; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027626 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027626
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:2628830..2630564
RNA-Seq ExpressionLag0027626
SyntenyLag0027626
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VVA38592.1 PREDICTED: reverse mRNAase, partial [Prunus dulcis]1.6e-7030.9Show/hide
Query:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-------------------------
        ++  ++ +EI  AV    PS+APG +G P LFYQKYW +VG+  V+   A L S   +++ NH  + LIPK++                           
Subjt:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-------------------------

Query:  -----------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEA
                                                                   RVE  +L ++M  +GF    + +VM C+TT  +S L+NGE 
Subjt:  -----------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEA

Query:  FGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSA-RDRSLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFF
           + P+RG+RQGDPLSPYLFLLC+EG + LL  A R   L  + I R  P + HLFFADDS VF KA     G+ ++I   YE+ S Q +N  KS V F
Subjt:  FGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSA-RDRSLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFF

Query:  SKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKE---------------------------------
        S N+ +DT+  L+ +L +   DS  +YLGLP    R KT  F++L ++VW  LQGW+ Q  S  GKE                                 
Subjt:  SKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKE---------------------------------

Query:  ---WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKVLRG------------------------------------
           W   G+ + +HW RW+ LCK K  GG+ FR L  FN AMLAKQ WR++ NP+   S++L+                                     
Subjt:  ---WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKVLRG------------------------------------

Query:  ------------SDPWIPRLTTFKVISHVDPRIADVKVAEYI--TPTVQWDEAKLQQYLVGEDVEMIKSLPISVAA
                     D W+PR  TF VI+     + + KV+E I    + QWD  KL    +  DV  I  +P+S+ A
Subjt:  ------------SDPWIPRLTTFKVISHVDPRIADVKVAEYI--TPTVQWDEAKLQQYLVGEDVEMIKSLPISVAA

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.7e-7534.01Show/hide
Query:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-------------------------
        +L  YT+EEI  A+R   P++A G +GFPALFYQ YW VVG  T+  CL  LN+   +K+WN   I LIPKI++                          
Subjt:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-------------------------

Query:  -----------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEA
                                                                   RVE +YL  IM K+GF+EG I  +++C++T  FSI LNG  
Subjt:  -----------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEA

Query:  FGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRS-LARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFF
         G  +PSRGIRQGDPLSPYLFLLC+EGLSAL+    +   L  +        I HL FADDSL+FL+++  E    R +L  Y + S Q +NF+KS + F
Subjt:  FGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRS-LARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFF

Query:  SKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKEWDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLV
        S NV  + +QYL  IL++K+   FG+YLGLPS F R +                                 G+ + +HW +W  +C PKE GG+NFRDL 
Subjt:  SKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKEWDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLV

Query:  NFNQAMLAKQAWRVLTNPNLTISKVLRG------------------------------------------------SDPWIPRLTTFKVISHVDPRIADV
         FNQA++AK  WR L +PNL +SKVL+                                                 SDPW+PR TTFK +   +  + D 
Subjt:  NFNQAMLAKQAWRVLTNPNLTISKVLRG------------------------------------------------SDPWIPRLTTFKVISHVDPRIADV

Query:  KVAEYITPTVQWDEAKLQQYLVGEDVEMIKSLPISVAAL-DRWI
         VA +IT    WD   +      ED ++I S+PIS   L D W+
Subjt:  KVAEYITPTVQWDEAKLQQYLVGEDVEMIKSLPISVAAL-DRWI

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]5.0e-7231.99Show/hide
Query:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-------------------------
        ++  +T+EE+  A++  HP++APG +G  A+F+QKYW +VGN      L +LN    + E N  NI LIPK                             
Subjt:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-------------------------

Query:  -----------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEA
                                                                   RVE  ++ ++ME++GF     +LVM+C+T+  +SIL+NG A
Subjt:  -----------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEA

Query:  FGFIKPSRGIRQGDPLSPYLFLLCSEGLSALL-VSARDRSLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFF
         G I PSRG+RQGDPLSP LFLLC+EGLSAL+  +AR++ +  +SI R CPK+ HLFFADDS++F KA  EE  + R+IL  YE+ S Q +N  KS++FF
Subjt:  FGFIKPSRGIRQGDPLSPYLFLLCSEGLSALL-VSARDRSLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFF

Query:  SKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKE---------------------------------
        S N   +TR  + +IL    +     YLGLPS   R K++ F  L +KV   L GWKG+L S GGKE                                 
Subjt:  SKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKE---------------------------------

Query:  ---WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKVLR--------------GSDP-------------------
           W     +  M W  W  +C  K  GG+ FR+L  FN AMLAKQAWR+L NPN  + +VL+              GS P                   
Subjt:  ---WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKVLR--------------GSDP-------------------

Query:  ---------------WIPRLTTFKVISHVDPRIADVKVAEYITPTVQWDEAK-LQQYLVGEDVEMIKSLPIS
                       W+P  +T+KVIS          V+  I P  +W + + L+   +  +VE I  +P+S
Subjt:  ---------------WIPRLTTFKVISHVDPRIADVKVAEYITPTVQWDEAK-LQQYLVGEDVEMIKSLPIS

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]4.2e-7135.21Show/hide
Query:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-------------------------
        ++  +TREEI +A+   HP++APG +G  A+F+QKYW++VGN  V   L +LNS  S+ E N  NI L+PKI+                           
Subjt:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-------------------------

Query:  -----------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEA
                                                                   RVE  +++Q+MEK+GFHE  I LVM C+T+  +SIL+NG A
Subjt:  -----------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEA

Query:  FGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVS-ARDRSLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFF
        +G I P+RG+RQGDP+SPY+FLLC++G S+LL   AR   ++ VSI R CPKI HLFFADDSL+F KA ++E     +IL  YE  S Q +N  KS+VFF
Subjt:  FGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVS-ARDRSLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFF

Query:  SKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKE---------------------------------
        S N P + R  +  +L          YLGLPS   + K   F  + ++V   L GWK +L S GG+E                                 
Subjt:  SKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKE---------------------------------

Query:  ---WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKVLR
           W   G +  + W  W +LCK K+ GG+ FR+L  FN AMLAKQ WR+++NPN  ++++ +
Subjt:  ---WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKVLR

XP_030923330.1 uncharacterized protein LOC115950239 [Quercus lobata]7.2e-7132.39Show/hide
Query:  YTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-----------------------------
        +T EE+ +A+    P++APG +G  ALFYQK+W +VG++ VS  L  LN+   + E NH NIVLIPK++                               
Subjt:  YTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-----------------------------

Query:  -------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEAFGFI
                                                               RVE  +L+ IMEK+GF  G I  VM C+TT  FSIL+NG+ +  I
Subjt:  -------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEAFGFI

Query:  KPSRGIRQGDPLSPYLFLLCSEGLSALLVSAR-DRSLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFFSKNV
        +PSRGIRQGDP+SPYLFLLC+EGL+ALL  A  +  +  VSI R  PKI +L FADDSL+F +A   E      IL  YE+ S Q +N  KS+ +FS N 
Subjt:  KPSRGIRQGDPLSPYLFLLCSEGLSALLVSAR-DRSLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFFSKNV

Query:  PVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKE------------------------------------W
            +  +  IL +K  D F  YLGLP+   R K   F  L D+VW  LQGWKG L S+ GKE                                    W
Subjt:  PVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKE------------------------------------W

Query:  DSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVL-------------------------TNPN--------LTISKVLRG-------
           G+++ +HW+ WD+L  PK+ GG+ FRDL  FN AMLAKQ WR++                          +PN        +    +L+        
Subjt:  DSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVL-------------------------TNPN--------LTISKVLRG-------

Query:  --------SDPWIPRLTTFKVISHVDPRIADVKVAEYITPTVQ-WDEAKLQQYLVGEDVEMIKSLPIS
                 D W+P   T KV++ V    +++ VAE I P    W+  +++     ++ E I  +P+S
Subjt:  --------SDPWIPRLTTFKVISHVDPRIADVKVAEYITPTVQ-WDEAKLQQYLVGEDVEMIKSLPIS

TrEMBL top hitse value%identityAlignment
A0A2N9F9E4 Reverse transcriptase domain-containing protein3.2e-7733.97Show/hide
Query:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIR---------------------------
        ++  +  EE+  A++   PS+APG +G P +FYQKYW VVG+   +  L+ LNS   +K  NH  I LIPK++                           
Subjt:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIR---------------------------

Query:  ------RARVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDR-SLARVSIARECP
                RVE SYL  +MEK+GFH+  I L+++C+++  +S+L+NGE  G I PSRG+RQGDPLSPYLFLLC+EGL +L+  A     +  V++ R  P
Subjt:  ------RARVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDR-SLARVSIARECP

Query:  KILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFFSKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWS
        KI HLFFADDSL+F KA         +IL  YE+ S Q VN  K+T+FFSK++P+ T+  +   L++ +   +  YLGLPS   R K   F  + ++VW 
Subjt:  KILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFFSKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWS

Query:  VLQGWKGQLFSQGGKE------------------------------------WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVL
         L+GWK +L SQ G+E                                    W +  ++Q ++W  W +LC+PK+ GG+ FRDL  FN+A+LAKQ WR++
Subjt:  VLQGWKGQLFSQGGKE------------------------------------WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVL

Query:  TNPNLTISKVL-----------------RGSDPWIPRLTTFKV-------------------------------ISHVDPRIADVKVAEYI-TPTVQWDE
         N +    +V                  RGS  W   L   +V                               ISH    + D  V + I  P ++WD 
Subjt:  TNPNLTISKVL-----------------RGSDPWIPRLTTFKV-------------------------------ISHVDPRIADVKVAEYI-TPTVQWDE

Query:  AKLQQYLVGEDVEMIKSLPIS
          L +  +  D E IK++P+S
Subjt:  AKLQQYLVGEDVEMIKSLPIS

A0A2N9HG19 Uncharacterized protein4.4e-7437.35Show/hide
Query:  YTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-----------------------------
        +T +E+ +A++   P +APG +G P LFYQ+YW ++G       L  LNS   +K  NH  I LIPK++                               
Subjt:  YTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-----------------------------

Query:  -------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEAFGFI
                                                               RVE  YL+++MEK+GFH   + L+M+C+TT  +SIL+NGE  GFI
Subjt:  -------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEAFGFI

Query:  KPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDR-SLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFFSKNV
        KP+RG+RQGDPLSPYLFL C EGL++L+  A++   L  VSI+R  PKI HLFFADDSL+F KA   +V   + IL +YE+ S Q +N  K+T+FFSK+ 
Subjt:  KPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDR-SLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFFSKNV

Query:  PVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKEWDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQ
        P   +  +  +L +     +  YLGLPS   R K   F  + ++VWS L+GWK +L SQ G+E    GD+  MHW  W+ LCK K  GG+  R+L  FN+
Subjt:  PVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKEWDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQ

Query:  AMLAKQAWRVLTNPNLTISKVLR
        A+LAKQ WR++ N +    KV +
Subjt:  AMLAKQAWRVLTNPNLTISKVLR

A0A2N9HZ73 Reverse transcriptase domain-containing protein2.6e-7441.16Show/hide
Query:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPK-------------IRRA--RVEGSYLRQI
        +L  YT  E+  A++   P +APG +  P +FYQ YW  +GN  V   L+ +NS   +   NH  + LIPK             I +A  RVE  +LRQ+
Subjt:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPK-------------IRRA--RVEGSYLRQI

Query:  MEKLGFHEGLINLVMKCLTTAMFSILLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALL-VSARDRSLARVSIARECPKILHLFFADDSLVFLKAV
        M K+GFH   ++L+M+C+TT  +S+L+NGE  G I  SRG+RQGDP+SPYLFL+C+EGL+ LL   A +  +  +SI R  PK+ HLFFADD+L+F +A 
Subjt:  MEKLGFHEGLINLVMKCLTTAMFSILLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALL-VSARDRSLARVSIARECPKILHLFFADDSLVFLKAV

Query:  AEEVGIFRNILLDYEKISRQYVNFAKSTVFFSKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKE--
          E    + IL  YEK S Q +N +K+T+FFS+N    T++ +  IL +     +  YLGLPS   + K + F  + ++VWS ++GWK +L SQ G+E  
Subjt:  AEEVGIFRNILLDYEKISRQYVNFAKSTVFFSKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKE--

Query:  ----WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKV
            W     ++ +HW +W +LC+ KE+GG+ FR+L  FN A+LAKQ WR++   +  + KV
Subjt:  ----WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKV

A0A6J1DX30 uncharacterized protein LOC1110248748.0e-7634.01Show/hide
Query:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-------------------------
        +L  YT+EEI  A+R   P++A G +GFPALFYQ YW VVG  T+  CL  LN+   +K+WN   I LIPKI++                          
Subjt:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-------------------------

Query:  -----------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEA
                                                                   RVE +YL  IM K+GF+EG I  +++C++T  FSI LNG  
Subjt:  -----------------------------------------------------------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEA

Query:  FGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRS-LARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFF
         G  +PSRGIRQGDPLSPYLFLLC+EGLSAL+    +   L  +        I HL FADDSL+FL+++  E    R +L  Y + S Q +NF+KS + F
Subjt:  FGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRS-LARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFF

Query:  SKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKEWDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLV
        S NV  + +QYL  IL++K+   FG+YLGLPS F R +                                 G+ + +HW +W  +C PKE GG+NFRDL 
Subjt:  SKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKEWDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLV

Query:  NFNQAMLAKQAWRVLTNPNLTISKVLRG------------------------------------------------SDPWIPRLTTFKVISHVDPRIADV
         FNQA++AK  WR L +PNL +SKVL+                                                 SDPW+PR TTFK +   +  + D 
Subjt:  NFNQAMLAKQAWRVLTNPNLTISKVLRG------------------------------------------------SDPWIPRLTTFKVISHVDPRIADV

Query:  KVAEYITPTVQWDEAKLQQYLVGEDVEMIKSLPISVAAL-DRWI
         VA +IT    WD   +      ED ++I S+PIS   L D W+
Subjt:  KVAEYITPTVQWDEAKLQQYLVGEDVEMIKSLPISVAAL-DRWI

A0A803PVM0 Uncharacterized protein2.2e-7833.4Show/hide
Query:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-------------------------
        ++  +T EEI +A+++ +P ++PG +G  A+FY KYW +VG+      L +LN   S++  NH+ I LIPK +                           
Subjt:  MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRA-------------------------

Query:  ---------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARD-RSLARVSIAREC
                 RVE  Y++++M K+GFH+  ++L+M CLT+  FS +LNGE  G ++P+RG+RQGDPLSPYLFL+CSEGLS LL +    R+L  + + R  
Subjt:  ---------RVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSILLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARD-RSLARVSIAREC

Query:  PKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFFSKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVW
        P I HL FADDSL+F +A  +     + +L  Y + S Q +N  KS + FS N    ++ +  + L M +S+    YLGLP+   R K   F  + +++W
Subjt:  PKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFFSKNVPVDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVW

Query:  SVLQGWKGQLFSQGGKE------------------------------------WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRV
          L  W  +LFS GGKE                                    W S  D   +HWR W  LCK K  GG+ FR  V+FN+A+LAKQAWR+
Subjt:  SVLQGWKGQLFSQGGKE------------------------------------WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRV

Query:  LTNPNLTISK------------------------------------------------VLRGSDPWIPRLTTFKVISHVDPRIADVKVAEYITPTVQWDE
           PN  +S+                                                VL GSD WIP    FK IS+  P  +++ VA +IT   +W+ 
Subjt:  LTNPNLTISK------------------------------------------------VLRGSDPWIPRLTTFKVISHVDPRIADVKVAEYITPTVQWDE

Query:  AKLQQYLVGEDVEMIKSLPIS
        A L+QY +  DV+ I ++P+S
Subjt:  AKLQQYLVGEDVEMIKSLPIS

SwissProt top hitse value%identityAlignment
P11369 LINE-1 retrotransposable element ORF2 protein1.4e-0823.11Show/hide
Query:  EEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRARVEGSYLRQIMEKLGFHEGLINLVMKCLTTAM
        +E I A+   HP +   + G    F            +   + +++    +K+ NH  I L  +    +++  ++ +++E+ G     +N++    +  +
Subjt:  EEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRARVEGSYLRQIMEKLGFHEGLINLVMKCLTTAM

Query:  FSILLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRSLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVN
         +I +NGE    I    G RQG PLSPYLF +  E L+  +   + + +  + I +E  KI  L  ADD +V++           N++  + ++    +N
Subjt:  FSILLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRSLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVN

Query:  FAKSTVF-FSKN
          KS  F ++KN
Subjt:  FAKSTVF-FSKN

P92555 Uncharacterized mitochondrial protein AtMg012502.7e-1238.94Show/hide
Query:  LLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRS-LARVSIARECPKILHLFFADD--SLVFLKAVAEEVGIFRNILLDYEKISRQYVN
        ++NG   G + PSRG+RQGDPLSPYLF+LC+E LS L   A+++  L  + ++   P+I HL FADD  S  ++   A+   IF    L         VN
Subjt:  LLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRS-LARVSIARECPKILHLFFADD--SLVFLKAVAEEVGIFRNILLDYEKISRQYVN

Query:  FAKSTVFFSKNVP
           S ++F  ++P
Subjt:  FAKSTVFFSKNVP

P93295 Uncharacterized mitochondrial protein AtMg003106.2e-0947.54Show/hide
Query:  WDSYGDKQSMHWRRWDELCKPKE-IGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKVLR
        W S  +K+ + W  W +LCK KE  GG+ FRDL  FNQA+LAKQ++R++  P+  +S++LR
Subjt:  WDSYGDKQSMHWRRWDELCKPKE-IGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKVLR

Q05118 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)2.1e-0432.98Show/hide
Query:  MEKLGFHEGLINLVMKCLTTAMFSILLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRSLARVSIARECPKILHLFFADDSLV
        M   G  +G+ + +M  +T A  +I++ G     I    G++QGDPLSP LF +  +     LV+  +      S+   C KI  L FADD L+
Subjt:  MEKLGFHEGLINLVMKCLTTAMFSILLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRSLARVSIARECPKILHLFFADDSLV

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.7e-0939.13Show/hide
Query:  WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKVLRG-----SDP
        W +  + + MHW+ WD L   K  GG+ F+D+  FN A+L KQ WR+L+ P   ++KV +      SDP
Subjt:  WDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKVLRG-----SDP

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.4e-1047.54Show/hide
Query:  WDSYGDKQSMHWRRWDELCKPKE-IGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKVLR
        W S  +K+ + W  W +LCK KE  GG+ FRDL  FNQA+LAKQ++R++  P+  +S++LR
Subjt:  WDSYGDKQSMHWRRWDELCKPKE-IGGVNFRDLVNFNQAMLAKQAWRVLTNPNLTISKVLR

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)1.9e-1338.94Show/hide
Query:  LLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRS-LARVSIARECPKILHLFFADD--SLVFLKAVAEEVGIFRNILLDYEKISRQYVN
        ++NG   G + PSRG+RQGDPLSPYLF+LC+E LS L   A+++  L  + ++   P+I HL FADD  S  ++   A+   IF    L         VN
Subjt:  LLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRS-LARVSIARECPKILHLFFADD--SLVFLKAVAEEVGIFRNILLDYEKISRQYVN

Query:  FAKSTVFFSKNVP
           S ++F  ++P
Subjt:  FAKSTVFFSKNVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATGACTTATACAAGAGAGGAAATCATCTCTGCCGTTAGAAGCTTCCATCCGTCTGAGGCCCCGGGGCTTAATGGTTTTCCAGCATTATTCTATCAGAAGTATTG
GGACGTGGTGGGGAACACAACGGTGTCCAATTGTTTGGCAATTTTGAATTCGAAGGGATCGGTGAAGGAATGGAACCATAATAATATAGTGCTCATACCGAAGATTCGAC
GGGCAAGGGTGGAAGGGTCATATTTGAGACAAATTATGGAAAAGTTGGGATTCCATGAAGGTTTGATCAATTTAGTTATGAAATGCCTAACAACTGCCATGTTTTCCATT
CTCTTAAATGGAGAAGCATTCGGGTTTATAAAACCATCTCGTGGTATTCGACAAGGTGATCCCTTATCCCCTTACCTGTTTTTGCTCTGCTCGGAAGGTCTTTCGGCCCT
CCTGGTGTCTGCAAGGGATAGATCCTTGGCGAGAGTTTCCATTGCACGTGAATGCCCTAAAATTTTGCACTTATTCTTTGCGGATGATAGTCTGGTGTTTCTGAAGGCTG
TGGCTGAGGAGGTTGGGATTTTCAGGAATATTCTGTTGGATTATGAGAAGATTTCTAGACAGTATGTAAATTTTGCTAAATCAACTGTGTTCTTTTCGAAAAATGTTCCT
GTGGATACCAGACAATATCTAAGTCATATCCTATCTATGAAAATGTCTGATTCTTTTGGGTCATATCTTGGGTTGCCTTCAACATTTCATAGAGGGAAAACTCGTGATTT
CCAATTTCTTCTAGACAAGGTTTGGTCTGTGCTACAGGGATGGAAAGGTCAATTATTTTCACAAGGAGGGAAAGAGTGGGACTCTTACGGTGACAAGCAAAGTATGCATT
GGAGGAGATGGGACGAGCTATGTAAACCAAAGGAGATTGGGGGAGTGAACTTTCGCGATTTGGTGAATTTTAACCAAGCTATGTTGGCAAAACAAGCTTGGAGGGTGCTA
ACGAATCCGAACCTGACCATATCCAAAGTTTTACGTGGAAGTGACCCATGGATTCCTCGTCTCACTACTTTTAAAGTGATTTCACATGTAGACCCAAGGATTGCGGATGT
GAAAGTGGCGGAATATATTACTCCAACCGTGCAATGGGATGAGGCGAAACTTCAACAATATTTGGTCGGGGAGGATGTGGAAATGATTAAAAGCTTGCCTATTAGTGTGG
CTGCCCTAGACAGATGGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAATGACTTATACAAGAGAGGAAATCATCTCTGCCGTTAGAAGCTTCCATCCGTCTGAGGCCCCGGGGCTTAATGGTTTTCCAGCATTATTCTATCAGAAGTATTG
GGACGTGGTGGGGAACACAACGGTGTCCAATTGTTTGGCAATTTTGAATTCGAAGGGATCGGTGAAGGAATGGAACCATAATAATATAGTGCTCATACCGAAGATTCGAC
GGGCAAGGGTGGAAGGGTCATATTTGAGACAAATTATGGAAAAGTTGGGATTCCATGAAGGTTTGATCAATTTAGTTATGAAATGCCTAACAACTGCCATGTTTTCCATT
CTCTTAAATGGAGAAGCATTCGGGTTTATAAAACCATCTCGTGGTATTCGACAAGGTGATCCCTTATCCCCTTACCTGTTTTTGCTCTGCTCGGAAGGTCTTTCGGCCCT
CCTGGTGTCTGCAAGGGATAGATCCTTGGCGAGAGTTTCCATTGCACGTGAATGCCCTAAAATTTTGCACTTATTCTTTGCGGATGATAGTCTGGTGTTTCTGAAGGCTG
TGGCTGAGGAGGTTGGGATTTTCAGGAATATTCTGTTGGATTATGAGAAGATTTCTAGACAGTATGTAAATTTTGCTAAATCAACTGTGTTCTTTTCGAAAAATGTTCCT
GTGGATACCAGACAATATCTAAGTCATATCCTATCTATGAAAATGTCTGATTCTTTTGGGTCATATCTTGGGTTGCCTTCAACATTTCATAGAGGGAAAACTCGTGATTT
CCAATTTCTTCTAGACAAGGTTTGGTCTGTGCTACAGGGATGGAAAGGTCAATTATTTTCACAAGGAGGGAAAGAGTGGGACTCTTACGGTGACAAGCAAAGTATGCATT
GGAGGAGATGGGACGAGCTATGTAAACCAAAGGAGATTGGGGGAGTGAACTTTCGCGATTTGGTGAATTTTAACCAAGCTATGTTGGCAAAACAAGCTTGGAGGGTGCTA
ACGAATCCGAACCTGACCATATCCAAAGTTTTACGTGGAAGTGACCCATGGATTCCTCGTCTCACTACTTTTAAAGTGATTTCACATGTAGACCCAAGGATTGCGGATGT
GAAAGTGGCGGAATATATTACTCCAACCGTGCAATGGGATGAGGCGAAACTTCAACAATATTTGGTCGGGGAGGATGTGGAAATGATTAAAAGCTTGCCTATTAGTGTGG
CTGCCCTAGACAGATGGATTTAG
Protein sequenceShow/hide protein sequence
MLMTYTREEIISAVRSFHPSEAPGLNGFPALFYQKYWDVVGNTTVSNCLAILNSKGSVKEWNHNNIVLIPKIRRARVEGSYLRQIMEKLGFHEGLINLVMKCLTTAMFSI
LLNGEAFGFIKPSRGIRQGDPLSPYLFLLCSEGLSALLVSARDRSLARVSIARECPKILHLFFADDSLVFLKAVAEEVGIFRNILLDYEKISRQYVNFAKSTVFFSKNVP
VDTRQYLSHILSMKMSDSFGSYLGLPSTFHRGKTRDFQFLLDKVWSVLQGWKGQLFSQGGKEWDSYGDKQSMHWRRWDELCKPKEIGGVNFRDLVNFNQAMLAKQAWRVL
TNPNLTISKVLRGSDPWIPRLTTFKVISHVDPRIADVKVAEYITPTVQWDEAKLQQYLVGEDVEMIKSLPISVAALDRWI