; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027578 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027578
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRas-related protein Rab-2A
Genome locationchr8:2181947..2185704
RNA-Seq ExpressionLag0027578
SyntenyLag0027578
Gene Ontology termsGO:0030100 - regulation of endocytosis (biological process)
GO:0005768 - endosome (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145694.1 ras-related protein RABB1b [Cucumis sativus]1.3e-11398.58Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHANPNMSIMLVGNK+DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSNESSGIKVGYGRPQGPSGARD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCCG
        GTVAQRGGCCG
Subjt:  GTVAQRGGCCG

XP_008450002.1 PREDICTED: ras-related protein RABB1b [Cucumis melo]1.0e-11398.58Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHANPNMSIMLVGNK+DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSNESSGIKVGYGRPQGPSGARD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCCG
        G VAQRGGCCG
Subjt:  GTVAQRGGCCG

XP_022989237.1 ras-related protein RABB1b [Cucurbita maxima]1.3e-11398.57Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHANPNMSIMLVGNK+DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSNESSGIKVGYGRPQGPSGARD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCC
        GTVAQRGGCC
Subjt:  GTVAQRGGCC

XP_023912425.1 ras-related protein RABB1b [Quercus suber]3.0e-11398.1Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHANPNMSIML+GNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSNESSGIKVGYGRPQGPSGARD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCCG
        G VAQRGGCCG
Subjt:  GTVAQRGGCCG

XP_038894253.1 ras-related protein RABB1b [Benincasa hispida]2.7e-11499.05Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHANPNMSIMLVGNK+DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSNESSGIKVGYGRPQGPSGARD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCCG
        GTVAQRGGCCG
Subjt:  GTVAQRGGCCG

TrEMBL top hitse value%identityAlignment
A0A0A0LC04 Uncharacterized protein6.5e-11498.58Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHANPNMSIMLVGNK+DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSNESSGIKVGYGRPQGPSGARD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCCG
        GTVAQRGGCCG
Subjt:  GTVAQRGGCCG

A0A1S3BMP4 ras-related protein RABB1b5.0e-11498.58Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHANPNMSIMLVGNK+DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSNESSGIKVGYGRPQGPSGARD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCCG
        G VAQRGGCCG
Subjt:  GTVAQRGGCCG

A0A5A7T4U5 Ras-related protein RABB1b5.0e-11498.58Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHANPNMSIMLVGNK+DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSNESSGIKVGYGRPQGPSGARD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCCG
        G VAQRGGCCG
Subjt:  GTVAQRGGCCG

A0A6A1VG46 Ras-related protein RABB1b1.4e-11397.63Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHANPNM+IML+GNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFI+TAAKILQNIQ+GVFDVSNESSGIKVGYGRPQGPSGARD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCCG
        G VAQRGGCCG
Subjt:  GTVAQRGGCCG

A0A6J1JF93 ras-related protein RABB1b6.5e-11498.57Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHANPNMSIMLVGNK+DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSNESSGIKVGYGRPQGPSGARD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCC
        GTVAQRGGCC
Subjt:  GTVAQRGGCC

SwissProt top hitse value%identityAlignment
P36863 GTP-binding protein yptV41.4e-9481.69Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQ-GPSGAR
        LEDARQHANPNM+IML+GNK DL HRRAV+ EEGEQFAKE+GL+FLE SARTA NVEEAFI TA +I + IQDGVFDVSNES GIKVGYG    GP  A+
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQ-GPSGAR

Query:  --DGTVAQRGGCC
          +G   +   CC
Subjt:  --DGTVAQRGGCC

P49103 Ras-related protein Rab-2-A5.3e-9784.76Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHAN NM+IMLVGNK DL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA  I + IQDGVFDVSNES GIKVGY  P    GA  
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCC
        G+ +Q GGCC
Subjt:  GTVAQRGGCC

P49104 Ras-related protein Rab-2-B1.1e-9784.76Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHAN NM+IMLVGNK DL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA  I + IQDGVFDVSNES GIKVGY  P G SG   
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCC
         + +Q GGCC
Subjt:  GTVAQRGGCC

P92963 Ras-related protein RABB1c1.7e-10387.68Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHAN NM+IML+GNK DLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQDGVFDVSNES GIKVGYG   GPSG RD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCCG
        G+ +Q GGCCG
Subjt:  GTVAQRGGCCG

Q38922 Ras-related protein RABB1b2.2e-11192.89Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHANPNMSIML+GNK DLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAKILQNIQDGVFDVSNESSGIK+GYGR QG +G RD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCCG
        GT++Q GGCCG
Subjt:  GTVAQRGGCCG

Arabidopsis top hitse value%identityAlignment
AT4G17160.1 RAB GTPase homolog B1A1.5e-8372.17Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY Y FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ +TID +PIKLQIWDTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LE+ARQHA+ NM+ ML+GNK DL  +R VS EEGEQFA+E+GL+F+EASA+TA NVEEAF++TAA I + IQDGV D +NE        G   GP G +D
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVA-QRGGCCG
         + + QR GCCG
Subjt:  GTVA-QRGGCCG

AT4G17170.1 RAB GTPase homolog B1C1.2e-10487.68Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHAN NM+IML+GNK DLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQDGVFDVSNES GIKVGYG   GPSG RD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCCG
        G+ +Q GGCCG
Subjt:  GTVAQRGGCCG

AT4G35860.1 GTP-binding 21.6e-11292.89Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD
        LEDARQHANPNMSIML+GNK DLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAKILQNIQDGVFDVSNESSGIK+GYGR QG +G RD
Subjt:  LEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARD

Query:  GTVAQRGGCCG
        GT++Q GGCCG
Subjt:  GTVAQRGGCCG

AT4G35860.2 GTP-binding 22.0e-8390.91Show/hide
Query:  MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFL
        MVT+DGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIML+GNK DLAH+RAVSKEEG+QFAKE+GLLFL
Subjt:  MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFL

Query:  EASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARDGTVAQRGGCCG
        EASARTAQNVEEAFI+TAAKILQNIQDGVFDVSNESSGIK+GYGR QG +G RDGT++Q GGCCG
Subjt:  EASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARDGTVAQRGGCCG

AT5G45750.1 RAB GTPase homolog A1C7.7e-5146.95Show/hide
Query:  YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLE
        YDYLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +D + IK QIWDTAGQE +R+IT +YYRGA GALLVYD+TR  TF ++ +WL+
Subjt:  YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLE

Query:  DARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESS-----GIKVGYGRPQGPSG
        + R H +PN+ +MLVGNKSDL H  AV  E+ + FA++  L F+E SA  A NVE AF +   +I   +     + ++ES+     G K+  G       
Subjt:  DARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESS-----GIKVGYGRPQGPSG

Query:  ARDGTVAQRGGCC
         +D +  ++GGCC
Subjt:  ARDGTVAQRGGCC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTACGATTACCTCTTCAAGTACATCATCATCGGCGATACAGGCGTGGGGAAATCTTGCTTGTTGTTGCAGTTCACGGACAAGAGGTTTCAGCCTGTGCACGATCT
CACTATCGGCGTTGAGTTTGGTGCTCGCATGGTCACCATTGATGGCCGACCCATTAAGCTTCAGATATGGGATACTGCTGGGCAAGAATCATTCAGATCAATTACAAGAT
CTTACTATAGAGGAGCAGCCGGTGCTCTTTTAGTTTATGACATTACCAGGAGGGAGACATTCAATCACTTGGCAAGCTGGTTGGAGGATGCTCGGCAGCATGCAAATCCC
AACATGTCAATTATGCTTGTAGGGAACAAGTCAGATCTCGCTCATCGAAGAGCTGTAAGCAAGGAAGAGGGAGAGCAATTTGCAAAAGAAAATGGACTCTTATTTTTAGA
GGCATCTGCTAGAACAGCTCAAAATGTGGAAGAGGCATTTATAAAGACAGCCGCTAAAATACTTCAAAATATTCAAGACGGTGTCTTTGATGTATCAAATGAGTCATCTG
GTATCAAGGTCGGTTACGGGCGGCCTCAAGGACCATCAGGTGCAAGAGATGGAACAGTTGCACAAAGAGGTGGATGCTGTGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTACGATTACCTCTTCAAGTACATCATCATCGGCGATACAGGCGTGGGGAAATCTTGCTTGTTGTTGCAGTTCACGGACAAGAGGTTTCAGCCTGTGCACGATCT
CACTATCGGCGTTGAGTTTGGTGCTCGCATGGTCACCATTGATGGCCGACCCATTAAGCTTCAGATATGGGATACTGCTGGGCAAGAATCATTCAGATCAATTACAAGAT
CTTACTATAGAGGAGCAGCCGGTGCTCTTTTAGTTTATGACATTACCAGGAGGGAGACATTCAATCACTTGGCAAGCTGGTTGGAGGATGCTCGGCAGCATGCAAATCCC
AACATGTCAATTATGCTTGTAGGGAACAAGTCAGATCTCGCTCATCGAAGAGCTGTAAGCAAGGAAGAGGGAGAGCAATTTGCAAAAGAAAATGGACTCTTATTTTTAGA
GGCATCTGCTAGAACAGCTCAAAATGTGGAAGAGGCATTTATAAAGACAGCCGCTAAAATACTTCAAAATATTCAAGACGGTGTCTTTGATGTATCAAATGAGTCATCTG
GTATCAAGGTCGGTTACGGGCGGCCTCAAGGACCATCAGGTGCAAGAGATGGAACAGTTGCACAAAGAGGTGGATGCTGTGGCTAA
Protein sequenceShow/hide protein sequence
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANP
NMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARDGTVAQRGGCCG