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Lag0027681 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027681
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:3428612..3428968
RNA-Seq ExpressionLag0027681
SyntenyLag0027681
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006487889.1 uncharacterized protein LOC102617714 [Citrus sinensis]5.3e-1945.45Show/hide
Query:  KIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKIRGL
        K +E L  L  WS++ +GG  +     + K  ++  S S +  G  L+K E  ++N+L+D+EI+WKQR+R DWL  GD+NTK+FHA+AS R+K N+I G+
Subjt:  KIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKIRGL

Query:  LDEFGVWQED
        LDE G W ED
Subjt:  LDEFGVWQED

XP_015382226.1 uncharacterized protein LOC107175329, partial [Citrus sinensis]5.3e-1945.45Show/hide
Query:  KIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKIRGL
        K +E L  L  WS++ +GG  +     + K  ++  S S +  G  L+K E  ++N+L+D+EI+WKQR+R DWL  GD+NTK+FHA+AS R+K N+I G+
Subjt:  KIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKIRGL

Query:  LDEFGVWQED
        LDE G W ED
Subjt:  LDEFGVWQED

XP_015384098.1 uncharacterized protein LOC107176315 [Citrus sinensis]1.6e-1546.15Show/hide
Query:  RLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHD-GHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKIRGLLDEFGV
        RL  WS+  + GS +  + R  K++  +    +H+D G   R+ E  + NLL D+E+YWKQR+R DWL  GD+NTK+FHA+AS RK+ NKI G+ D  G 
Subjt:  RLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHD-GHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKIRGLLDEFGV

Query:  WQED
        W ED
Subjt:  WQED

XP_015388578.1 uncharacterized protein LOC107178209 [Citrus sinensis]3.2e-1641.03Show/hide
Query:  KECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSE--------SDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKV
        K  L +L  WS++ +GG        +EK++N+L  E          H   + ++K E+ + N+L ++EIYW+ RAR DWL   DRNTK+FH++A+ RK+ 
Subjt:  KECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSE--------SDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKV

Query:  NKIRGLLDEFGVWQEDG
        NKI G+ D+ GVW EDG
Subjt:  NKIRGLLDEFGVWQEDG

XP_030929385.1 uncharacterized protein LOC115955407 [Quercus lobata]1.6e-1539.66Show/hide
Query:  MVGKIKECLNRLHHWSRERYGGSIRGAIARKEKEIN-LLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNK
        MV  +K+C + L  W+ E + G +   I  K + +N L+L   D  +G+ + K  K++ +LLE +EI W+QR++  W+  GDRNT++FH +AS+RKK N 
Subjt:  MVGKIKECLNRLHHWSRERYGGSIRGAIARKEKEIN-LLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNK

Query:  IRGLLDEFGVWQEDGV
        I  +LDE G+W+E  +
Subjt:  IRGLLDEFGVWQEDGV

TrEMBL top hitse value%identityAlignment
A0A2N9GF83 CCHC-type domain-containing protein7.0e-1742.73Show/hide
Query:  KIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKIRGL
        K+K C   L  WS+ R+ GS+  +I  K  ++  LL++    D   + + + DL  LLE +E+YW+QR+R  W+  GD+NTK+FHAQ S+R++ NK++GL
Subjt:  KIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKIRGL

Query:  LDEFGVWQED
         DE GVW  D
Subjt:  LDEFGVWQED

A0A2N9GPZ7 Reverse transcriptase domain-containing protein1.4e-1742.48Show/hide
Query:  MVGKIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKI
        +V K+K C   L  WSRER+ GS+  +I RK +++  L++E+       + + + DL  LLE +EI+W+QR+R  W++ GD+NTK+FHAQ ++R++ N I
Subjt:  MVGKIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKI

Query:  RGLLDEFGVWQED
         GL D  GVWQ +
Subjt:  RGLLDEFGVWQED

A0A2N9IDC0 Uncharacterized protein2.0e-1639.82Show/hide
Query:  MVGKIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKI
        ++ K+K C   L  WSR ++ GS   +I  K + +  L+ E    D   + + + +L  LLE +EI+W+QR+R  W++ GD+NTK+FHAQ + R+++N I
Subjt:  MVGKIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKI

Query:  RGLLDEFGVWQED
        +GL D  GVWQ D
Subjt:  RGLLDEFGVWQED

A0A2N9IPS8 Reverse transcriptase domain-containing protein1.4e-1742.48Show/hide
Query:  MVGKIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKI
        +V K+K C   L  WSRER+ GS+  +I RK +++  L++E+       + + + DL  LLE +EI+W+QR+R  W++ GD+NTK+FHAQ ++R++ N I
Subjt:  MVGKIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKI

Query:  RGLLDEFGVWQED
         GL D  GVWQ +
Subjt:  RGLLDEFGVWQED

A0A803PWX1 Uncharacterized protein1.2e-1641.82Show/hide
Query:  KIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKIRGL
        KI +C   L  W++++    +   IA+ +K ++ L  +        ++  E  L  LLE DE YW+QR+R  WL WGDRNTK+FH +AS R+K N+I+GL
Subjt:  KIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKIRGL

Query:  LDEFGVWQED
         D+ GVWQ+D
Subjt:  LDEFGVWQED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGAAAAATTAAGGAGTGTCTTAATCGGTTACATCATTGGAGTAGAGAGAGATATGGAGGGTCCATTAGAGGGGCAATTGCGCGAAAAGAGAAGGAAATTAATCT
GCTTCTCTCGGAATCTGATCATCATGATGGACATGTTCTTAGGAAAAAGGAAAAGGACTTGGAGAATTTATTAGAGGATGATGAGATATACTGGAAACAGAGAGCTCGAG
AAGATTGGTTAAACTGGGGGGACAGGAACACAAAGTGGTTTCATGCGCAGGCCAGCAAGAGAAAGAAAGTTAATAAAATTCGAGGTCTTCTGGATGAGTTTGGAGTTTGG
CAAGAAGATGGAGTATGTGGCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGAAAAATTAAGGAGTGTCTTAATCGGTTACATCATTGGAGTAGAGAGAGATATGGAGGGTCCATTAGAGGGGCAATTGCGCGAAAAGAGAAGGAAATTAATCT
GCTTCTCTCGGAATCTGATCATCATGATGGACATGTTCTTAGGAAAAAGGAAAAGGACTTGGAGAATTTATTAGAGGATGATGAGATATACTGGAAACAGAGAGCTCGAG
AAGATTGGTTAAACTGGGGGGACAGGAACACAAAGTGGTTTCATGCGCAGGCCAGCAAGAGAAAGAAAGTTAATAAAATTCGAGGTCTTCTGGATGAGTTTGGAGTTTGG
CAAGAAGATGGAGTATGTGGCAAATGA
Protein sequenceShow/hide protein sequence
MVGKIKECLNRLHHWSRERYGGSIRGAIARKEKEINLLLSESDHHDGHVLRKKEKDLENLLEDDEIYWKQRAREDWLNWGDRNTKWFHAQASKRKKVNKIRGLLDEFGVW
QEDGVCGK