subjt: KGKDNKHQPDEKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSIT--YSDALATSDQCSNDQSSFEKHD------------WVI
Query: DSGCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGV
DSGC+FHMT + + + + + DG V +G+N TC V G SV + DG V++L NVR+VP LKRNLISLG LD GCT +G++++ + + L G
Subjt: DSGCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGV
Query: KINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPAST
+GLYV++ + SA + S S LWHKRL+H+ E+GLQ L++QG+L L F EHC++GK+ R F K + T+KGIL+YVHSDLWGP
Subjt: KINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPAST
Query: NSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIME
S+ GSRYF+S IDDFSRK W+Y LK KD+AF KF EWK +E QT R VK LRTDNGLE+ N F+ FCK+ G+ RH TV +TPQQNG+AER NRTIME
Subjt: NSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIME
Query: RVRCQLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
R RC LT+A L ++W EAA Y +NR T++N T
Subjt: RVRCQLTDAILVERYWAEAASYTVYTLNRCTHTSINFLT
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| A0A5N6MMT4 Integrase catalytic domain-containing protein | 6.8e-133 | 42.22 | Show/hide |
Query: KANIEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMR
K +IEKF+GK DF LW+ K++A+L + + AL LP L++ K+ + A+ +IL+L + VLR+V E T +WTKL +LY TK N++Y++
Subjt: KANIEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMR
Query: ERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKK-ESSEGFFVKGKR
+R +TF+M + KSL ++ DEF ++ + +N+ ++ +E+ A + L+SLP Y+ TL +GRE+++ E +++A+ ++EL+ + K E S+G FV+G+
Subjt: ERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKK-ESSEGFFVKGKR
Query: KGKDNKHQPD--EKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEA-AVGENSITYSDALATSDQCSNDQSSFEKHDWVIDSGCSFHMTHF
+ +D K + KSK K+RC C+ + HLKR C K+K + + K K Q + + E S+ D+ D + S +WV+DSGCSFHMT
Subjt: KGKDNKHQPD--EKSKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEA-AVGENSITYSDALATSDQCSNDQSSFEKHDWVIDSGCSFHMTHF
Query: KGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGVKINGLYVVKDI
K +F D V++G+N C+V G+ +VS KL +GS+ L+ VR++P LKRNLISLGM +S G G +++ + +VL+G + N D
Subjt: KGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGVKINGLYVVKDI
Query: EMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNSLSGSRYFLS
E+ ++ V+E G S++ LWH R+ HI GLQ L +QG+L GF EHCV+GKA R F +S +KGIL+Y+H+DLWGP+ SL G+RYFLS
Subjt: EMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNSLSGSRYFLS
Query: FIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRCQLTDAIL
+D +SR+ WV+ LKSKD+ F KFKEWK M+E QT R VK LRTDNGLE+CN+ FD FCK G+ RH +V TPQQNG+ ER+N T++ +VRC L +A L
Subjt: FIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRCQLTDAIL
Query: VERYWAEAASYTVYTLNRCTHTS
+++WAEA S V+ +N C+ +S
Subjt: VERYWAEAASYTVYTLNRCTHTS
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.1e-50 | 28.16 | Show/hide |
Query: DLWKANIEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKM
D K NI+ FDG+ + +WK +I+A+L ++ L+ + +P + + K+ A T+I LS+S L + T +I L+ +YE K +++
Subjt: DLWKANIEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKM
Query: YMRERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLK-YGRENITTEVIISAIRTKELEIQSQKKESSE-----
+R+R + K+ S SL + F + SE G KI + ++ LL +LP Y + T ++ EN+T + + + +E++I++ ++S+
Subjt: YMRERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLK-YGRENITTEVIISAIRTKELEIQSQKKESSE-----
Query: ------GFFVKGKRKGKDNKHQPDEK--SKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSITYSDALATSDQCSNDQSSFEKHDW
+ K + K + K SK KV+C++C +EGH+K+DC+ KR N KNK E V S +A + N+ S + +
Subjt: ------GFFVKGKRKGKDNKHQPDEK--SKAKVRCNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSITYSDALATSDQCSNDQSSFEKHDW
Query: VIDSGCSFHMTHFKGWFS----------IYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIE
V+DSG S H+ + + ++ I GE +Y R+ ++L+ +V NL+S+ L G + IE
Subjt: VIDSGCSFHMTHFKGWFS----------IYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIE
Query: IKRDLKIVLSGVKI--NGLYVVKDIEMLKSALVV-----SENGPSESD--LWHKRLSHIGEKGLQVLARQGILPKEA-----GNTLGFYEHCVIGKAKRQ
+ SGV I NGL VVK+ ML + V+ S N +++ LWH+R HI + L + R+ + ++ + E C+ GK R
Subjt: IKRDLKIVLSGVKI--NGLYVVKDIEMLKSALVV-----SENGPSESD--LWHKRLSHIGEKGLQVLARQGILPKEA-----GNTLGFYEHCVIGKAKRQ
Query: CF--TKSQQTSKGILEYVHSDLWGPASTNSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKT
F K + K L VHSD+ GP + +L YF+ F+D F+ Y +K K F F+++ E N V L DNG EY + FC
Subjt: CF--TKSQQTSKGILEYVHSDLWGPASTNSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKT
Query: CGMVRHMTVRHTPQQNGVAERLNRTIMERVRCQLTDAILVERYWAEAASYTVYTLNR
G+ H+TV HTPQ NGV+ER+ RTI E+ R ++ A L + +W EA Y +NR
Subjt: CGMVRHMTVRHTPQQNGVAERLNRTIMERVRCQLTDAILVERYWAEAASYTVYTLNR
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-94 | 33.07 | Show/hide |
Query: KANIEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMR
K + KF+G F W+ +++ +L Q+ + L SK P T+ E ++ A + L+LS+ V+ + DE+T IWT+L +LY +K NK+Y++
Subjt: KANIEKFDGKGDFDLWKAKIKAILGQKKALQALTDPSKLPTTLTEEHKETINTTAYGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMR
Query: ERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKESSEGFFVKGKRK
++ + M + +L+ F + ++ N+G KI +E++A +LLNSLP +Y + TT+ +G+ I + + SA+ E + +KK ++G + + +
Subjt: ERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEVKTTLKYGRENITTEVIISAIRTKELEIQSQKKESSEGFFVKGKRK
Query: GKDNKHQPD------------EKSKAKVR-CNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSITYSDALATSDQCSNDQSSFEKHDWVIDS
G+ + + +SK++VR C C++ GH KRDC + RK + + +KN AA+ +N+ + ++C + S + +WV+D+
Subjt: GKDNKHQPD------------EKSKAKVR-CNYCHKEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSITYSDALATSDQCSNDQSSFEKHDWVIDS
Query: GCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGVKI
S H T + F Y D V MGN + ++ GI + +K G +L++VRHVP+L+ NLIS LD G ++ + + ++ GV
Subjt: GCSFHMTHFKGWFSIYCEWDGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGVKI
Query: NGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNS
LY + E+ + L +++ S DLWHKR+ H+ EKGLQ+LA++ ++ G T+ ++C+ GK R F S + IL+ V+SD+ GP S
Subjt: NGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNS
Query: LSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERV
+ G++YF++FIDD SRK WVY LK+KDQ F+ F+++ ++E++T R +K LR+DNG EY + F+ +C + G+ TV TPQ NGVAER+NRTI+E+V
Subjt: LSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERV
Query: RCQLTDAILVERYWAEAASYTVYTLNRCTHTSINF
R L A L + +W EA Y +NR + F
Subjt: RCQLTDAILVERYWAEAASYTVYTLNRCTHTSINF
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| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 2.7e-17 | 26.53 | Show/hide |
Query: VRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGVKINGLYVVKDIEMLKSAL-VVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKE
V H PN+ +L+SL L ++ T + ++E + D ++ VK Y V +L S + V + N S+ K + L Q I
Subjt: VRHVPNLKRNLISLGMLDSIGCTYGGSSGMIEIKRDLKIVLSGVKINGLYVVKDIEMLKSAL-VVSENGPSESDLWHKRLSHIGEKGLQVLARQGILPKE
Query: AGNTLGFYEH---------------CVIGKAKRQCFTKSQ----QTSKGILEYVHSDLWGPASTNSLSGSRYFLSFIDDFSRKSWVYFL--KSKDQAFEK
NT+ ++ C+IGK+ + K Q S +Y+H+D++GP S YF+SF D+ ++ WVY L + +D +
Subjt: AGNTLGFYEH---------------CVIGKAKRQCFTKSQ----QTSKGILEYVHSDLWGPASTNSLSGSRYFLSFIDDFSRKSWVYFL--KSKDQAFEK
Query: FKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRCQLTDAILVERYWAEAASYTVYTLN
F I+ Q SV ++ D G EY N F + G+ T + +GVAERLNRT+++ R QL + L W A ++ N
Subjt: FKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRCQLTDAILVERYWAEAASYTVYTLN
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-25 | 23.28 | Show/hide |
Query: YGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEV
Y ++ +S SV V T +IW L +Y + +R + + TK++ + + + +G+ + + + +L +LP+ YK V
Subjt: YGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGEKISDENEAFVLLNSLPDAYKEV
Query: ----------KTTLKYGRENITTEVIISAIRTKEL-----EIQSQKKESSEGFFVKGKRKGK-DNK----------------HQPDEKSKAKV-RCNYCH
T + + E I A+ + + S + ++ G R + DN+ H + +SK + +C C
Subjt: ----------KTTLKYGRENITTEVIISAIRTKEL-----EIQSQKKESSEGFFVKGKRKGK-DNK----------------HQPDEKSKAKV-RCNYCH
Query: KEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSITYSDALATSDQCSNDQSSFEKHDWVIDSGCSFHMTHFKGWFSIYCEW-DGEIVYMGNNNTCRV
+GH S KR +Q Q Q+ LA S + ++W++DSG + H+T S++ + G+ V + + +T +
Subjt: KEGHLKRDCYSLKRKNQNQQRFKKNKPQEAAVGENSITYSDALATSDQCSNDQSSFEKHDWVIDSGCSFHMTHFKGWFSIYCEW-DGEIVYMGNNNTCRV
Query: IGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGML---DSIGCTYGGSSGMIEIKRDLKIVLSGVKINGLYVVKDIEMLKSALVVSENGPSESDLWHK
S SL K + L N+ +VPN+ +NLIS+ L + + + +S ++ +L G + LY +L S + + WH
Subjt: IGIRSVSLKLKDGSVKLLRNVRHVPNLKRNLISLGML---DSIGCTYGGSSGMIEIKRDLKIVLSGVKINGLYVVKDIEMLKSALVVSENGPSESDLWHK
Query: RLSHIGEKGL-QVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAF
RL H L V++ + + C+I K+ + F++S S LEY++SD+W + S RY++ F+D F+R +W+Y LK K Q
Subjt: RLSHIGEKGL-QVLARQGILPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAF
Query: EKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRCQLTDAILVERYWAEAASYTVYTLNR
E F +K ++E + + +DNG E+ AL++ F + G+ + HTP+ NG++ER +R I+E L+ A + + YW A + VY +NR
Subjt: EKFKEWKTMIEKQTNRSVKCLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRCQLTDAILVERYWAEAASYTVYTLNR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.0e-25 | 23.01 | Show/hide |
Query: YGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGE---KISDENEAFVLLNSLPDAY
Y ++ +S SV V T +IW L +Y + +R F + D L + +D +++ +N+ + + D+ A SL + +
Subjt: YGTLILNLSNSVLRQVFDEETPLKIWTKLNTLYETKDAHNKMYMRERFFTFKMDSTKSLSENLDEFKRMTSEFKNMGE---KISDENEAFVLLNSLPDAY
Query: KE-VKTTLKYGRENITTEVIISAIRTKELEIQSQKKESSEGFFVK-GKRKGKDNKHQPDEKSKAK---------VRCNYCHKEGHLKRDCYSLKRKNQNQ
+ + K N V I+A + + +++ G + N QP RC C +GH + C L
Subjt: KE-VKTTLKYGRENITTEVIISAIRTKELEIQSQKKESSEGFFVK-GKRKGKDNKHQPDEKSKAK---------VRCNYCHKEGHLKRDCYSLKRKNQNQ
Query: QRFKKNKPQEAAVGENSITYSDALATSDQCSNDQSSFEKHDWVIDSGCSFHMTHFKGWFSIYCEW-DGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLR
+F+ Q+ +++ ++ ++ N S + ++W++DSG + H+T S + + G+ V + + +T + S SL S+ L
Subjt: QRFKKNKPQEAAVGENSITYSDALATSDQCSNDQSSFEKHDWVIDSGCSFHMTHFKGWFSIYCEW-DGEIVYMGNNNTCRVIGIRSVSLKLKDGSVKLLR
Query: NVRHVPNLKRNLISLGML---DSIGCTYGGSSGMIEIKRDLKIVLSGVKINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGL-QVLARQGI
V +VPN+ +NLIS+ L + + + +S ++ +L G + LY ++ S + WH RL H L V++ +
Subjt: NVRHVPNLKRNLISLGML---DSIGCTYGGSSGMIEIKRDLKIVLSGVKINGLYVVKDIEMLKSALVVSENGPSESDLWHKRLSHIGEKGL-QVLARQGI
Query: LPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVK
+ L C I K+ + F+ S TS LEY++SD+W + S+ RY++ F+D F+R +W+Y LK K Q + F +K+++E + +
Subjt: LPKEAGNTLGFYEHCVIGKAKRQCFTKSQQTSKGILEYVHSDLWGPASTNSLSGSRYFLSFIDDFSRKSWVYFLKSKDQAFEKFKEWKTMIEKQTNRSVK
Query: CLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRCQLTDAILVERYWAEAASYTVYTLNR
L +DNG E+ + + G+ + HTP+ NG++ER +R I+E L+ A + + YW A S VY +NR
Subjt: CLRTDNGLEYCNALFDSFCKTCGMVRHMTVRHTPQQNGVAERLNRTIMERVRCQLTDAILVERYWAEAASYTVYTLNR
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