; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027639 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027639
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:2798141..2799503
RNA-Seq ExpressionLag0027639
SyntenyLag0027639
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011470556.1 PREDICTED: uncharacterized protein LOC105353255 [Fragaria vesca subsp. vesca]2.8e-3127Show/hide
Query:  GEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNS-----------TTSRVLREGC---------PEARWWKKLWKLRVPSKVKVF
        GEK ++HW+  E LC PK  GGL F++L  FN AMLAKQ WR++ N NS           +T++ +  G          P  + WK +W  +VP KV V 
Subjt:  GEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNS-----------TTSRVLREGC---------PEARWWKKLWKLRVPSKVKVF

Query:  VWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWGTVDIKDLWMGLTDFQVSD-----LEHFWQANPKGGAY
         W+S  N +PT  NL +        CL+C   +E   H    C  A+E W    +S+  +    V+++D  + L      D     L   W         
Subjt:  VWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWGTVDIKDLWMGLTDFQVSD-----LEHFWQANPKGGAY

Query:  I-------QSEEDILKIISRGEKTILHT-------------------------DAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVL
        +        SE  +L +    E T ++T                         D AF+ D    G G+V+RD  GQ RA         +SP   E IA+L
Subjt:  I-------QSEEDILKIISRGEKTILHT-------------------------DAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVL

Query:  EGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPILWLGNYPDWMVRLSLQERS
        EGL++A+   +S++   +D L L   +++     S++ T+I +++   + +       + R+ NR  H  A   L+ +    W    P+++  + L + S
Subjt:  EGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPILWLGNYPDWMVRLSLQERS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.5e-2724.48Show/hide
Query:  RSNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREG---------------------------------------
        R  GE R++HW K   +C PKE GGLNFRDL  FNQA++AK  WR L +PN   S+VL+                                         
Subjt:  RSNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREG---------------------------------------

Query:  ----------------------------------------------------CPEAR------------------W------------------------
                                                            C E R                  W                        
Subjt:  ----------------------------------------------------CPEAR------------------W------------------------

Query:  -----------WKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSM----HEDQWGTVDIKD
                   W  +WKL VP+K+K+F+W+S H  IPT  NL    +     C +C +  E+  HA F C RAR+IW  L   +     ED    +   +
Subjt:  -----------WKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSM----HEDQWGTVDIKD

Query:  LWMGLTD---------------------------FQVSDLE------------HFWQANPKGGAYIQSEEDILKIISRGEKTI---LHTDAAFMGDRGTS
        LW  LT+                            QVS +E            H            QS    +    R   ++   L+TDAA  G   ++
Subjt:  LWMGLTD---------------------------FQVSDLE------------HFWQANPKGGAYIQSEEDILKIISRGEKTI---LHTDAAFMGDRGTS

Query:  GIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFN
          G ++RD+   L A  S       SPL+ E   +LEGL+ A   + + L + SDSL  I +I  EI         + +I+ +   F  +SF   SR+ N
Subjt:  GIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFN

Query:  RFVHQTARVGLSSTS-PILWLGNYPDWMVRL
        R  H  A+ G++S S    WL N+P W++ L
Subjt:  RFVHQTARVGLSSTS-PILWLGNYPDWMVRL

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]1.7e-2824.32Show/hide
Query:  SNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLR------------------------------------------
        S G+KR +HW+K E+L + K  GGL FR+   FNQA++AKQAWR+L  PNS  SRVL+                                          
Subjt:  SNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLR------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  EGCPEA--RWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWGTVDIKDLWMGL
          C EA  ++W  LW L +P K+K+F+W++ +N +P+  NLWK  V     C  C+  +ET  HAL +C  AR+IW     S    +  + DI      +
Subjt:  EGCPEA--RWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWGTVDIKDLWMGL

Query:  T-DFQVSDLE-------HFWQANPK---GGAYIQ------SEEDILKIISRGEKT------------------------ILHTDAAFMGDRGTSGIGLVM
          + + SDLE         W A  K    G  +         E +L    R  K                          ++ DAAF     ++G+G V+
Subjt:  T-DFQVSDLE-------HFWQANPK---GGAYIQ------SEEDILKIISRGEKT------------------------ILHTDAAFMGDRGTSGIGLVM

Query:  RDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQT
        RD+ G++ A   +   +  S  + EA AVL GL++A++ DVS L I SD L ++ ++N      S I   I  I+     F+++    I R  N   H  
Subjt:  RDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQT

Query:  ARVGLSSTSPILWLGNYP
        A++ L   SP +WLGN P
Subjt:  ARVGLSSTSPILWLGNYP

XP_030477992.1 uncharacterized protein LOC115695034 [Cannabis sativa]2.0e-3728.13Show/hide
Query:  SNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLR-----------------EGC----------------------
        SNGE R++HWK  + LCK K  GGL FR LV+FNQAMLAKQAWR++ NPNS  SR+L+                  GC                      
Subjt:  SNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLR-----------------EGC----------------------

Query:  ----------------PEARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWG
                           ++W ++W   +P K+K+F+W+   N +P   +L+   V  +  C +C+   E+ +HA+  C R+R+ W    +++   Q+ 
Subjt:  ----------------PEARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWG

Query:  TVDIKDLWMGLTDFQVSDLEHFWQANPKGGAYIQSEEDILKII-SRGEKTILHTDAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAV
        ++  KD++     +    L+   +  P+ G    S     +   S G K  L TDAA    R    IG+V+ D   +++A  S+ FS    P V EA AV
Subjt:  TVDIKDLWMGLTDFQVSDLEHFWQANPKGGAYIQSEEDILKII-SRGEKTILHTDAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAV

Query:  LEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPILWLGNYPDW
         + ++ AQ        +++D  ++++ +N     +S    VI  I+ + +F   ++   + R FN   H+ AR+GL   + ++W G+ P +
Subjt:  LEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPILWLGNYPDW

XP_042952220.1 uncharacterized protein LOC122289300 [Carya illinoinensis]5.4e-3024.54Show/hide
Query:  EKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLR-EGCPEARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHV
        ++R++HW   E++ + K  GG+ FRDL +FN+AML+KQ W ++ +PNS  S+VL+ +  P A ++    K  V    +VF+W++ H A+PT  NL+K  +
Subjt:  EKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLR-EGCPEARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHV

Query:  PINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWGTVDIKDLWMGLTD-FQVSDLEHF--------WQAN--------PKGGAYIQSEEDIL
          +  C +CQ E ET  HAL+ C  A ++W      + +       +   +  ++  F  ++L+ F        W+ N              ++    ++
Subjt:  PINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWGTVDIKDLWMGLTD-FQVSDLEHF--------WQAN--------PKGGAYIQSEEDIL

Query:  KIISRGEKT-------------------------ILHTDAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLT
        ++++  E+T                          ++ D A    +G   IG+++RD  GQ+ A       +F  PL+ E+   L   ++A D  + R+ 
Subjt:  KIISRGEKT-------------------------ILHTDAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLT

Query:  ILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPILWLGNYPDWMVRL
        +  DSL +   + EE +  S  + ++ + R    +F +     + R  N+  H  A+  L+    I+ + + P W+  L
Subjt:  ILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPILWLGNYPDWMVRL

TrEMBL top hitse value%identityAlignment
A0A2N9GN35 Uncharacterized protein1.7e-2926.61Show/hide
Query:  GEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREGCPEARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHV
        GE R++HW     LCKPK+ GG+ FR+L  FN+A+LAKQ                       ++WK LW +RVP KV+ F+W++  NA+PTM+NL +  +
Subjt:  GEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREGCPEARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHV

Query:  PINGYCLVCQEEIETTEHALFQCLRAREIW---ELLHSSMHEDQWGTVDI-KDLWMGLTDFQVSDLEHF----WQANPKG--GAYIQSEEDILKIISR--
          +G C  C  E+E   HA+++C   + +W    +    + ++    +D+   ++   ++  +++L       WQ   K    A +   + I  +  R  
Subjt:  PINGYCLVCQEEIETTEHALFQCLRAREIW---ELLHSSMHEDQWGTVDI-KDLWMGLTDFQVSDLEHF----WQANPKG--GAYIQSEEDILKIISR--

Query:  ------GEKTILHT-------------------DAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDS
               E  + HT                   DAA      T+G+G+V+R+  G   AV    F       V EA+A    +++A D  V  + +  DS
Subjt:  ------GEKTILHT-------------------DAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDS

Query:  LTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPIL-WLGNYPDWM
        L +IN + ++    ++   +I DI+ +   F+R+ +  + ++ N   H  AR  L   S  L WL   P ++
Subjt:  LTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPIL-WLGNYPDWM

A0A2N9GXF5 Uncharacterized protein1.7e-2926.61Show/hide
Query:  GEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREGCPEARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHV
        GE R++HW     LCKPK+ GG+ FR+L  FN+A+LAKQ                       ++WK LW +RVP KV+ F+W++  NA+PTM+NL +  +
Subjt:  GEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREGCPEARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHV

Query:  PINGYCLVCQEEIETTEHALFQCLRAREIW---ELLHSSMHEDQWGTVDI-KDLWMGLTDFQVSDLEHF----WQANPKG--GAYIQSEEDILKIISR--
          +G C  C  E+E   HA+++C   + +W    +    + ++    +D+   ++   ++  +++L       WQ   K    A +   + I  +  R  
Subjt:  PINGYCLVCQEEIETTEHALFQCLRAREIW---ELLHSSMHEDQWGTVDI-KDLWMGLTDFQVSDLEHF----WQANPKG--GAYIQSEEDILKIISR--

Query:  ------GEKTILHT-------------------DAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDS
               E  + HT                   DAA      T+G+G+V+R+  G   AV    F       V EA+A    +++A D  V  + +  DS
Subjt:  ------GEKTILHT-------------------DAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDS

Query:  LTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPIL-WLGNYPDWM
        L +IN + ++    ++   +I DI+ +   F+R+ +  + ++ N   H  AR  L   S  L WL   P ++
Subjt:  LTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPIL-WLGNYPDWM

A0A2N9I8Z6 Reverse transcriptase domain-containing protein3.8e-2926.61Show/hide
Query:  GEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREGCPEARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHV
        GE R++HW     LCKPK+ GG+ FR+L  FN+A+LAKQ                       ++WK LW +RVP KV+ F+W++  NA+PTM+NL +  +
Subjt:  GEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREGCPEARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHV

Query:  PINGYCLVCQEEIETTEHALFQCLRAREIW---ELLHSSMHEDQWGTVDI-KDLWMGLTDFQVSDLEHF----WQANPKG--GAYIQSEEDILKIISR--
          +G C  C  E+E   HA+++C   + +W    +    + ++    +D+   ++   ++  +++L       WQ   K    A +   + I  +  R  
Subjt:  PINGYCLVCQEEIETTEHALFQCLRAREIW---ELLHSSMHEDQWGTVDI-KDLWMGLTDFQVSDLEHF----WQANPKG--GAYIQSEEDILKIISR--

Query:  ------GEKTILHT-------------------DAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDS
               E  + HT                   DAA      T+G+G+V+R+  G   AV    F       V EA+A    +++A D  V  + +  DS
Subjt:  ------GEKTILHT-------------------DAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDS

Query:  LTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPIL-WLGNYPDWM
        L +IN + ++    ++   +I DI+ +   F+R+ +  + ++ N   H  AR  L   S  L WL   P ++
Subjt:  LTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPIL-WLGNYPDWM

A0A6J1DX30 uncharacterized protein LOC1110248741.2e-2724.48Show/hide
Query:  RSNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREG---------------------------------------
        R  GE R++HW K   +C PKE GGLNFRDL  FNQA++AK  WR L +PN   S+VL+                                         
Subjt:  RSNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREG---------------------------------------

Query:  ----------------------------------------------------CPEAR------------------W------------------------
                                                            C E R                  W                        
Subjt:  ----------------------------------------------------CPEAR------------------W------------------------

Query:  -----------WKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSM----HEDQWGTVDIKD
                   W  +WKL VP+K+K+F+W+S H  IPT  NL    +     C +C +  E+  HA F C RAR+IW  L   +     ED    +   +
Subjt:  -----------WKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSM----HEDQWGTVDIKD

Query:  LWMGLTD---------------------------FQVSDLE------------HFWQANPKGGAYIQSEEDILKIISRGEKTI---LHTDAAFMGDRGTS
        LW  LT+                            QVS +E            H            QS    +    R   ++   L+TDAA  G   ++
Subjt:  LWMGLTD---------------------------FQVSDLE------------HFWQANPKGGAYIQSEEDILKIISRGEKTI---LHTDAAFMGDRGTS

Query:  GIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFN
          G ++RD+   L A  S       SPL+ E   +LEGL+ A   + + L + SDSL  I +I  EI         + +I+ +   F  +SF   SR+ N
Subjt:  GIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFN

Query:  RFVHQTARVGLSSTS-PILWLGNYPDWMVRL
        R  H  A+ G++S S    WL N+P W++ L
Subjt:  RFVHQTARVGLSSTS-PILWLGNYPDWMVRL

A0A803QHJ7 Uncharacterized protein2.8e-3226.68Show/hide
Query:  SNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVL-------------------------------------------
        S+ + +++HW K E LCKPK+ GG+ F DL  FNQA+LAKQ WR +  P +  +RVL                                           
Subjt:  SNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVL-------------------------------------------

Query:  -REGCP------------EARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQ-EEIETTEHALFQCLRAREIWELLHSSMHEDQ
         R  C               +WW+KLW+L++P K+KVFVWK  H  +PT   L K HV   G C  C     E   HA ++C +++ +W   ++ +H   
Subjt:  -REGCP------------EARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQ-EEIETTEHALFQCLRAREIWELLHSSMHEDQ

Query:  WGTVDIKDLWMGLTDFQVSDLEHFWQANPKGGAYIQSEEDILKIISRGEKTILHTDAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIA
         G V        + ++    L  F     +    ++ EE + K+   GE  I + D       G SG+G V+R   G +    S+      SPL  E +A
Subjt:  WGTVDIKDLWMGLTDFQVSDLEHFWQANPKGGAYIQSEEDILKIISRGEKTILHTDAAFMGDRGTSGIGLVMRDNLGQLRAVQSSGFSVFSSPLVGEAIA

Query:  VLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPILWL
        +L+G++      +   +I SD L  I +I ++  G   +  ++  IR++ +    +   F+ R+ N+  H  A   L      +W+
Subjt:  VLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPILWL

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657503.6e-0531.33Show/hide
Query:  SNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLRE-----GCPEARW------WKKLWK
        S  EK++ H  K  ++C PK+ GGL  R   + N+A+++K  WR+L   NS  + VL++        ++RW      W   W+
Subjt:  SNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLRE-----GCPEARW------WKKLWK

P0C2F6 Putative ribonuclease H protein At1g657506.2e-0533.33Show/hide
Query:  ARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIW
        A ++  LWK+RVP +VK F+W   + A+ T     + H+  +  C VC+  +E+  H L  C     IW
Subjt:  ARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIW

P93295 Uncharacterized mitochondrial protein AtMg003101.3e-0752.73Show/hide
Query:  KRRMHWKKCEELCKPKE-IGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLR
        KR++ W   ++LCK KE  GGL FRDL  FNQA+LAKQ++R++  P++  SR+LR
Subjt:  KRRMHWKKCEELCKPKE-IGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLR

Arabidopsis top hitse value%identityAlignment
AT1G10000.1 Ribonuclease H-like superfamily protein2.4e-1223.69Show/hide
Query:  KVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWGTVDI-------KDLWMGLTDFQVSDL-----E
        K+K+F+WK+   A+P    L + H+     C  C    ET+ H LF C  A ++W L    +     GT  +       K + +       + L      
Subjt:  KVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWGTVDI-------KDLWMGLTDFQVSDL-----E

Query:  HFWQANPK---GGAYIQSEEDILKIIS----------------------RGEKTILH-----TDAAFMGDRGTSGIGLVMRDNLGQLRAVQ--SSGFSVF
        H W+A  +     ++    E + K +                           T+ H      DAA+      +G G V +      + +   S+G   F
Subjt:  HFWQANPK---GGAYIQSEEDILKIIS----------------------RGEKTILH-----TDAAFMGDRGTSGIGLVMRDNLGQLRAVQ--SSGFSVF

Query:  SSPLVGEAIAVLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGL
         SPL  EA A+   +  A   + S L +LSDS ++++ +N  +   + I  ++ +IR +RN F  +SF+FI R  N      A++ L
Subjt:  SSPLVGEAIAVLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGL

AT2G02650.1 Ribonuclease H-like superfamily protein3.6e-0821.36Show/hide
Query:  LWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWGT----VDIKDLWMGLTDFQVSD-L
        +WKL V  K+K F+W+    A+ T   L   ++  +  C  C  E ET  H +F C   + +W   +  +  +QWG      D  +  + L+  Q ++ L
Subjt:  LWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWGT----VDIKDLWMGLTDFQVSD-L

Query:  EHF------WQANPKGGAY----------------IQSEEDILKIISRGEKTILHT---------------------------DAAFMGDRGTSGIGLVM
        + F      W+       +                IQ   + L      E T +H                            D+ +      +  G  +
Subjt:  EHF------WQANPKGGAY----------------IQSEEDILKIISRGEKTILHT---------------------------DAAFMGDRGTSGIGLVM

Query:  RDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFN------
        R+  G +    ++     +  L  EA+  L  L++     +  +   SDS +L+ +IN   + HS + T+I+DIR         S +F++R+ N      
Subjt:  RDNLGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFN------

Query:  -RFVHQTARVGLSSTSPILWLGN
           VH    +  S T+P  WL N
Subjt:  -RFVHQTARVGLSSTSPILWLGN

AT3G25270.1 Ribonuclease H-like superfamily protein7.3e-0937.5Show/hide
Query:  KLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIW
        K+WKL+   K+K F+WK    A+ T  NL + H+  +  C  C +E ET++H  F C  A+++W
Subjt:  KLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYCLVCQEEIETTEHALFQCLRAREIW

AT4G29090.1 Ribonuclease H-like superfamily protein1.1e-0937.78Show/hide
Query:  RSNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREGCPEARWWKKLWKLRVP-SKVKVFVWKSFH
        R+  E + MHWK  + L   K  GG+ F+D+  FN A+L KQ WR+L+ P S  ++V +     +R++ K   L  P      FVWKS H
Subjt:  RSNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREGCPEARWWKKLWKLRVP-SKVKVFVWKSFH

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.5e-0952.73Show/hide
Query:  KRRMHWKKCEELCKPKE-IGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLR
        KR++ W   ++LCK KE  GGL FRDL  FNQA+LAKQ++R++  P++  SR+LR
Subjt:  KRRMHWKKCEELCKPKE-IGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCCAATGGGGAAAAAAGGAGAATGCATTGGAAGAAGTGTGAGGAGCTTTGCAAGCCAAAGGAAATTGGGGGATTAAATTTCAGAGATCTAGTAAATTTCAACCA
GGCAATGTTGGCAAAACAGGCTTGGAGGGTGTTGACTAATCCGAATAGTACTACTTCCAGAGTTTTGCGAGAAGGTTGTCCGGAAGCGAGATGGTGGAAGAAGCTTTGGA
AGTTAAGAGTACCTAGTAAGGTGAAAGTTTTCGTATGGAAATCTTTCCATAATGCTATCCCAACAATGATTAACTTATGGAAGCATCATGTGCCGATTAATGGATATTGT
CTTGTTTGCCAAGAGGAGATCGAGACTACCGAGCATGCTCTTTTCCAATGTCTGAGAGCCCGAGAGATTTGGGAGCTATTACATTCGTCAATGCATGAAGATCAATGGGG
TACAGTGGATATCAAAGATCTTTGGATGGGGTTGACTGATTTCCAGGTGTCGGATCTTGAACATTTTTGGCAGGCAAACCCTAAGGGCGGAGCATATATTCAGTCAGAGG
AGGACATTTTGAAGATCATCTCACGAGGCGAGAAGACTATTTTGCACACTGATGCAGCATTTATGGGAGACAGAGGCACAAGTGGTATTGGGTTAGTAATGCGGGACAAT
TTAGGGCAACTTCGAGCAGTTCAATCATCAGGTTTTTCTGTTTTTTCATCCCCTTTGGTGGGGGAAGCGATTGCGGTGCTAGAGGGACTTCGTATGGCTCAGGATTTTGA
TGTGAGTAGGTTAACGATTTTGTCCGACTCGTTGACCTTAATTAACATTATTAACGAGGAAATACAAGGTCATTCTAGTATTGCCACAGTTATTTGGGATATTAGAGTCA
TGAGAAATTTCTTCGAGCGTATGAGTTTTAAATTCATTAGTCGTAAGTTTAATAGGTTTGTTCATCAAACGGCCCGTGTTGGCCTATCTTCTACTTCACCGATTTTGTGG
CTAGGAAACTATCCTGATTGGATGGTTAGGTTGTCGCTCCAAGAGCGTAGTATGTTTGTATCTCTTCAGGGTTCTTTTGTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGATCCAATGGGGAAAAAAGGAGAATGCATTGGAAGAAGTGTGAGGAGCTTTGCAAGCCAAAGGAAATTGGGGGATTAAATTTCAGAGATCTAGTAAATTTCAACCA
GGCAATGTTGGCAAAACAGGCTTGGAGGGTGTTGACTAATCCGAATAGTACTACTTCCAGAGTTTTGCGAGAAGGTTGTCCGGAAGCGAGATGGTGGAAGAAGCTTTGGA
AGTTAAGAGTACCTAGTAAGGTGAAAGTTTTCGTATGGAAATCTTTCCATAATGCTATCCCAACAATGATTAACTTATGGAAGCATCATGTGCCGATTAATGGATATTGT
CTTGTTTGCCAAGAGGAGATCGAGACTACCGAGCATGCTCTTTTCCAATGTCTGAGAGCCCGAGAGATTTGGGAGCTATTACATTCGTCAATGCATGAAGATCAATGGGG
TACAGTGGATATCAAAGATCTTTGGATGGGGTTGACTGATTTCCAGGTGTCGGATCTTGAACATTTTTGGCAGGCAAACCCTAAGGGCGGAGCATATATTCAGTCAGAGG
AGGACATTTTGAAGATCATCTCACGAGGCGAGAAGACTATTTTGCACACTGATGCAGCATTTATGGGAGACAGAGGCACAAGTGGTATTGGGTTAGTAATGCGGGACAAT
TTAGGGCAACTTCGAGCAGTTCAATCATCAGGTTTTTCTGTTTTTTCATCCCCTTTGGTGGGGGAAGCGATTGCGGTGCTAGAGGGACTTCGTATGGCTCAGGATTTTGA
TGTGAGTAGGTTAACGATTTTGTCCGACTCGTTGACCTTAATTAACATTATTAACGAGGAAATACAAGGTCATTCTAGTATTGCCACAGTTATTTGGGATATTAGAGTCA
TGAGAAATTTCTTCGAGCGTATGAGTTTTAAATTCATTAGTCGTAAGTTTAATAGGTTTGTTCATCAAACGGCCCGTGTTGGCCTATCTTCTACTTCACCGATTTTGTGG
CTAGGAAACTATCCTGATTGGATGGTTAGGTTGTCGCTCCAAGAGCGTAGTATGTTTGTATCTCTTCAGGGTTCTTTTGTTTCTTAA
Protein sequenceShow/hide protein sequence
MRSNGEKRRMHWKKCEELCKPKEIGGLNFRDLVNFNQAMLAKQAWRVLTNPNSTTSRVLREGCPEARWWKKLWKLRVPSKVKVFVWKSFHNAIPTMINLWKHHVPINGYC
LVCQEEIETTEHALFQCLRAREIWELLHSSMHEDQWGTVDIKDLWMGLTDFQVSDLEHFWQANPKGGAYIQSEEDILKIISRGEKTILHTDAAFMGDRGTSGIGLVMRDN
LGQLRAVQSSGFSVFSSPLVGEAIAVLEGLRMAQDFDVSRLTILSDSLTLINIINEEIQGHSSIATVIWDIRVMRNFFERMSFKFISRKFNRFVHQTARVGLSSTSPILW
LGNYPDWMVRLSLQERSMFVSLQGSFVS