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Lag0027684 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027684
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr8:3477697..3480131
RNA-Seq ExpressionLag0027684
SyntenyLag0027684
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY85402.1 hypothetical protein Acr_04g0001400 [Actinidia rufa]3.0e-0542.45Show/hide
Query:  APSNPSIPASFPYPPAPQSG-LPFYSGFNSATPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDGTPV-PMRFLDSAQTQQ
        A S     ++ P PP P S  LP  S  N    +  T+P P++   P +  PL VKL + NY++WK QLLN +IA  +E F+DG+ V P RFLD    QQ
Subjt:  APSNPSIPASFPYPPAPQSG-LPFYSGFNSATPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDGTPV-PMRFLDSAQTQQ

Query:  QTNLVF
        Q+N  F
Subjt:  QTNLVF

RVW43596.1 hypothetical protein CK203_097540 [Vitis vinifera]1.0e-0560Show/hide
Query:  TPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDGT-PVPMRFLD
        TPS S +P +  PL VKL N NYL+WKNQLLN IIA  ++ FIDG+ P P RFL+
Subjt:  TPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDGT-PVPMRFLD

RVW56403.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]2.4e-0752.94Show/hide
Query:  TPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDG-TPVPMRFLDSAQTQ
        TP+F  +P  + + YP L+ PL +KL  +N  LWKNQLLN IIA  +E FI+G TP+P +FLD AQ Q
Subjt:  TPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDG-TPVPMRFLDSAQTQ

RVX22862.1 hypothetical protein CK203_008411 [Vitis vinifera]1.2e-0651.52Show/hide
Query:  TPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDG-TPVPMRFLDSAQ
        TP+F  +P  + + YP L+ PL +KL  +N  LWKNQL+N IIA  +E FI+G TP+P +FLD AQ
Subjt:  TPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDG-TPVPMRFLDSAQ

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]6.0e-0650Show/hide
Query:  FNSATPVF-PTAPTP-SLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDGTPV-PMRFLDSAQTQ
        F   TP F    P P S +P+P L  PLNVKL ++N+LLWKNQLLN +IA  +  ++DGT + P +FLD  Q Q
Subjt:  FNSATPVF-PTAPTP-SLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDGTPV-PMRFLDSAQTQ

TrEMBL top hitse value%identityAlignment
A0A438E760 Uncharacterized protein5.0e-0660Show/hide
Query:  TPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDGT-PVPMRFLD
        TPS S +P +  PL VKL N NYL+WKNQLLN IIA  ++ FIDG+ P P RFL+
Subjt:  TPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDGT-PVPMRFLD

A0A438F8X3 Retrovirus-related Pol polyprotein from transposon RE11.2e-0752.94Show/hide
Query:  TPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDG-TPVPMRFLDSAQTQ
        TP+F  +P  + + YP L+ PL +KL  +N  LWKNQLLN IIA  +E FI+G TP+P +FLD AQ Q
Subjt:  TPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDG-TPVPMRFLDSAQTQ

A0A438KNU0 Uncharacterized protein5.8e-0751.52Show/hide
Query:  TPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDG-TPVPMRFLDSAQ
        TP+F  +P  + + YP L+ PL +KL  +N  LWKNQL+N IIA  +E FI+G TP+P +FLD AQ
Subjt:  TPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDG-TPVPMRFLDSAQ

A0A6J1DQX7 uncharacterized protein LOC1110223152.9e-0650Show/hide
Query:  FNSATPVF-PTAPTP-SLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDGTPV-PMRFLDSAQTQ
        F   TP F    P P S +P+P L  PLNVKL ++N+LLWKNQLLN +IA  +  ++DGT + P +FLD  Q Q
Subjt:  FNSATPVF-PTAPTP-SLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDGTPV-PMRFLDSAQTQ

A0A7J0EGI5 Uncharacterized protein1.4e-0542.45Show/hide
Query:  APSNPSIPASFPYPPAPQSG-LPFYSGFNSATPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDGTPV-PMRFLDSAQTQQ
        A S     ++ P PP P S  LP  S  N    +  T+P P++   P +  PL VKL + NY++WK QLLN +IA  +E F+DG+ V P RFLD    QQ
Subjt:  APSNPSIPASFPYPPAPQSG-LPFYSGFNSATPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIAFDMESFIDGTPV-PMRFLDSAQTQQ

Query:  QTNLVF
        Q+N  F
Subjt:  QTNLVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAGACCCACCCTAATACTTCAATCCCCATTTCTTCTCCTATTACTCTCCCTCTAAACTCGGTGATTCCCCCTTTTCGCCCTCAACAAGCCCCTTCAAAT
CCTTCAATCCCTGCTAGTTTCCCTTACCCTCCAGCACCACAGTCCGGCTTACCATTTTATTCGGGGTTTAATTCCGCCACCCCTGTTTTTCCCACAGCTCCTACA
CCCTCCTTATCTCCATATCCAATCTTAACCCCTCCCTTGAATGTCAAGCTCACCAACTCCAACTACCTCTTATGGAAGAATCAGTTGCTGAATCACATAATTGCG
TTCGATATGGAGAGTTTCATCGATGGTACCCCTGTGCCTATGCGGTTTCTTGACTCTGCTCAAACTCAACAGCAAACGAACCTTGTCTTCGTTGGAAAAACAGCA
CGAACACCACCACGAGGATTCACCGGTATTCTCGAACAGGATCTTACGTTGGACGCTTGTGGGAGCAAAAACTCTAAGGATTTTTCCTGGAAGAAGAACTCTGTA
TTCTCAGAGAGAGTGCAGAACGAGAGAGAGGATGAGAGGGAGCGTGAGAGGCGTGAGACTTGGGCTATTCTGCAACTGAATGAAGACCAAGATAATAAAGGAATA
GTTAAGCCACCTCACGCATCATCAGAACCACAACTGCACTCTTCTCACTACAGATATATTTCTGTGTCCACGGATATTGACCGTCAACAGCAAGTTAGCCCTTCA
CGTGTGTTCGTACCCCAGCTAGGTCAAATTACCGTTTTACCCCTGGGCTACCTCTTGGTCCTTAAGTACCAGTGCTCCTCTAATGAACAACCTGTTTGTGGTCCA
ACCAGCAAACAGAAATCCCTCTCGTGCCATAAAGAGGGTAGGGCCCATTGTTCAAGACCCGGAGACACCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAGACCCACCCTAATACTTCAATCCCCATTTCTTCTCCTATTACTCTCCCTCTAAACTCGGTGATTCCCCCTTTTCGCCCTCAACAAGCCCCTTCAAAT
CCTTCAATCCCTGCTAGTTTCCCTTACCCTCCAGCACCACAGTCCGGCTTACCATTTTATTCGGGGTTTAATTCCGCCACCCCTGTTTTTCCCACAGCTCCTACA
CCCTCCTTATCTCCATATCCAATCTTAACCCCTCCCTTGAATGTCAAGCTCACCAACTCCAACTACCTCTTATGGAAGAATCAGTTGCTGAATCACATAATTGCG
TTCGATATGGAGAGTTTCATCGATGGTACCCCTGTGCCTATGCGGTTTCTTGACTCTGCTCAAACTCAACAGCAAACGAACCTTGTCTTCGTTGGAAAAACAGCA
CGAACACCACCACGAGGATTCACCGGTATTCTCGAACAGGATCTTACGTTGGACGCTTGTGGGAGCAAAAACTCTAAGGATTTTTCCTGGAAGAAGAACTCTGTA
TTCTCAGAGAGAGTGCAGAACGAGAGAGAGGATGAGAGGGAGCGTGAGAGGCGTGAGACTTGGGCTATTCTGCAACTGAATGAAGACCAAGATAATAAAGGAATA
GTTAAGCCACCTCACGCATCATCAGAACCACAACTGCACTCTTCTCACTACAGATATATTTCTGTGTCCACGGATATTGACCGTCAACAGCAAGTTAGCCCTTCA
CGTGTGTTCGTACCCCAGCTAGGTCAAATTACCGTTTTACCCCTGGGCTACCTCTTGGTCCTTAAGTACCAGTGCTCCTCTAATGAACAACCTGTTTGTGGTCCA
ACCAGCAAACAGAAATCCCTCTCGTGCCATAAAGAGGGTAGGGCCCATTGTTCAAGACCCGGAGACACCACTTAA
Protein sequenceShow/hide protein sequence
MTETHPNTSIPISSPITLPLNSVIPPFRPQQAPSNPSIPASFPYPPAPQSGLPFYSGFNSATPVFPTAPTPSLSPYPILTPPLNVKLTNSNYLLWKNQLLNHIIA
FDMESFIDGTPVPMRFLDSAQTQQQTNLVFVGKTARTPPRGFTGILEQDLTLDACGSKNSKDFSWKKNSVFSERVQNEREDERERERRETWAILQLNEDQDNKGI
VKPPHASSEPQLHSSHYRYISVSTDIDRQQQVSPSRVFVPQLGQITVLPLGYLLVLKYQCSSNEQPVCGPTSKQKSLSCHKEGRAHCSRPGDTT