; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027685 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027685
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:3490567..3492229
RNA-Seq ExpressionLag0027685
SyntenyLag0027685
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024200181.1 uncharacterized protein LOC112203446 [Rosa chinensis]4.4e-3632.58Show/hide
Query:  PFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD-----------------AFVSGR
        P+   E+  AL Q++P  +P PDG+   F++ +W  +G DV+ +  S L      + +N T I LIPK+ +P  ++D                 AFV GR
Subjt:  PFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD-----------------AFVSGR

Query:  SVVENAILGFECIHALKLRRRGKVGWAALKFDMSLV--------------IHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQ
         +++N ++  E  H +  +R G  G+ ALK D+S                + ++ + Y  ASGQ +NF K  V FS N  + +Q  +S    V VV  H+
Subjt:  SVVENAILGFECIHALKLRRRGKVGWAALKFDMSLV--------------IHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQ

Query:  RYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAVGTGHPMLHHELLSFTQ
        +YLGLP ++ + + ST Q++KDR+ K+L GW+GKL S  GK++LI+ V    P     +   T+
Subjt:  RYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAVGTGHPMLHHELLSFTQ

XP_025703475.1 uncharacterized protein LOC112805291 [Arachis hypogaea]3.3e-3936.86Show/hide
Query:  DKPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIV----------LIPKVTSPRKITDAFVSGRSVVEN
        D+PF   E+  ALKQ+HP +AP PDG+   FY+K W +VG D+    L+ILNH+  P P+N T I           ++P +    +   AFV  R + +N
Subjt:  DKPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIV----------LIPKVTSPRKITDAFVSGRSVVEN

Query:  AILGFECIHALKLRRRGKVGWAALKFDMSLVIHNI--LKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTL
         ++ FE  H +K +  G+ G+  +K DM+     I    L E ASGQ +N DK  ++FS N     Q+ +     +  V  H +YLGLP FM K++    
Subjt:  AILGFECIHALKLRRRGKVGWAALKFDMSLVIHNI--LKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTL

Query:  QFLKDRIWKQLQGWRGKLFSAGGKEVLIKAVGTGHP
         F+++R+WK+L+GW+ K  S  GKE LIK++    P
Subjt:  QFLKDRIWKQLQGWRGKLFSAGGKEVLIKAVGTGHP

XP_030483228.1 uncharacterized protein LOC115699823 [Cannabis sativa]8.4e-3531.56Show/hide
Query:  KPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTS--------PRKITDAFVSGRSVVENAIL
        + F   ++  ALK ++ + +P  DG++  FY+ +W ++G  V  + L +LN   SP  LN TLI LIPK           P K   AF+  R + +N ++
Subjt:  KPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTS--------PRKITDAFVSGRSVVENAIL

Query:  GFECIHALKLRRRGKVGWAALKFDMSL--------------------------------------------------------VIHNILKLYEEASGQTV
         FE +H LKL+ RG+ G++ALK DMS                                                          I  +L  Y  ASGQ +
Subjt:  GFECIHALKLRRRGKVGWAALKFDMSL--------------------------------------------------------VIHNILKLYEEASGQTV

Query:  NFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAV
        N DK +++FSPN+  + + S  ++  +P+  CH+ YL LPA+  +++      +K+RIWK L  W  K+FS GGKEVL+KAV
Subjt:  NFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAV

XP_030969753.1 uncharacterized protein LOC115990032 [Quercus lobata]1.7e-3531.17Show/hide
Query:  KPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD----------------------
        + F  +E+ LALKQ+HPN  P  DGL   FY+K W L G  V  + L  LNH + P   NDT IVLIPKV +PRKIT+                      
Subjt:  KPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD----------------------

Query:  -------------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDMSLV---------------------------------------------
                     AF  GR + +N ++ FE +H +  ++ G+VG  ALK DMS                                               
Subjt:  -------------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDMSLV---------------------------------------------

Query:  ---------------------IHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQ
                             +  I  +YE ASGQ +N  K  + F+ N+  +IQ  + S F   V+  H++YLGLP+ + +++ +T   LKD++ K+L 
Subjt:  ---------------------IHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQ

Query:  GWRGKLFSAGGKEVLIKAVGTGHP
        GW+ KL S  GKE+LIKAVG   P
Subjt:  GWRGKLFSAGGKEVLIKAVGTGHP

XP_030970335.1 uncharacterized protein LOC115990665 [Quercus lobata]1.5e-3632.67Show/hide
Query:  KPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD----------------------
        + F  +E++LAL Q+ P  AP PDG++  FY+  W +VG DV    L+ LN  V P  LN T I LIPKV  P+K+ D                      
Subjt:  KPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD----------------------

Query:  -------------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDMSLV--------------------------------------IHNILKL
                     AF+SGR + +N ++ FE +H LK +  GKVG  ALK DMS                                        I +IL +
Subjt:  -------------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDMSLV--------------------------------------IHNILKL

Query:  YEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAVGTGHPMLHH
        YE  SGQ +N +K  + FS N+   +Q  +  +  VP +   ++YLGLPA + + +  +  ++K+R+WK+LQGW+ KL S  G+EVLIK+  +G     H
Subjt:  YEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAVGTGHPMLHH

TrEMBL top hitse value%identityAlignment
A0A2N9ED23 Uncharacterized protein4.8e-3634.66Show/hide
Query:  FVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD------------------------
        F   ++  A+KQ+ P +AP PDG+   FY+ +W + G DVI + LS LN    P  LN + + LIPK  SP K+T+                        
Subjt:  FVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD------------------------

Query:  -----------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDMSLVIHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVG
                   AFV GR + +N ++ FE +H +  +R GKVG  ALK DMS       K Y+ ASGQ +N  K  + FS N+  ++Q  L  +  VP + 
Subjt:  -----------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDMSLVIHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVG

Query:  CHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAV
         +++YLGLP+ + K +      +K+++W +++GW+ KL S  G+E+LIKAV
Subjt:  CHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAV

A0A2N9G219 RNase H domain-containing protein4.8e-3633.72Show/hide
Query:  PFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD-----------------------
        PF   E+ +A+KQ+ P +AP PDG+   FY+ +W +VG D+  + L  L        LN T + LIPK  SP  +T+                       
Subjt:  PFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD-----------------------

Query:  ------------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDMS---------LVIHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSL
                    AFV GR + +N ++ FE +H +  +R GKVG  ALK DMS          V   IL +YE+ASGQ +N  K  + FS N+  + Q  +
Subjt:  ------------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDMS---------LVIHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSL

Query:  SSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAV
          +  VP +  +++YLGLP+ + K + +    +K+R+W +++GW+ KL S  G+E+LIKAV
Subjt:  SSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAV

A0A2N9IXD3 Uncharacterized protein5.7e-3733.11Show/hide
Query:  KPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD----------------------
        + F+  E+E ALKQ+ P +AP PDGL   FY+K W +VGPDV    LS LN       +N T I LIPKV +P ++T+                      
Subjt:  KPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD----------------------

Query:  -------------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDM----SLV-----------------------------------------
                     AFV GR + +N ++ FE +H +   + GK G  ALK DM    SL+                                         
Subjt:  -------------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDM----SLV-----------------------------------------

Query:  --IHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAV
          +  IL LYE ASGQ VN DK  + FS  +  + Q+++     VP++  +++YLGLP+F+ KNR +    LK+R+W +L GW+ KL S  G+EVLIK+V
Subjt:  --IHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAV

Query:  GTGHP
            P
Subjt:  GTGHP

A0A803P621 Uncharacterized protein1.5e-3730.48Show/hide
Query:  NKSDKPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD------------------
        N   KPF P+E++ AL  +  +++P  DG++  FY++HW +VG  V  + L++LNH   P PLN T+I+LIPK   P  + D                  
Subjt:  NKSDKPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD------------------

Query:  -----------------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDMS-----------------------------------LVIHNILK
                         AF+  R + +N ++ FE IH +KLR  G  G AA+K DMS                                   L I  +  
Subjt:  -----------------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDMS-----------------------------------LVIHNILK

Query:  LYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAV
        +Y  ASGQT+N +K  ++FSPN+ L+ Q        + +  CH+ YLGLPA+  +++      +K+++W+ +  W  K+FS+GGKE+L++ V
Subjt:  LYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLIKAV

A0A803QBU0 Uncharacterized protein1.4e-3530Show/hide
Query:  FVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD------------------------
        F  AE++ ALK +  +++P  DG++  FY++HW +VG  V +  L ILN+   P  LN TLI LIPK+  P  + D                        
Subjt:  FVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITD------------------------

Query:  -----------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDMS-------------------------------------------------
                   AF++ R + +N ++ FE +HA+K +  GK G A+LK DMS                                                 
Subjt:  -----------AFVSGRSVVENAILGFECIHALKLRRRGKVGWAALKFDMS-------------------------------------------------

Query:  --------------------LVIHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQL
                            L I  +L +Y  ASGQ +N DK++++FSPN+ L+ Q        +P+  CH+RYLGLP++  +++      +K+RIWK +
Subjt:  --------------------LVIHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQL

Query:  QGWRGKLFSAGGKEVLIKAV
        Q W  KLFSAGG+EVL+KAV
Subjt:  QGWRGKLFSAGGKEVLIKAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.3e-0436.92Show/hide
Query:  EIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVT
        EI  A+  +  N+AP PD  T EF+ + WF+V    I +           +  N T I LIPKVT
Subjt:  EIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGAGTGATAAGCCATTTGTTCCTGCAGAGATTGAGTTGGCCCTCAAGCAAATTCACCCAAATAGAGCTCCCAGGCCAGATGGTTTGACTGGTGAGTTTTATCG
TAAGCATTGGTTCTTAGTTGGTCCTGATGTGATCCATAGTTGTTTGTCAATTTTGAATCACCAGGTCTCCCCTAGGCCTTTGAATGATACTCTGATTGTGTTGATTCCGA
AAGTGACCTCCCCCAGGAAGATTACTGATGCCTTTGTTTCAGGGCGGTCTGTTGTTGAAAATGCAATTTTGGGGTTTGAATGTATCCATGCCCTTAAACTCAGAAGAAGA
GGGAAAGTTGGGTGGGCAGCTTTGAAGTTTGACATGAGCCTTGTGATTCACAATATTCTGAAGTTGTATGAGGAGGCATCTGGACAAACTGTAAATTTTGATAAATTTAT
GGTAGCCTTTAGTCCGAACTCTGCTTTGTCTATCCAGTCTTCTTTGAGTAGTCTCTTTGTGGTTCCAGTGGTGGGGTGTCATCAGCGTTACTTGGGCCTCCCAGCCTTTA
TGCCTAAAAACAGGAATTCCACTTTGCAATTTCTTAAGGATCGAATCTGGAAGCAGTTACAAGGTTGGCGAGGTAAACTGTTTTCTGCAGGGGGAAAGGAGGTTTTAATC
AAAGCAGTGGGTACAGGCCATCCCATGTTACACCATGAATTGCTTTCGTTTACCCAAGAGTCTGATTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGAGTGATAAGCCATTTGTTCCTGCAGAGATTGAGTTGGCCCTCAAGCAAATTCACCCAAATAGAGCTCCCAGGCCAGATGGTTTGACTGGTGAGTTTTATCG
TAAGCATTGGTTCTTAGTTGGTCCTGATGTGATCCATAGTTGTTTGTCAATTTTGAATCACCAGGTCTCCCCTAGGCCTTTGAATGATACTCTGATTGTGTTGATTCCGA
AAGTGACCTCCCCCAGGAAGATTACTGATGCCTTTGTTTCAGGGCGGTCTGTTGTTGAAAATGCAATTTTGGGGTTTGAATGTATCCATGCCCTTAAACTCAGAAGAAGA
GGGAAAGTTGGGTGGGCAGCTTTGAAGTTTGACATGAGCCTTGTGATTCACAATATTCTGAAGTTGTATGAGGAGGCATCTGGACAAACTGTAAATTTTGATAAATTTAT
GGTAGCCTTTAGTCCGAACTCTGCTTTGTCTATCCAGTCTTCTTTGAGTAGTCTCTTTGTGGTTCCAGTGGTGGGGTGTCATCAGCGTTACTTGGGCCTCCCAGCCTTTA
TGCCTAAAAACAGGAATTCCACTTTGCAATTTCTTAAGGATCGAATCTGGAAGCAGTTACAAGGTTGGCGAGGTAAACTGTTTTCTGCAGGGGGAAAGGAGGTTTTAATC
AAAGCAGTGGGTACAGGCCATCCCATGTTACACCATGAATTGCTTTCGTTTACCCAAGAGTCTGATTCATGA
Protein sequenceShow/hide protein sequence
MNKSDKPFVPAEIELALKQIHPNRAPRPDGLTGEFYRKHWFLVGPDVIHSCLSILNHQVSPRPLNDTLIVLIPKVTSPRKITDAFVSGRSVVENAILGFECIHALKLRRR
GKVGWAALKFDMSLVIHNILKLYEEASGQTVNFDKFMVAFSPNSALSIQSSLSSLFVVPVVGCHQRYLGLPAFMPKNRNSTLQFLKDRIWKQLQGWRGKLFSAGGKEVLI
KAVGTGHPMLHHELLSFTQESDS