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Lag0027566 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027566
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncystinosin homolog
Genome locationchr8:2089392..2092025
RNA-Seq ExpressionLag0027566
SyntenyLag0027566
Gene Ontology termsGO:0015811 - L-cystine transport (biological process)
GO:0005774 - vacuolar membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015184 - L-cystine transmembrane transporter activity (molecular function)
InterPro domainsIPR005282 - Lysosomal cystine transporter
IPR006603 - PQ-loop repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038884230.1 cystinosin homolog isoform X1 [Benincasa hispida]1.4e-3961.84Show/hide
Query:  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSI
        F F   +++ ++   I        +S+G     G  R     ++D+I ++      RG+QKVSKT+IAIF AVWFFAAACFF+ALP HSWLWLVS+FNSI
Subjt:  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSI

Query:  QVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG
        QVFMTFIKYS QAFLNFTRKSTVGFSIGNIVLDFTG V TL QM VQSIDQG
Subjt:  QVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG

XP_038884253.1 cystinosin homolog isoform X2 [Benincasa hispida]1.4e-3961.84Show/hide
Query:  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSI
        F F   +++ ++   I        +S+G     G  R     ++D+I ++      RG+QKVSKT+IAIF AVWFFAAACFF+ALP HSWLWLVS+FNSI
Subjt:  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSI

Query:  QVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG
        QVFMTFIKYS QAFLNFTRKSTVGFSIGNIVLDFTG V TL QM VQSIDQG
Subjt:  QVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG

XP_038884276.1 cystinosin homolog isoform X5 [Benincasa hispida]1.4e-3961.84Show/hide
Query:  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSI
        F F   +++ ++   I        +S+G     G  R     ++D+I ++      RG+QKVSKT+IAIF AVWFFAAACFF+ALP HSWLWLVS+FNSI
Subjt:  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSI

Query:  QVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG
        QVFMTFIKYS QAFLNFTRKSTVGFSIGNIVLDFTG V TL QM VQSIDQG
Subjt:  QVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG

XP_038884284.1 cystinosin homolog isoform X6 [Benincasa hispida]1.4e-3961.84Show/hide
Query:  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSI
        F F   +++ ++   I        +S+G     G  R     ++D+I ++      RG+QKVSKT+IAIF AVWFFAAACFF+ALP HSWLWLVS+FNSI
Subjt:  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSI

Query:  QVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG
        QVFMTFIKYS QAFLNFTRKSTVGFSIGNIVLDFTG V TL QM VQSIDQG
Subjt:  QVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG

XP_038884308.1 cystinosin homolog isoform X9 [Benincasa hispida]1.4e-3961.84Show/hide
Query:  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSI
        F F   +++ ++   I        +S+G     G  R     ++D+I ++      RG+QKVSKT+IAIF AVWFFAAACFF+ALP HSWLWLVS+FNSI
Subjt:  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSI

Query:  QVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG
        QVFMTFIKYS QAFLNFTRKSTVGFSIGNIVLDFTG V TL QM VQSIDQG
Subjt:  QVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG

TrEMBL top hitse value%identityAlignment
A0A0A0LB92 Uncharacterized protein1.5e-3684.38Show/hide
Query:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG
        RG QKVSK +IAI  AVWFFA ACFF+ALP HSWLWLVS+FNSIQVFMTFIKYS QAFLNFTRKSTVGFSIGNIVLDF+G VATL QM VQS+DQG
Subjt:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG

A0A1S4DY01 cystinosin homolog isoform X21.3e-3583.33Show/hide
Query:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG
        RG QKVSK  IAI  AVWFFA ACFF+ALP HSWLWLVS+FNSIQVFMT IKYS QAFLNFTRKSTVGFSIGNIVLDF+G VATL QM VQS+DQG
Subjt:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG

A0A1S4DYQ8 cystinosin homolog isoform X11.3e-3583.33Show/hide
Query:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG
        RG QKVSK  IAI  AVWFFA ACFF+ALP HSWLWLVS+FNSIQVFMT IKYS QAFLNFTRKSTVGFSIGNIVLDF+G VATL QM VQS+DQG
Subjt:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG

A0A6J1DN06 cystinosin homolog4.3e-3967.42Show/hide
Query:  KYSYGQDDTGGFERCVFP---LALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRK
        KY Y Q         +FP   L L F+   +++ + RG+QK+SK  IAIFA VWFFAAACFFIALP HSWLWLVS+FN+IQVFMT IKYS QAF+NFTRK
Subjt:  KYSYGQDDTGGFERCVFP---LALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRK

Query:  STVGFSIGNIVLDFTGVVATLTQMRVQSIDQG
        STVGFSIGN+VLDFTG VA+L QM VQSIDQG
Subjt:  STVGFSIGNIVLDFTGVVATLTQMRVQSIDQG

A0A6J1EJ63 cystinosin homolog2.2e-3553.85Show/hide
Query:  LEFSSRLRNFEFDETIIMF----MIQCVIARMHCLKKYSYGQDDTGGFERCVFP----LALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFI
        L F   + NF    + +++         + R +  +KY + Q          FP    L +  + ++     C GDQKVS + +AIFAAVW FAAACFFI
Subjt:  LEFSSRLRNFEFDETIIMF----MIQCVIARMHCLKKYSYGQDDTGGFERCVFP----LALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFI

Query:  ALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG
        ALP HSWLWLVSMFNSIQV MT IKYS QAFLNFTRKST+GFSI  +VLDF G VATLTQM VQSIDQG
Subjt:  ALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG

SwissProt top hitse value%identityAlignment
A7MB63 Cystinosin2.4e-1041.94Show/hide
Query:  RGDQKVSKTTIAIFAAVWFFA-AACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQS
        RG Q+VS   I+     W F   A    A+   +WL  +  F+ I++ +T +KY  QA++NF  KST G+SIGN++LDFTG   +L QM +QS
Subjt:  RGDQKVSKTTIAIFAAVWFFA-AACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQS

O60931 Cystinosin1.1e-1041.94Show/hide
Query:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPN-HSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQS
        RG Q+VS   I      W FA     +A     +WL  +  F+ I++ +T +KY  QA++NF  KST G+SIGN++LDFTG   +L QM +QS
Subjt:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPN-HSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQS

P57757 Cystinosin2.4e-1040.86Show/hide
Query:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPN-HSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQS
        RG+Q+VS  +I      W F      +A     +WL  +  F+ I++ +T IKY  QA++NF  KST G+SIG ++LDFTG   +L QM +QS
Subjt:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPN-HSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQS

P57758 Cystinosin homolog2.1e-3070.53Show/hide
Query:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQ
        RG QKVS+  I I   VW FAA CFFIALP HSWLWL+S+FNSIQVFMT +KY  QA +NFTRKSTVG+SIGNI+LDFTG +A   QM +QSIDQ
Subjt:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQ

Q54WT7 Cystinosin homolog6.0e-1440.82Show/hide
Query:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPN-HSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQGH
        RG+QK SK  I I   +W        +   N  +WLW+++ ++ +++F+TFIKY  QA+LNF  KST G+S+ N++LDF+G V +L QM +   D G+
Subjt:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPN-HSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQGH

Arabidopsis top hitse value%identityAlignment
AT5G40670.1 PQ-loop repeat family protein / transmembrane family protein1.5e-3170.53Show/hide
Query:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQ
        RG QKVS+  I I   VW FAA CFFIALP HSWLWL+S+FNSIQVFMT +KY  QA +NFTRKSTVG+SIGNI+LDFTG +A   QM +QSIDQ
Subjt:  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATCTCAAACTCACCATGGGAAGGAAATAGGAAAATTGCTTCGAACGTGCAACGAACAATGGTTTCTTCTCTCCTCACCATTGTTTTAGAATTCAGCTCTCGGTT
ACGTAATTTTGAGTTTGACGAGACAATCATCATGTTTATGATACAATGTGTCATTGCTCGGATGCATTGCTTGAAGAAATATAGCTACGGACAAGATGATACCGGTGGCT
TTGAGCGATGTGTTTTTCCCCTTGCACTCGATTTTATTGATCTTCGTCGTCTCAGTTCAAATTGTCGTGGCGACCAGAAGGTCTCAAAGACGACCATCGCCATCTTTGCT
GCAGTATGGTTTTTTGCAGCAGCTTGCTTTTTTATAGCTCTGCCAAACCATTCATGGCTTTGGCTCGTCTCCATGTTCAATTCAATTCAAGTTTTTATGACATTCATCAA
ATACTCTTCTCAGGCATTTTTGAACTTTACCCGAAAGAGCACAGTGGGATTCAGCATTGGCAATATAGTTCTGGACTTCACTGGAGTAGTGGCAACTTTGACTCAAATGA
GGGTGCAGTCAATTGACCAAGGTCATCCACTAGCTCAATTAAGCTTGAATGAAGCTCCGGTGTCAACTCCAACTGAATCCAATCATGAGGAGATCATTATGCCACAAGCT
TCAATGACAAGAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGATCTCAAACTCACCATGGGAAGGAAATAGGAAAATTGCTTCGAACGTGCAACGAACAATGGTTTCTTCTCTCCTCACCATTGTTTTAGAATTCAGCTCTCGGTT
ACGTAATTTTGAGTTTGACGAGACAATCATCATGTTTATGATACAATGTGTCATTGCTCGGATGCATTGCTTGAAGAAATATAGCTACGGACAAGATGATACCGGTGGCT
TTGAGCGATGTGTTTTTCCCCTTGCACTCGATTTTATTGATCTTCGTCGTCTCAGTTCAAATTGTCGTGGCGACCAGAAGGTCTCAAAGACGACCATCGCCATCTTTGCT
GCAGTATGGTTTTTTGCAGCAGCTTGCTTTTTTATAGCTCTGCCAAACCATTCATGGCTTTGGCTCGTCTCCATGTTCAATTCAATTCAAGTTTTTATGACATTCATCAA
ATACTCTTCTCAGGCATTTTTGAACTTTACCCGAAAGAGCACAGTGGGATTCAGCATTGGCAATATAGTTCTGGACTTCACTGGAGTAGTGGCAACTTTGACTCAAATGA
GGGTGCAGTCAATTGACCAAGGTCATCCACTAGCTCAATTAAGCTTGAATGAAGCTCCGGTGTCAACTCCAACTGAATCCAATCATGAGGAGATCATTATGCCACAAGCT
TCAATGACAAGAATCTAG
Protein sequenceShow/hide protein sequence
MVISNSPWEGNRKIASNVQRTMVSSLLTIVLEFSSRLRNFEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQKVSKTTIAIFA
AVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQGHPLAQLSLNEAPVSTPTESNHEEIIMPQA
SMTRI