; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027680 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027680
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:3420749..3427009
RNA-Seq ExpressionLag0027680
SyntenyLag0027680
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAK39575.1 putative reverse transcriptase [Oryza sativa Japonica Group]1.7e-3829.35Show/hide
Query:  WNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWKLYNNILPTRA
        W+   + + F   DA  IL+I +++ +  D I WH D  G+FSVRSAYRL  Q+  + E+S S    I   W+M WK +VP K+KI  W++ +N L T  
Subjt:  WNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWKLYNNILPTRA

Query:  NLINRGMDINPLCILCRDKPETATHLFWE-------YYCEHTWRDHSTGRLEDLYIKKWMIIC----------------WHIWAHRNAVFHSNQKPDPVH
        N   R ++ + +C +C  + E   H           + C H     S      +  + W+  C                W  W  RN + H    P P  
Subjt:  NLINRGMDINPLCILCRDKPETATHLFWE-------YYCEHTWRDHSTGRLEDLYIKKWMIIC----------------WHIWAHRNAVFHSNQKPDPVH

Query:  LKQKITTSMEELI----QVEDTDLEAGRSM---------PSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRW
          Q+   S  +L+    Q    DL  G+ +         P    +      W  P  G  KLN D S+  + G+GGLG +LR   G  +    K + R  
Subjt:  LKQKITTSMEELI----QVEDTDLEAGRSM---------PSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRW

Query:  NVNWLESAAVIEGIR-AIPSVSPSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMA
        N    E  A +EG++ AI      +Q+E D   VV+LL G   DF+ ++  I +A+ L+    V SI  + R  N ++H+LA+ A
Subjt:  NVNWLESAAVIEGIR-AIPSVSPSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMA

TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]1.7e-3828.61Show/hide
Query:  MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWK
        +++L  P+  WN  L++ +F+ +DA+ ILS+P  +  + D + WH D +G ++VRS Y++ + ++   +   S+   +   W+  WK  +P K KI  WK
Subjt:  MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWK

Query:  LYNNILPTRANLINRGMDINPLCILCRDKPETATHLFWE-YYCEHTWRD-------------------HSTGRLEDLYIKKWMII-CWHIWAHRNAVFHS
         +N  LPT A L  R +D+   C +C D  E+ TH+ W        WR                     S  R  D  +   +II  W +W +RN+V H 
Subjt:  LYNNILPTRANLINRGMDINPLCILCRDKPETATHLFWE-YYCEHTWRD-------------------HSTGRLEDLYIKKWMII-CWHIWAHRNAVFHS

Query:  NQKPDPVHLKQKITTSMEEL-IQVEDTDLEAGRSMPSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRWNVNW
        +       +   I     E  +  E    E     PS          W+ P  G +K+NCDAS+    G+ G+G ++R + GS + A    +    +V  
Subjt:  NQKPDPVHLKQKITTSMEEL-IQVEDTDLEAGRSMPSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRWNVNW

Query:  LESAAVIEGIRAIPSVSPS-VQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFP
        LE+ A +EGI     +  S V IE D+  V++LL  +    TE+   I  + AL +  N+ S   V R  N +AH +A  A   ++   WF   P
Subjt:  LESAAVIEGIRAIPSVSPS-VQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFP

XP_030483481.1 uncharacterized protein LOC115700065 [Cannabis sativa]8.0e-4130.22Show/hide
Query:  MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWK
        +A L+   R WN+ L+ E F   D + IL+IPL+  +  D +IWH  S GI+ V S Y     ++    +S SN     N WK FWK Q+P KIKI  W+
Subjt:  MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWK

Query:  LYNNILPTRANLINRGMDINPLCILCRDKPETATH-LFWEYYCEHTWRDHSTG------------------RLEDLYIKKWM--IIC--WHIWAHRNAVF
        ++++ LP   +L+ R +  +  C +CR   E+  H LF   Y +  WR  +TG                   L  ++ K  M  IIC  W IW  RN + 
Subjt:  LYNNILPTRANLINRGMDINPLCILCRDKPETATH-LFWEYYCEHTWRDHSTG------------------RLEDLYIKKWM--IIC--WHIWAHRNAVF

Query:  HSNQKPDPVHLKQKITTSMEELIQVEDTDLEAGRSMPSTTA------IPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVIN
        H  +    V L    T  +           +A    P  TA       P  +S WRPP  G  K+N DA+ + +  + G+G V+R   G+ + A  K + 
Subjt:  HSNQKPDPVHLKQKITTSMEELIQVEDTDLEAGRSMPSTTA------IPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVIN

Query:  RRWNVNWLESAAVIEGIRAIPSVSPSV-QIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNS
          +  + +E+ AV   +     +   + QIE D++ V   L+G +   +     I D   L+S     S+ H  R  N  AHYLA  A   + +  W +S
Subjt:  RRWNVNWLESAAVIEGIRAIPSVSPSV-QIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNS

Query:  FPSWFLSLNNVDIGHTS
        FP    SLN+V +   S
Subjt:  FPSWFLSLNNVDIGHTS

XP_030498122.1 uncharacterized protein LOC115713779 [Cannabis sativa]6.3e-3829.95Show/hide
Query:  MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWK
        +A L+   R W+ S V   F + D + ILSIPL+   + D +IW+  + G +SV+S Y     + +  +   SN    E+ W  FWK Q+P K++I  WK
Subjt:  MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWK

Query:  LYNNILPTRANLINRGMDINPLCILCRDKPETATH-LFWEYYCEHTWRD--------------------HSTGRLEDLYIKKWMIICWHIWAHRNAVFHS
        +++N+LP  + L  R +  +P C LC+ + ET  H LF     +  W+                     + +G    L  ++++ +CW IW  RNA FH 
Subjt:  LYNNILPTRANLINRGMDINPLCILCRDKPETATH-LFWEYYCEHTWRD--------------------HSTGRLEDLYIKKWMIICWHIWAHRNAVFHS

Query:  NQKPDPVHLK----QKIT--TSMEELIQVEDTDLEAGRSMPSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRR
             P  +K    Q I    S+     V   D+      P++T+  PS   W+ P  G +KLN DA++ +T    G+G VLR   G    A  K I+  
Subjt:  NQKPDPVHLK----QKIT--TSMEELIQVEDTDLEAGRSMPSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRR

Query:  WNVNWLESAAVIEGIRAIPSVSPSVQ-IEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMA--CDTNAS
        +    +E+ A++  ++ + S+  S   IE DSL VV+ L   +   +     + D   L+S    A + HV R  N  AH LA  A   DT+ S
Subjt:  WNVNWLESAAVIEGIRAIPSVSPSVQ-IEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMA--CDTNAS

XP_030508852.1 uncharacterized protein LOC115723496 [Cannabis sativa]7.5e-3928.64Show/hide
Query:  MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWK
        +A L+   R W+   ++  F + D N +LSIPL+     D +IW+    G+++V+S Y   V + +  +++ SN   IE+ W  FWK ++PPK++I  WK
Subjt:  MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWK

Query:  LYNNILPTRANLINRGMDINPLCILCRDKPETATH-LFWEYYCEHTWR------DHST--------------GRLEDLYIKKWMIICWHIWAHRNAVFHS
        +++  LP  A L  R +  +P C +C    ET  H LF     +  W       D  T                L    ++ ++++CW IW  RNA++H 
Subjt:  LYNNILPTRANLINRGMDINPLCILCRDKPETATH-LFWEYYCEHTWR------DHST--------------GRLEDLYIKKWMIICWHIWAHRNAVFHS

Query:  NQKPDPVHLKQKITTSMEELIQVEDTDLEAGRSMPSTTAIPPSNS-----GWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRW
        N    P  +     + + E  Q    + +   +  + T   PS+       W  P  G  KLN DA+  + R   G+G VLR  DG  V A  K     +
Subjt:  NQKPDPVHLKQKITTSMEELIQVEDTDLEAGRSMPSTTAIPPSNS-----GWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRW

Query:  NVNWLESAAVIEGIRAIPSVSPSVQ-IEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFPS
            +E+  +   +  + S + SV  IE DSL VV+ L   +   +     + +   L+S    A I HVSR  N  AH LA  A   +    W  +FPS
Subjt:  NVNWLESAAVIEGIRAIPSVSPSVQ-IEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFPS

Query:  WFLSL
          ++L
Subjt:  WFLSL

TrEMBL top hitse value%identityAlignment
A0A5B7A5C8 Uncharacterized protein1.2e-3927.46Show/hide
Query:  WNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQI----QQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWKLYNNIL
        W + L+    +  D   I  IPL+     D ++WH    G+FSVRSAY + V I        E+  SN + ++ LWK  W   +P KIKI  W+   +IL
Subjt:  WNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQI----QQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWKLYNNIL

Query:  PTRANLINRGMDINPLCILCRDKPETATHLF---------WEYYCEHTWRDHS-----------TGRLEDLYIKKWMIICWHIWAHRNAVFHSNQKPDPV
        PT   L  R + ++  C LC D+ ET  HLF         WE +  H  +D                L+   ++   I+ W +W HRNA+ HS +   PV
Subjt:  PTRANLINRGMDINPLCILCRDKPETATHLF---------WEYYCEHTWRDHS-----------TGRLEDLYIKKWMIICWHIWAHRNAVFHSNQKPDPV

Query:  HLKQKITTSMEELIQVEDTDLEAGRSMPSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRWNVNWLESAAVIE
         +    + +++ L + +D   + G  +     +   ++ W PP  GV+KLN D SW      GG+G V+R W G  +    K + +  + +  ++ A++ 
Subjt:  HLKQKITTSMEELIQVEDTDLEAGRSMPSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRWNVNWLESAAVIE

Query:  GIRAIPSVS-PSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFPSWFLSLNNVD
        GI     +    + +E D L V+  +   ++D +++   ++D K  ++      + HV R  N +AH LA      ++        PS F    N D
Subjt:  GIRAIPSVS-PSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFPSWFLSLNNVD

A0A5C7H0P0 Uncharacterized protein8.1e-3928.61Show/hide
Query:  MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWK
        +++L  P+  WN  L++ +F+ +DA+ ILS+P  +  + D + WH D +G ++VRS Y++ + ++   +   S+   +   W+  WK  +P K KI  WK
Subjt:  MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWK

Query:  LYNNILPTRANLINRGMDINPLCILCRDKPETATHLFWE-YYCEHTWRD-------------------HSTGRLEDLYIKKWMII-CWHIWAHRNAVFHS
         +N  LPT A L  R +D+   C +C D  E+ TH+ W        WR                     S  R  D  +   +II  W +W +RN+V H 
Subjt:  LYNNILPTRANLINRGMDINPLCILCRDKPETATHLFWE-YYCEHTWRD-------------------HSTGRLEDLYIKKWMII-CWHIWAHRNAVFHS

Query:  NQKPDPVHLKQKITTSMEEL-IQVEDTDLEAGRSMPSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRWNVNW
        +       +   I     E  +  E    E     PS          W+ P  G +K+NCDAS+    G+ G+G ++R + GS + A    +    +V  
Subjt:  NQKPDPVHLKQKITTSMEEL-IQVEDTDLEAGRSMPSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRWNVNW

Query:  LESAAVIEGIRAIPSVSPS-VQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFP
        LE+ A +EGI     +  S V IE D+  V++LL  +    TE+   I  + AL +  N+ S   V R  N +AH +A  A   ++   WF   P
Subjt:  LESAAVIEGIRAIPSVSPS-VQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFP

A0A5S6RD43 Putative reverse transcriptase8.1e-3929.35Show/hide
Query:  WNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWKLYNNILPTRA
        W+   + + F   DA  IL+I +++ +  D I WH D  G+FSVRSAYRL  Q+  + E+S S    I   W+M WK +VP K+KI  W++ +N L T  
Subjt:  WNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWKLYNNILPTRA

Query:  NLINRGMDINPLCILCRDKPETATHLFWE-------YYCEHTWRDHSTGRLEDLYIKKWMIIC----------------WHIWAHRNAVFHSNQKPDPVH
        N   R ++ + +C +C  + E   H           + C H     S      +  + W+  C                W  W  RN + H    P P  
Subjt:  NLINRGMDINPLCILCRDKPETATHLFWE-------YYCEHTWRDHSTGRLEDLYIKKWMIIC----------------WHIWAHRNAVFHSNQKPDPVH

Query:  LKQKITTSMEELI----QVEDTDLEAGRSM---------PSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRW
          Q+   S  +L+    Q    DL  G+ +         P    +      W  P  G  KLN D S+  + G+GGLG +LR   G  +    K + R  
Subjt:  LKQKITTSMEELI----QVEDTDLEAGRSM---------PSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRW

Query:  NVNWLESAAVIEGIR-AIPSVSPSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMA
        N    E  A +EG++ AI      +Q+E D   VV+LL G   DF+ ++  I +A+ L+    V SI  + R  N ++H+LA+ A
Subjt:  NVNWLESAAVIEGIR-AIPSVSPSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMA

A0A803PH33 Uncharacterized protein9.2e-4330.05Show/hide
Query:  MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWK
        +A L+   R W+ S V   F + D + ILSIPL+   + D +IW+  + G +SV+S Y     + +  +   SN    E+ W  FWK Q+P K++I  WK
Subjt:  MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWK

Query:  LYNNILPTRANLINRGMDINPLCILCRDKPETATH-LFWEYYCEHTWRD--------------------HSTGRLEDLYIKKWMIICWHIWAHRNAVFHS
        +++N+LP  + L  R +  +P C LC+ + ET  H LF     +  WR                     + +     L  ++++ +CW IW  RNA FH 
Subjt:  LYNNILPTRANLINRGMDINPLCILCRDKPETATH-LFWEYYCEHTWRD--------------------HSTGRLEDLYIKKWMIICWHIWAHRNAVFHS

Query:  NQKPDPVHLK----QKIT--TSMEELIQVEDTDLEAGRSMPSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRR
             P  +K    Q IT   S+ +   V   D+      P++T   PS   W+ P  G +KLN DA++ +T    G+G VLR   G    A  K I+  
Subjt:  NQKPDPVHLK----QKIT--TSMEELIQVEDTDLEAGRSMPSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRR

Query:  WNVNWLESAAVIEGIRAIPSVSPSVQ-IEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFP
        + V  +E+ A++  ++ + S+  S   IE DSL VV+ L   +   +     + D   L+S    A + HV R  N  AH LA  A   +   SW   FP
Subjt:  WNVNWLESAAVIEGIRAIPSVSPSVQ-IEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFP

Query:  SWFLSL
        S  +++
Subjt:  SWFLSL

Q94HY0 Retrotransposon protein, putative, unclassified8.1e-3929.35Show/hide
Query:  WNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWKLYNNILPTRA
        W+   + + F   DA  IL+I +++ +  D I WH D  G+FSVRSAYRL  Q+  + E+S S    I   W+M WK +VP K+KI  W++ +N L T  
Subjt:  WNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWKLYNNILPTRA

Query:  NLINRGMDINPLCILCRDKPETATHLFWE-------YYCEHTWRDHSTGRLEDLYIKKWMIIC----------------WHIWAHRNAVFHSNQKPDPVH
        N   R ++ + +C +C  + E   H           + C H     S      +  + W+  C                W  W  RN + H    P P  
Subjt:  NLINRGMDINPLCILCRDKPETATHLFWE-------YYCEHTWRDHSTGRLEDLYIKKWMIIC----------------WHIWAHRNAVFHSNQKPDPVH

Query:  LKQKITTSMEELI----QVEDTDLEAGRSM---------PSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRW
          Q+   S  +L+    Q    DL  G+ +         P    +      W  P  G  KLN D S+  + G+GGLG +LR   G  +    K + R  
Subjt:  LKQKITTSMEELI----QVEDTDLEAGRSM---------PSTTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRW

Query:  NVNWLESAAVIEGIR-AIPSVSPSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMA
        N    E  A +EG++ AI      +Q+E D   VV+LL G   DF+ ++  I +A+ L+    V SI  + R  N ++H+LA+ A
Subjt:  NVNWLESAAVIEGIR-AIPSVSPSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.4e-0530.17Show/hide
Query:  DEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFW-KTQVPPKIKICGWKLYNNILPTRANLINRGMDINPLCILCRDKPETATHLFW
        D  IW  D     ++ S  +  + +   +         I   +K  W K  VP    IC W +  N L TR  L + G+ I  +C+LC    E+  HLF+
Subjt:  DEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFW-KTQVPPKIKICGWKLYNNILPTRANLINRGMDINPLCILCRDKPETATHLFW

Query:  EY-YCEHTWRDHSTGR
        E  +C   WR   TGR
Subjt:  EY-YCEHTWRDHSTGR

AT3G09510.1 Ribonuclease H-like superfamily protein4.9e-2023.86Show/hide
Query:  WNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWKLYNNILPTRA
        W++S + +   ++D   I  I L  + + D+IIW+ ++ G ++VRS Y L       +  +++      +L    W   + PK+K   W+  +  L T  
Subjt:  WNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWKLYNNILPTRA

Query:  NLINRGMDINPLCILCRDKPETATH-LFWEYYCEHTWR--DHSTGR-----------------------LEDLY--IKKWMIICWHIWAHRNAVFHSNQK
         L  RGM I+P C  C  + E+  H LF   +    WR  D S  R                       + D +  +  W+I  W IW  RN V  +  +
Subjt:  NLINRGMDINPLCILCRDKPETATH-LFWEYYCEHTWR--DHSTGR-----------------------LEDLY--IKKWMIICWHIWAHRNAVFHSNQK

Query:  PDPVHLKQKITTSMEELIQVEDTDLEAGRSMPS-TTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRWNVNWLES
          P   K  ++   E    +  T  ++ +  PS T  I  +   WR P     K N DA +   +     GW++R   G+P++ G   +    N    E+
Subjt:  PDPVHLKQKITTSMEELIQVEDTDLEAGRSMPS-TTAIPPSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRWNVNWLES

Query:  AAVIEGIRAI-PSVSPSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFPSW
         A++  ++         V +E D   ++ L++G +   + ++  +ED     +       G + R  N LAH LA   C  +   S   S P W
Subjt:  AAVIEGIRAI-PSVSPSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFPSW

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.2e-0745.28Show/hide
Query:  WKTQVPPKIKICGWKLYNNILPTRANLINRGMDINPLCILCRDKPETATHLFW
        W  ++ PKIK+  WK  NN LP  A L++R + I P C  CRD  ET TH+ +
Subjt:  WKTQVPPKIKICGWKLYNNILPTRANLINRGMDINPLCILCRDKPETATHLFW

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.8e-0525Show/hide
Query:  KMFWKTQVPPKIKICGWKLYNNILPTRANLINRGMDINPLCILCRDKPETATHLF---------WEYYCE-------------HTW------RDHSTGRL
        K+ W  +  P+  +  W  +   LPTR  L   GM+I    +LC +  ET  HLF         WE++                +W      R HST  L
Subjt:  KMFWKTQVPPKIKICGWKLYNNILPTRANLINRGMDINPLCILCRDKPETATHLF---------WEYYCE-------------HTW------RDHSTGRL

Query:  EDLYIKKWMIICWHIWAHRNAVFHSNQKPDPVHLKQKITTSM-EELIQVEDTDLEA
        + L         +H+W  RNA   ++       L+  I  +M   L+     DL +
Subjt:  EDLYIKKWMIICWHIWAHRNAVFHSNQKPDPVHLKQKITTSM-EELIQVEDTDLEA

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.9e-0924.15Show/hide
Query:  HSTGRLEDL--YIKKWMIICWHIWAHRNAVFHSNQKPDPVHLKQKITTSMEELI----QVEDTDLEAGRSMPSTTAIPPSNSGWRPPSTGVWKLNCDASW
        H+  R++ +  ++  W++  W IW   N +  +       H + K  T++E  +    +  D  +   +   +  A P  N+ W PP     K N DAS 
Subjt:  HSTGRLEDL--YIKKWMIICWHIWAHRNAVFHSNQKPDPVHLKQKITTSMEELI----QVEDTDLEAGRSMPSTTAIPPSNSGWRPPSTGVWKLNCDASW

Query:  SETRGRGGLGWVLRRWDGSPVTAGFKVINRRWNVNWLESAAVIEGIRAIPSVS-PSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIG
         E     GLGW+LR   G+ +  G      R      E + +I  I+A        V  E D+  + R+++ ++ +   +  F++  ++ I         
Subjt:  SETRGRGGLGWVLRRWDGSPVTAGFKVINRRWNVNWLESAAVIEGIRAIPSVS-PSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKALISLRNVASIG

Query:  HVSRCHNYLAHYLAHMACDTNASDSWFNSFPSWFLS
           R  N  A +LA  A   N   S F+S P +FLS
Subjt:  HVSRCHNYLAHYLAHMACDTNASDSWFNSFPSWFLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAACTAATGCTTCCTACCAGAGTATGGAACGAGTCATTAGTGAAAGAGGCTTTTGTAGAGAATGATGCAAATACTATTCTGAGCATCCCGCTGAATAATACAAA
TAGGATGGATGAGATTATTTGGCATTTGGATTCGAAGGGGATTTTCTCGGTGAGAAGCGCCTATCGGTTGGGTGTCCAAATCCAACAAATGTCAGAGGCTTCAGTTTCAA
ACTATCAGTGTATCGAGAACCTTTGGAAAATGTTTTGGAAAACACAAGTTCCCCCTAAAATAAAGATCTGCGGTTGGAAGCTATACAATAATATTCTCCCGACAAGAGCG
AATCTAATAAACCGTGGCATGGATATTAACCCTTTATGTATTCTTTGTAGGGATAAGCCGGAGACTGCCACGCATCTATTCTGGGAGTATTACTGTGAGCATACTTGGAG
GGATCACTCAACAGGGCGTTTGGAGGATTTATACATCAAAAAATGGATGATTATTTGTTGGCACATTTGGGCTCACCGTAATGCAGTTTTTCACTCAAACCAGAAGCCAG
ATCCAGTTCATTTAAAGCAGAAGATCACCACATCTATGGAAGAATTAATTCAAGTCGAAGATACTGACCTGGAAGCCGGCCGGTCGATGCCATCCACTACTGCAATTCCC
CCTTCGAACTCAGGTTGGCGGCCACCGTCGACGGGAGTCTGGAAGCTAAACTGTGATGCTTCGTGGAGTGAGACGAGGGGAAGGGGCGGGTTAGGCTGGGTTCTCCGTCG
CTGGGACGGTTCGCCGGTGACTGCAGGGTTCAAGGTGATCAACCGTCGATGGAACGTCAATTGGCTCGAATCGGCAGCTGTGATTGAAGGAATTCGTGCCATTCCGTCTG
TCTCCCCGAGCGTGCAGATCGAAATCGACTCCCTCTACGTTGTTCGTCTACTTCACGGTGAAAATGAGGACTTCACGGAGATTTCTGGTTTTATTGAAGATGCTAAAGCC
CTGATATCATTAAGGAATGTGGCTTCTATTGGGCATGTGTCAAGATGTCATAACTATTTGGCCCATTATTTGGCCCATATGGCTTGTGATACTAATGCCTCTGATAGTTG
GTTTAATTCTTTTCCATCTTGGTTCTTGTCCCTTAATAATGTGGATATTGGTCACACTAGTGGGGGTTCCTGTCTCACAGATGGATCGGAGCACAATGTGATTGCTCATA
ATTTAGCCCGTGAGGGGCTTAGAGGTCAGCCAAATCTTTGGACGGGCGAGCTTAGAGGTCAACCAAATCTTTGGATTTGGGATGTTCCAAATTGGATCCAAGATCATGCT
CGTAGAGAGCTTTCTCTGTTTGTAACCGACAATATGATTATTTTTGTTGTTGTCTATGCGACAAGGCCAATGAATCTCAAGCCCATTTGTTCAACAGTTGTGACTTTGCT
GCATCCTTCTAGAATCATCTCCAACACGCTTTTGGGTGGCAATTTGCTCGTCCGGCAATGGATCTGTAGATGGAGTTGTCGTGGTGAAAGAGTTGCGCTGAAGAAGATGA
TTGCATGGAAGTGCGAAACTCGTCAAATAATGCTTCTACTGTTGATGGAGAGGTGGTCGATTGCCATAGTTGTTGACGAGGAATCTACTGCAGGGAGGGAATGTTGGGCA
AATAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCAACTAATGCTTCCTACCAGAGTATGGAACGAGTCATTAGTGAAAGAGGCTTTTGTAGAGAATGATGCAAATACTATTCTGAGCATCCCGCTGAATAATACAAA
TAGGATGGATGAGATTATTTGGCATTTGGATTCGAAGGGGATTTTCTCGGTGAGAAGCGCCTATCGGTTGGGTGTCCAAATCCAACAAATGTCAGAGGCTTCAGTTTCAA
ACTATCAGTGTATCGAGAACCTTTGGAAAATGTTTTGGAAAACACAAGTTCCCCCTAAAATAAAGATCTGCGGTTGGAAGCTATACAATAATATTCTCCCGACAAGAGCG
AATCTAATAAACCGTGGCATGGATATTAACCCTTTATGTATTCTTTGTAGGGATAAGCCGGAGACTGCCACGCATCTATTCTGGGAGTATTACTGTGAGCATACTTGGAG
GGATCACTCAACAGGGCGTTTGGAGGATTTATACATCAAAAAATGGATGATTATTTGTTGGCACATTTGGGCTCACCGTAATGCAGTTTTTCACTCAAACCAGAAGCCAG
ATCCAGTTCATTTAAAGCAGAAGATCACCACATCTATGGAAGAATTAATTCAAGTCGAAGATACTGACCTGGAAGCCGGCCGGTCGATGCCATCCACTACTGCAATTCCC
CCTTCGAACTCAGGTTGGCGGCCACCGTCGACGGGAGTCTGGAAGCTAAACTGTGATGCTTCGTGGAGTGAGACGAGGGGAAGGGGCGGGTTAGGCTGGGTTCTCCGTCG
CTGGGACGGTTCGCCGGTGACTGCAGGGTTCAAGGTGATCAACCGTCGATGGAACGTCAATTGGCTCGAATCGGCAGCTGTGATTGAAGGAATTCGTGCCATTCCGTCTG
TCTCCCCGAGCGTGCAGATCGAAATCGACTCCCTCTACGTTGTTCGTCTACTTCACGGTGAAAATGAGGACTTCACGGAGATTTCTGGTTTTATTGAAGATGCTAAAGCC
CTGATATCATTAAGGAATGTGGCTTCTATTGGGCATGTGTCAAGATGTCATAACTATTTGGCCCATTATTTGGCCCATATGGCTTGTGATACTAATGCCTCTGATAGTTG
GTTTAATTCTTTTCCATCTTGGTTCTTGTCCCTTAATAATGTGGATATTGGTCACACTAGTGGGGGTTCCTGTCTCACAGATGGATCGGAGCACAATGTGATTGCTCATA
ATTTAGCCCGTGAGGGGCTTAGAGGTCAGCCAAATCTTTGGACGGGCGAGCTTAGAGGTCAACCAAATCTTTGGATTTGGGATGTTCCAAATTGGATCCAAGATCATGCT
CGTAGAGAGCTTTCTCTGTTTGTAACCGACAATATGATTATTTTTGTTGTTGTCTATGCGACAAGGCCAATGAATCTCAAGCCCATTTGTTCAACAGTTGTGACTTTGCT
GCATCCTTCTAGAATCATCTCCAACACGCTTTTGGGTGGCAATTTGCTCGTCCGGCAATGGATCTGTAGATGGAGTTGTCGTGGTGAAAGAGTTGCGCTGAAGAAGATGA
TTGCATGGAAGTGCGAAACTCGTCAAATAATGCTTCTACTGTTGATGGAGAGGTGGTCGATTGCCATAGTTGTTGACGAGGAATCTACTGCAGGGAGGGAATGTTGGGCA
AATAAGTAG
Protein sequenceShow/hide protein sequence
MAQLMLPTRVWNESLVKEAFVENDANTILSIPLNNTNRMDEIIWHLDSKGIFSVRSAYRLGVQIQQMSEASVSNYQCIENLWKMFWKTQVPPKIKICGWKLYNNILPTRA
NLINRGMDINPLCILCRDKPETATHLFWEYYCEHTWRDHSTGRLEDLYIKKWMIICWHIWAHRNAVFHSNQKPDPVHLKQKITTSMEELIQVEDTDLEAGRSMPSTTAIP
PSNSGWRPPSTGVWKLNCDASWSETRGRGGLGWVLRRWDGSPVTAGFKVINRRWNVNWLESAAVIEGIRAIPSVSPSVQIEIDSLYVVRLLHGENEDFTEISGFIEDAKA
LISLRNVASIGHVSRCHNYLAHYLAHMACDTNASDSWFNSFPSWFLSLNNVDIGHTSGGSCLTDGSEHNVIAHNLAREGLRGQPNLWTGELRGQPNLWIWDVPNWIQDHA
RRELSLFVTDNMIIFVVVYATRPMNLKPICSTVVTLLHPSRIISNTLLGGNLLVRQWICRWSCRGERVALKKMIAWKCETRQIMLLLLMERWSIAIVVDEESTAGRECWA
NK