; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027618 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027618
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:2578535..2579601
RNA-Seq ExpressionLag0027618
SyntenyLag0027618
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]9.7e-3641.52Show/hide
Query:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHR--------
        QW  +GD NT FFHR AS  + R FI  LE   G ++ SE EIE EI++F+ NLY+ +    + L+G++W  I      WL+R F E+E+ R        
Subjt:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHR--------

Query:  --------------------EQQIILVS---------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHG
                            ++ ++ V          N   NETFICLI K+K + KV D RPISL TSLYK+++KVLA RL++VL STI+  Q+ FV G
Subjt:  --------------------EQQIILVS---------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHG

Query:  RQILDATLVVSESVEDWKMLKKKG
        RQILDA L+ +E VE+ + L K G
Subjt:  RQILDATLVVSESVEDWKMLKKKG

VVA13439.1 Hypothetical predicted protein, partial [Prunus dulcis]9.7e-3641.52Show/hide
Query:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHR--------
        QW  +GD NT FFHR AS  + R FI  LE   G ++ SE EIE EI++F+ NLY+ +    + L+G++W  I      WL+R F E+E+ R        
Subjt:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHR--------

Query:  --------------------EQQIILVS---------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHG
                            ++ ++ V          N   NETFICLI K+K + KV D RPISL TSLYK+++KVLA RL++VL STI+  Q+ FV G
Subjt:  --------------------EQQIILVS---------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHG

Query:  RQILDATLVVSESVEDWKMLKKKG
        RQILDA L+ +E VE+ + L K G
Subjt:  RQILDATLVVSESVEDWKMLKKKG

VVA21938.1 Hypothetical predicted protein, partial [Prunus dulcis]9.7e-3641.52Show/hide
Query:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHR--------
        QW  +GD NT FFHR AS  + R FI  LE   G ++ SE EIE EI++F+ NLY+ +    + L+G++W  I      WL+R F E+E+ R        
Subjt:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHR--------

Query:  --------------------EQQIILVS---------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHG
                            ++ ++ V          N   NETFICLI K+K + KV D RPISL TSLYK+++KVLA RL++VL STI+  Q+ FV G
Subjt:  --------------------EQQIILVS---------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHG

Query:  RQILDATLVVSESVEDWKMLKKKG
        RQILDA L+ +E VE+ + L K G
Subjt:  RQILDATLVVSESVEDWKMLKKKG

VVA25489.1 Hypothetical predicted protein, partial [Prunus dulcis]2.5e-3947.18Show/hide
Query:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHREQQIILVS
        QW  +GD NT FFHR AS  + R FI  LE   G ++ SE EIE EI++F+ NLY+ +    + L+G++W  I      WL+R F E+E+ R   + +++
Subjt:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHREQQIILVS

Query:  --------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHGRQILDATLVVSESVEDWKMLKKKG
                N   NETFICLI K+K + KV D RPISL TSLYK+++KVLA RL++VL STI+  Q+ FV GRQILDA L+ +E VE+ + L K G
Subjt:  --------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHGRQILDATLVVSESVEDWKMLKKKG

VVA39726.1 Hypothetical predicted protein, partial [Prunus dulcis]2.5e-3947.18Show/hide
Query:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHREQQIILVS
        QW  +GD NT FFHR AS  + R FI  LE   G ++ SE EIE EI++F+ NLY+ +    + L+G++W  I      WL+R F E+E+ R   + +++
Subjt:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHREQQIILVS

Query:  --------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHGRQILDATLVVSESVEDWKMLKKKG
                N   NETFICLI K+K + KV D RPISL TSLYK+++KVLA RL++VL STI+  Q+ FV GRQILDA L+ +E VE+ + L K G
Subjt:  --------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHGRQILDATLVVSESVEDWKMLKKKG

TrEMBL top hitse value%identityAlignment
A0A4Y1R3V4 VIRB2-interacting protein 24.7e-3641.52Show/hide
Query:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHR--------
        QW  +GD NT FFHR AS  + R FI  LE   G ++ SE EIE EI++F+ NLY+ +    + L+G++W  I      WL+R F E+E+ R        
Subjt:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHR--------

Query:  --------------------EQQIILVS---------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHG
                            ++ ++ V          N   NETFICLI K+K + KV D RPISL TSLYK+++KVLA RL++VL STI+  Q+ FV G
Subjt:  --------------------EQQIILVS---------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHG

Query:  RQILDATLVVSESVEDWKMLKKKG
        RQILDA L+ +E VE+ + L K G
Subjt:  RQILDATLVVSESVEDWKMLKKKG

A0A5E4FED8 Reverse transcriptase domain-containing protein (Fragment)1.2e-3947.18Show/hide
Query:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHREQQIILVS
        QW  +GD NT FFHR AS  + R FI  LE   G ++ SE EIE EI++F+ NLY+ +    + L+G++W  I      WL+R F E+E+ R   + +++
Subjt:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHREQQIILVS

Query:  --------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHGRQILDATLVVSESVEDWKMLKKKG
                N   NETFICLI K+K + KV D RPISL TSLYK+++KVLA RL++VL STI+  Q+ FV GRQILDA L+ +E VE+ + L K G
Subjt:  --------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHGRQILDATLVVSESVEDWKMLKKKG

A0A5E4GJ11 Reverse transcriptase domain-containing protein (Fragment)1.2e-3947.18Show/hide
Query:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHREQQIILVS
        QW  +GD NT FFHR AS  + R FI  LE   G ++ SE EIE EI++F+ NLY+ +    + L+G++W  I      WL+R F E+E+ R   + +++
Subjt:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHREQQIILVS

Query:  --------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHGRQILDATLVVSESVEDWKMLKKKG
                N   NETFICLI K+K + KV D RPISL TSLYK+++KVLA RL++VL STI+  Q+ FV GRQILDA L+ +E VE+ + L K G
Subjt:  --------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHGRQILDATLVVSESVEDWKMLKKKG

A0A5E4GN72 PREDICTED: RNA-directed DNA polymerase (Fragment)4.7e-3641.52Show/hide
Query:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHR--------
        QW  +GD NT FFHR AS  + R FI  LE   G ++ SE EIE EI++F+ NLY+ +    + L+G++W  I      WL+R F E+E+ R        
Subjt:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHR--------

Query:  --------------------EQQIILVS---------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHG
                            ++ ++ V          N   NETFICLI K+K + KV D RPISL TSLYK+++KVLA RL++VL STI+  Q+ FV G
Subjt:  --------------------EQQIILVS---------NKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHG

Query:  RQILDATLVVSESVEDWKMLKKKG
        RQILDA L+ +E VE+ + L K G
Subjt:  RQILDATLVVSESVEDWKMLKKKG

M5W647 Reverse transcriptase domain-containing protein (Fragment)3.5e-3947.18Show/hide
Query:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHREQQIIL--
        QW  +GD NT FFHR AS  + R FI  LE     ++ SE EIE EI++F+ NLY+ +    + L+G++W  I      WLER F E+E+ R   + +  
Subjt:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGISWILIKESNKIWLERRFTEDEIHREQQIIL--

Query:  ------VSNKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHGRQILDATLVVSESVEDWKMLKKKG
              + N   NETFICLI K+K + KV D RPISL TSLYK+++KVLA RL++VL STI+  Q+ FV GRQILDA L+ +E VE+ + L K G
Subjt:  ------VSNKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHGRQILDATLVVSESVEDWKMLKKKG

SwissProt top hitse value%identityAlignment
P14381 Transposon TX1 uncharacterized 149 kDa protein8.4e-0623.15Show/hide
Query:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADD----KRTRFTLDGISWILIKESNKIWLERRFTEDEIHREQQI
        Q L + D  + FF+       +R  I  L   DG  +   + I +   SFY NL++ D           DG+   ++ E  K  LE   T DE+ +  ++
Subjt:  QWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADD----KRTRFTLDGISWILIKESNKIWLERRFTEDEIHREQQI

Query:  ILVS------------------------NKRINETF-------------ICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTT
        +  +                        ++ + E F             + L+ K+ +   +++ RP+SL ++ YK++AK ++ RLK VL   I+  Q+ 
Subjt:  ILVS------------------------NKRINETF-------------ICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTT

Query:  FVHGRQILDATLVVSE
         V GR I D   ++ +
Subjt:  FVHGRQILDATLVVSE

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein4.7e-0420.09Show/hide
Query:  LFDSEFSSMDRWRI----EDGYHYPMVNTQWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGI---
        LF  E  +  +W       + ++      +WL++GD NT FFH+     +++  I  L   D   + +  +++E IV++Y +L   D     T D +   
Subjt:  LFDSEFSSMDRWRI----EDGYHYPMVNTQWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRTRFTLDGI---

Query:  --------------------------------------------------SWILIKESNKIWLERRFTEDEIHREQQIILVSNKRINETFICLISKRKNA
                                                          SW ++K+S    ++  F    +           KR N T I LI K    
Subjt:  --------------------------------------------------SWILIKESNKIWLERRFTEDEIHREQQIILVSNKRINETFICLISKRKNA

Query:  SKVRDLRPISLATSLYKVI
         ++   RP+S  T +YK+I
Subjt:  SKVRDLRPISLATSLYKVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATGGAAAGAGACATCAGCGTCCATGGAAGCTTCTCGCTGGAGATGGCTTGTGCCTTTCGCAGGGGCCTGTTCGACTCAGAATTCAGTAGCATGGACCGATGGAG
AATTGAGGATGGATACCATTATCCGATGGTTAATACCCAATGGCTAGAGGAAGGGGACGAGAATACAACTTTCTTTCACCGATGGGCCTCAAATATGAAAAGCAGAGCAT
TCATAGCTTTACTTGAAAAAGGAGATGGCAAACTTATGTCTTCGGAGAAAGAGATTGAAGAGGAAATAGTGAGCTTTTACAACAATTTATACGCTGATGACAAGAGAACC
AGATTCACCCTTGATGGTATATCGTGGATTCTTATCAAGGAGAGCAACAAAATTTGGCTGGAAAGAAGATTCACAGAGGATGAAATTCATAGAGAGCAGCAAATCATCCT
TGTGAGCAACAAGCGCATCAATGAAACTTTCATTTGCCTCATTTCCAAGAGGAAAAATGCTTCGAAAGTTAGAGATTTAAGACCTATAAGCTTGGCGACTTCTCTATATA
AGGTGATAGCAAAAGTATTAGCAGAGAGATTGAAAGATGTCCTCCCATCAACTATCAACGACAGTCAAACAACCTTTGTTCATGGGAGACAAATTCTTGATGCCACTCTA
GTAGTCTCTGAGTCGGTAGAGGATTGGAAGATGTTGAAGAAGAAGGGCTTTACTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAATGGAAAGAGACATCAGCGTCCATGGAAGCTTCTCGCTGGAGATGGCTTGTGCCTTTCGCAGGGGCCTGTTCGACTCAGAATTCAGTAGCATGGACCGATGGAG
AATTGAGGATGGATACCATTATCCGATGGTTAATACCCAATGGCTAGAGGAAGGGGACGAGAATACAACTTTCTTTCACCGATGGGCCTCAAATATGAAAAGCAGAGCAT
TCATAGCTTTACTTGAAAAAGGAGATGGCAAACTTATGTCTTCGGAGAAAGAGATTGAAGAGGAAATAGTGAGCTTTTACAACAATTTATACGCTGATGACAAGAGAACC
AGATTCACCCTTGATGGTATATCGTGGATTCTTATCAAGGAGAGCAACAAAATTTGGCTGGAAAGAAGATTCACAGAGGATGAAATTCATAGAGAGCAGCAAATCATCCT
TGTGAGCAACAAGCGCATCAATGAAACTTTCATTTGCCTCATTTCCAAGAGGAAAAATGCTTCGAAAGTTAGAGATTTAAGACCTATAAGCTTGGCGACTTCTCTATATA
AGGTGATAGCAAAAGTATTAGCAGAGAGATTGAAAGATGTCCTCCCATCAACTATCAACGACAGTCAAACAACCTTTGTTCATGGGAGACAAATTCTTGATGCCACTCTA
GTAGTCTCTGAGTCGGTAGAGGATTGGAAGATGTTGAAGAAGAAGGGCTTTACTCTTTAG
Protein sequenceShow/hide protein sequence
MLMERDISVHGSFSLEMACAFRRGLFDSEFSSMDRWRIEDGYHYPMVNTQWLEEGDENTTFFHRWASNMKSRAFIALLEKGDGKLMSSEKEIEEEIVSFYNNLYADDKRT
RFTLDGISWILIKESNKIWLERRFTEDEIHREQQIILVSNKRINETFICLISKRKNASKVRDLRPISLATSLYKVIAKVLAERLKDVLPSTINDSQTTFVHGRQILDATL
VVSESVEDWKMLKKKGFTL