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Lag0027634 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027634
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtection of telomeres protein
Genome locationchr8:2703045..2703444
RNA-Seq ExpressionLag0027634
SyntenyLag0027634
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0043047 - single-stranded telomeric DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8651625.1 hypothetical protein MANES_06G005900v8 [Manihot esculenta]2.7e-0582.35Show/hide
Query:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFGL
        M  RDDYKF++IRD IASINQKVNLIG IIEFGL
Subjt:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFGL
XP_021616403.1 protection of telomeres protein 1a-like isoform X1 [Manihot esculenta]2.7e-0582.35Show/hide
Query:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFGL
        M  RDDYKF++IRD IASINQKVNLIG IIEFGL
Subjt:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFGL
XP_022137388.1 protection of telomeres protein 1a-like isoform X1 [Momordica charantia]1.2e-0587.88Show/hide
Query:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFG
        M+ RDDYKFMEIRD IASINQKVNLI VIIEFG
Subjt:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFG
XP_022137389.1 protection of telomeres protein 1a-like isoform X2 [Momordica charantia]1.2e-0587.88Show/hide
Query:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFG
        M+ RDDYKFMEIRD IASINQKVNLI VIIEFG
Subjt:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFG
XP_022954893.1 uncharacterized protein At3g17950-like [Cucurbita moschata]1.9e-0690.91Show/hide
Query:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFG
        M+ RDDYKFMEIRD IASINQKVNLIGVIIEFG
Subjt:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFG
TrEMBL top hitse value%identityAlignment
A0A2C9VN78 Telo_bind domain-containing protein1.3e-0582.35Show/hide
Query:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFGL
        M  RDDYKF++IRD IASINQKVNLIG IIEFGL
Subjt:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFGL
A0A5D3BL04 Protection of telomeres protein 1a-like isoform X12.9e-0587.1Show/hide
Query:  RRDDYKFMEIRDVIASINQKVNLIGVIIEFG
        R DDY+FMEIRD IASINQKVN+IGVIIEFG
Subjt:  RRDDYKFMEIRDVIASINQKVNLIGVIIEFG
A0A6J1C739 protection of telomeres protein 1a-like isoform X25.8e-0687.88Show/hide
Query:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFG
        M+ RDDYKFMEIRD IASINQKVNLI VIIEFG
Subjt:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFG
A0A6J1CA78 protection of telomeres protein 1a-like isoform X15.8e-0687.88Show/hide
Query:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFG
        M+ RDDYKFMEIRD IASINQKVNLI VIIEFG
Subjt:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFG
A0A6J1GSD5 uncharacterized protein At3g17950-like9.0e-0790.91Show/hide
Query:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFG
        M+ RDDYKFMEIRD IASINQKVNLIGVIIEFG
Subjt:  MDRRDDYKFMEIRDVIASINQKVNLIGVIIEFG
SwissProt top hitse value%identityAlignment
Q6NKX5 Protection of telomeres protein 1b8.1e-0540.98Show/hide
Query:  DRRDDYKFMEIRDVIASINQKVNLIGVIIEFGLRQGI-----------YSSSSSLPAKFAS
        +RRDDYKF+ I+D   +++  VNLIGVI+E G   G            + S S LP KF +
Subjt:  DRRDDYKFMEIRDVIASINQKVNLIGVIIEFGLRQGI-----------YSSSSSLPAKFAS
Arabidopsis top hitse value%identityAlignment
AT5G06310.1 Nucleic acid-binding, OB-fold-like protein5.8e-0640.98Show/hide
Query:  DRRDDYKFMEIRDVIASINQKVNLIGVIIEFGLRQGI-----------YSSSSSLPAKFAS
        +RRDDYKF+ I+D   +++  VNLIGVI+E G   G            + S S LP KF +
Subjt:  DRRDDYKFMEIRDVIASINQKVNLIGVIIEFGLRQGI-----------YSSSSSLPAKFAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGCGATGGATCGCAGAGACGATTACAAATTCATGGAGATTAGAGATGTCATTGCCTCCATTAATCAAAAAGTTAATCTCATTGGCGTCATCATTGAGTTCGGATT
GCGACAAGGAATCTACTCCTCTTCCTCATCTCTACCTGCCAAATTTGCTTCTCTTATTAAAGCTTGTGGAATTGAGTTTCGTGGAATTCCTCCTTTGGTTCAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGCGATGGATCGCAGAGACGATTACAAATTCATGGAGATTAGAGATGTCATTGCCTCCATTAATCAAAAAGTTAATCTCATTGGCGTCATCATTGAGTTCGGATT
GCGACAAGGAATCTACTCCTCTTCCTCATCTCTACCTGCCAAATTTGCTTCTCTTATTAAAGCTTGTGGAATTGAGTTTCGTGGAATTCCTCCTTTGGTTCAAGAATGA
Protein sequenceShow/hide protein sequence
MRAMDRRDDYKFMEIRDVIASINQKVNLIGVIIEFGLRQGIYSSSSSLPAKFASLIKACGIEFRGIPPLVQE