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Lag0027607 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027607
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr8:2451266..2454131
RNA-Seq ExpressionLag0027607
SyntenyLag0027607
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8478534.1 hypothetical protein CXB51_028291 [Gossypium anomalum]2.4e-0450Show/hide
Query:  SLLVSREG-QGETFNPNRGLRQGDPQSSYLFLLCVEGYKWKVGNGKYIDIDQDPWINRER
        S  VS  G  GE F+P+RGLRQGDP S YLFLLCVEG+   +   +   + +   I RER
Subjt:  SLLVSREG-QGETFNPNRGLRQGDPQSSYLFLLCVEGYKWKVGNGKYIDIDQDPWINRER

TrEMBL top hitse value%identityAlignment
A0A1U8JTA0 uncharacterized protein LOC1079099562.0e-0444.29Show/hide
Query:  SLLVSREG-QGETFNPNRGLRQGDPQSSYLFLLCVEGYKWKVGNGKYIDIDQDPWINRER-SVSPLITSN
        S  VS  G   E F+P+RGLRQGDP S YLFL+CVEG+   +   K   + +   + RER S++ L  S+
Subjt:  SLLVSREG-QGETFNPNRGLRQGDPQSSYLFLLCVEGYKWKVGNGKYIDIDQDPWINRER-SVSPLITSN

A0A2N9IZR8 Uncharacterized protein2.6e-0432.23Show/hide
Query:  LLSCKPRLLPSQTNSLLVSREGQGETFNPNRGLRQGDPQSSYLFLLCVE------------GYKWKVGNGKYIDIDQDPWIN----RERSVSPLITSNIL
        ++SC    + + T S+L++ +   E F P+RG+RQGDP S Y+F+LC+E            G  W + NG  I+   D W+     RE+   PL      
Subjt:  LLSCKPRLLPSQTNSLLVSREGQGETFNPNRGLRQGDPQSSYLFLLCVE------------GYKWKVGNGKYIDIDQDPWIN----RERSVSPLITSNIL

Query:  KGLKVKNGIDEKNDWKIELIS
        +  K+ +  D  N+W +E IS
Subjt:  KGLKVKNGIDEKNDWKIELIS

A0A7N2M318 zf-RVT domain-containing protein1.4e-0535.78Show/hide
Query:  PNRGLRQGDPQSSYLFLLC-----------------VEGYKWKVGNGKYIDIDQDPWI---NRERSVSPLITSNILKGLKVKNGIDEKNDWKIELISDKF
        P RGLRQGDP SSYLFLLC                 + GY   +GNGK   I +D W+   N    +S L +  +   ++V   + E   WK +LI   F
Subjt:  PNRGLRQGDPQSSYLFLLC-----------------VEGYKWKVGNGKYIDIDQDPWI---NRERSVSPLITSNILKGLKVKNGIDEKNDWKIELISDKF

Query:  IPKDAKGKL
        +P +A   L
Subjt:  IPKDAKGKL

A0A803NZC3 Uncharacterized protein2.0e-0436Show/hide
Query:  LCVEGYKWKVGNGKYIDIDQDPWINRERSVSPLITSNILKGLKVKNGIDEKNDWKIELISDKFIPKDAKGKLEQS
        L ++G +WKVG+G+ I    DPW+    +  PL+ ++I   LKV + I  +  W I+L++  FIP D +  L +S
Subjt:  LCVEGYKWKVGNGKYIDIDQDPWINRERSVSPLITSNILKGLKVKNGIDEKNDWKIELISDKFIPKDAKGKLEQS

A0A803Q446 Uncharacterized protein6.8e-0530.3Show/hide
Query:  PNRGLRQGDPQSSYLFLLCVE-----------------------GYKWKVGNGKYIDIDQDPWINRERSVSPLITSNILKGLKVKNGIDEKNDWKIELI
        P RGL QG P S YLFL+C E                       G +WK+G G+++    DPWI    ++ P        G+ V N I E+  W + ++
Subjt:  PNRGLRQGDPQSSYLFLLCVE-----------------------GYKWKVGNGKYIDIDQDPWINRERSVSPLITSNILKGLKVKNGIDEKNDWKIELI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTCATCCAAGTTGAAGCCATCTGGTCGAAGATGAGGCCGACCCTATGGTCTTACCACGACAACGCAACACCAGGACACGGTCGAGAGACGGATACCAAAGGAAA
GACAAGGCAAAAAGGTTGGGTCGCTCGACCCAACCCATGTGGGCCATGCTCGGCCTCGACCATTGGCCATGACCGACCACTCAGCCCACTTGTGTGGGTCGAGTCCATCC
GCCTCCGTTTGGCCCCTAGTGCCCCTGGCTGCCTTGGTTCCACCTGGTTCAGCCCGAATCGCCTTCGAAAGCCTAGAAACCCTAGAAATTATCCTCTTACTCTTGTTCTC
TTGCTTCCCATCTTTTTCCTTGCTGACTTAAGCATCGGAGGTAGTGTGGCTAGCACCACACCGGTGTGCAGGTTTCTTCTGTCTTGCAAGCCACGTCTTCTCCCCTCTCA
AACAAATTCACTGCTGGTGTCACGTGAAGGTCAGGGAGAGACCTTCAACCCGAATAGGGGTCTCAGGCAGGGAGATCCCCAATCGTCATACCTATTCCTCCTTTGCGTGG
AAGGCTACAAATGGAAAGTCGGGAATGGAAAGTACATCGACATCGATCAAGACCCGTGGATAAACAGAGAAAGAAGTGTTTCACCCTTAATCACATCTAACATTCTTAAA
GGGCTTAAAGTAAAAAACGGTATAGATGAGAAAAATGATTGGAAGATTGAGTTGATAAGTGACAAATTCATTCCAAAAGATGCAAAGGGCAAATTGGAGCAGTCTAGGCT
ACAGGGAATGGTGAATCTCAAATGCAATGATAGAGGATTTGGAGCTAGAAATTTTAACTCTGTGGAACGTGTGACAATTCATAAATCAAATTCTCATCAACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCATTTCATCCAAGTTGAAGCCATCTGGTCGAAGATGAGGCCGACCCTATGGTCTTACCACGACAACGCAACACCAGGACACGGTCGAGAGACGGATACCAAAGGAAA
GACAAGGCAAAAAGGTTGGGTCGCTCGACCCAACCCATGTGGGCCATGCTCGGCCTCGACCATTGGCCATGACCGACCACTCAGCCCACTTGTGTGGGTCGAGTCCATCC
GCCTCCGTTTGGCCCCTAGTGCCCCTGGCTGCCTTGGTTCCACCTGGTTCAGCCCGAATCGCCTTCGAAAGCCTAGAAACCCTAGAAATTATCCTCTTACTCTTGTTCTC
TTGCTTCCCATCTTTTTCCTTGCTGACTTAAGCATCGGAGGTAGTGTGGCTAGCACCACACCGGTGTGCAGGTTTCTTCTGTCTTGCAAGCCACGTCTTCTCCCCTCTCA
AACAAATTCACTGCTGGTGTCACGTGAAGGTCAGGGAGAGACCTTCAACCCGAATAGGGGTCTCAGGCAGGGAGATCCCCAATCGTCATACCTATTCCTCCTTTGCGTGG
AAGGCTACAAATGGAAAGTCGGGAATGGAAAGTACATCGACATCGATCAAGACCCGTGGATAAACAGAGAAAGAAGTGTTTCACCCTTAATCACATCTAACATTCTTAAA
GGGCTTAAAGTAAAAAACGGTATAGATGAGAAAAATGATTGGAAGATTGAGTTGATAAGTGACAAATTCATTCCAAAAGATGCAAAGGGCAAATTGGAGCAGTCTAGGCT
ACAGGGAATGGTGAATCTCAAATGCAATGATAGAGGATTTGGAGCTAGAAATTTTAACTCTGTGGAACGTGTGACAATTCATAAATCAAATTCTCATCAACAATAG
Protein sequenceShow/hide protein sequence
MHFIQVEAIWSKMRPTLWSYHDNATPGHGRETDTKGKTRQKGWVARPNPCGPCSASTIGHDRPLSPLVWVESIRLRLAPSAPGCLGSTWFSPNRLRKPRNPRNYPLTLVL
LLPIFFLADLSIGGSVASTTPVCRFLLSCKPRLLPSQTNSLLVSREGQGETFNPNRGLRQGDPQSSYLFLLCVEGYKWKVGNGKYIDIDQDPWINRERSVSPLITSNILK
GLKVKNGIDEKNDWKIELISDKFIPKDAKGKLEQSRLQGMVNLKCNDRGFGARNFNSVERVTIHKSNSHQQ