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Lag0027593 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027593
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:2327548..2328638
RNA-Seq ExpressionLag0027593
SyntenyLag0027593
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040304.1 uncharacterized protein E6C27_scaffold460G00040 [Cucumis melo var. makuwa]9.8e-1163.33Show/hide
Query:  VSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
        +S     GK   +R VE+EEQMLYL EVPDS+RFLESRL+EI  +TD IDAVAG V+G+P
Subjt:  VSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
KAA0046219.1 uncharacterized protein E6C27_scaffold284G00070 [Cucumis melo var. makuwa]7.5e-1171.7Show/hide
Query:  GKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
        GK   +R VE+EEQMLYL +VPDS+RFLESRLEEIA +TD IDAVAG V+G+P
Subjt:  GKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
KAA0060138.1 uncharacterized protein E6C27_scaffold39G00590 [Cucumis melo var. makuwa]5.7e-1160Show/hide
Query:  VSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
        +S     GK   +R VE++EQMLYL EVPDS+R+LESRL+EI+ +TD ID VAGCV+G+P
Subjt:  VSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
TYK02461.1 uncharacterized protein E5676_scaffold1738G00820 [Cucumis melo var. makuwa]1.5e-1163.33Show/hide
Query:  VSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
        +S     GKT  +R VE+EEQMLYL EVPDS+ +LESRL+EI+ +TD IDAVAGCV+G+P
Subjt:  VSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
TYK18977.1 uncharacterized protein E5676_scaffold418G00720 [Cucumis melo var. makuwa]7.5e-1171.7Show/hide
Query:  GKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
        GK   +R VE+EEQMLYL +VPDS+RFLESRLEEIA +TD IDAVAG V+G+P
Subjt:  GKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
TrEMBL top hitse value%identityAlignment
A0A5A7T9Z3 Uncharacterized protein4.7e-1163.33Show/hide
Query:  VSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
        +S     GK   +R VE+EEQMLYL EVPDS+RFLESRL+EI  +TD IDAVAG V+G+P
Subjt:  VSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
A0A5A7TY91 Retrotrans_gag domain-containing protein3.6e-1171.7Show/hide
Query:  GKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
        GK   +R VE+EEQMLYL +VPDS+RFLESRLEEIA +TD IDAVAG V+G+P
Subjt:  GKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
A0A5A7UY20 Retrotrans_gag domain-containing protein2.8e-1160Show/hide
Query:  VSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
        +S     GK   +R VE++EQMLYL EVPDS+R+LESRL+EI+ +TD ID VAGCV+G+P
Subjt:  VSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
A0A5D3BRU5 Uncharacterized protein7.3e-1263.33Show/hide
Query:  VSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
        +S     GKT  +R VE+EEQMLYL EVPDS+ +LESRL+EI+ +TD IDAVAGCV+G+P
Subjt:  VSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
A0A5D3D5Z0 Retrotrans_gag domain-containing protein3.6e-1171.7Show/hide
Query:  GKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
        GK   +R VE+EEQMLYL +VPDS+RFLESRLEEIA +TD IDAVAG V+G+P
Subjt:  GKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGATCAAGCCATCGCTCTCTGGAATTGTAATTCAAACGGGGGTAGAGGTTGCGATATTCGCCCGTTGTGCCACCGGCGATCCGTTTTCAAGTTGGCTGACTTACT
TGTGAGCGAAATAAAACAGTTGGGCAAGACCCATGTGGAACGATTTGTAGAGATCGAAGAGCAGATGCTCTACCTGAGGGAAGTCCCCGATTCGGTTCGCTTCCTAGAAT
CTCGTCTTGAAGAGATTGCGACGAGGACAGATAAGATCGATGCGGTAGCTGGCTGCGTGGATGGAATGCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGATCAAGCCATCGCTCTCTGGAATTGTAATTCAAACGGGGGTAGAGGTTGCGATATTCGCCCGTTGTGCCACCGGCGATCCGTTTTCAAGTTGGCTGACTTACT
TGTGAGCGAAATAAAACAGTTGGGCAAGACCCATGTGGAACGATTTGTAGAGATCGAAGAGCAGATGCTCTACCTGAGGGAAGTCCCCGATTCGGTTCGCTTCCTAGAAT
CTCGTCTTGAAGAGATTGCGACGAGGACAGATAAGATCGATGCGGTAGCTGGCTGCGTGGATGGAATGCCCTGA
Protein sequenceShow/hide protein sequence
MGDQAIALWNCNSNGGRGCDIRPLCHRRSVFKLADLLVSEIKQLGKTHVERFVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGCVDGMP