; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027696 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027696
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr8:3654654..3657088
RNA-Seq ExpressionLag0027696
SyntenyLag0027696
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EDO42419.1 predicted protein [Nematostella vectensis]1.2e-1725.06Show/hide
Query:  PKF-KGSHALASPQFLPPSSKVHTRFATVPSSKFEGSHAHRHSSFLQVRRFSRASPQFLPPSSKVHTRIATVPSSKFEGSHAHRHSSFLQVRRFTRASPQ
        PK+ +GS  L     LP   KVH R    P++  + +      S+  V ++++ S   LP   KVH R+A  P++ F+ +      S+  V ++T+ S  
Subjt:  PKF-KGSHALASPQFLPPSSKVHTRFATVPSSKFEGSHAHRHSSFLQVRRFSRASPQFLPPSSKVHTRIATVPSSKFEGSHAHRHSSFLQVRRFTRASPQ

Query:  FLPPSSKVHTRFATVPSSKFEGSHALRHSSFLQVRRFTCASPQFLPPSSKVLTRFATVPSSKFEGSHALRHSSFLQVRRFSRARRFSRASPQFLPPSSKV
         LP   KVH R    P++  + +      S+  V ++T  S   LP   KV  R    P++  + +      S+  V ++++  R        LP   KV
Subjt:  FLPPSSKVHTRFATVPSSKFEGSHALRHSSFLQVRRFTCASPQFLPPSSKVLTRFATVPSSKFEGSHALRHSSFLQVRRFSRARRFSRASPQFLPPSSKV

Query:  HTRIATVPSSKFEGSH-AHCHSSFHSSFLQVRRFTRASPQFLPPSSKVLTRIATVPSSKFEGSHALRHSSFLQVRRFSRASRASPQFLPPSSKVHTRFAT
        H R+   P++  + +  AH +     S+  V ++T+ S   LP   KV  R+   P++  + +      S+  V ++++ SR     LP   KVH R   
Subjt:  HTRIATVPSSKFEGSH-AHCHSSFHSSFLQVRRFTRASPQFLPPSSKVLTRIATVPSSKFEGSHALRHSSFLQVRRFSRASRASPQFLPPSSKVHTRFAT

Query:  VPSSKFEGSHSKFEGSHAHRHSSFLQVRRFTRASPQFLPPSSKVHTPSSKVLTRIATVPSSKFEGSHALRHSSFLQVRRFTRASPQFLPPSSKVHTRFAT
         P++  + +        AH +S  L V ++T+ S   LP   KVH        R+   P++  + +   +  S+  V ++T+ S   LP   KVH R   
Subjt:  VPSSKFEGSHSKFEGSHAHRHSSFLQVRRFTRASPQFLPPSSKVHTPSSKVLTRIATVPSSKFEGSHALRHSSFLQVRRFTRASPQFLPPSSKVHTRFAT

Query:  VP--FLQ------------VRRFSRASPQFLPPSSKVLTCIATVPSS
         P  +LQ            V ++++ S   LP   KV   +   P++
Subjt:  VP--FLQ------------VRRFSRASPQFLPPSSKVLTCIATVPSS

KAA0036008.1 Retrotransposon gag protein [Cucumis melo var. makuwa]3.3e-1565.43Show/hide
Query:  MSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
        MST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M + + K F E N D K+HS VPSRMKRK SV I TEGSL
Subjt:  MSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL

KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.6e-1566.25Show/hide
Query:  STSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
        ST TR SAF+ LS+STSKK +PSTS FDRLK+ +DQ +R+M +L+VK F E N D K+HS VPSRMKRK SV I TEGSL
Subjt:  STSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.3e-1566.25Show/hide
Query:  STSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
        ST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I TEGSL
Subjt:  STSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL

KAA0050734.1 gag protease polyprotein [Cucumis melo var. makuwa]4.3e-1566.25Show/hide
Query:  STSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
        ST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I TEGSL
Subjt:  STSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL

TrEMBL top hitse value%identityAlignment
A0A5A7SZJ7 Retrotransposon gag protein1.6e-1565.43Show/hide
Query:  MSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
        MST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M + + K F E N D K+HS VPSRMKRK SV I TEGSL
Subjt:  MSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL

A0A5A7TGM1 Retrotransposon gag protein2.7e-1566.25Show/hide
Query:  STSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
        ST TR SAF+ LS+STSKK +PSTS FDRLK+ +DQ +R+M +L+VK F E N D K+HS VPSRMKRK SV I TEGSL
Subjt:  STSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL

A0A5A7TQ06 Retrotransposon gag protein2.1e-1566.25Show/hide
Query:  STSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
        ST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I TEGSL
Subjt:  STSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL

A0A5D3BBF9 Gag protease polyprotein2.1e-1566.25Show/hide
Query:  STSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
        ST  R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I TEGSL
Subjt:  STSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL

A7S1S7 Predicted protein5.8e-1825.06Show/hide
Query:  PKF-KGSHALASPQFLPPSSKVHTRFATVPSSKFEGSHAHRHSSFLQVRRFSRASPQFLPPSSKVHTRIATVPSSKFEGSHAHRHSSFLQVRRFTRASPQ
        PK+ +GS  L     LP   KVH R    P++  + +      S+  V ++++ S   LP   KVH R+A  P++ F+ +      S+  V ++T+ S  
Subjt:  PKF-KGSHALASPQFLPPSSKVHTRFATVPSSKFEGSHAHRHSSFLQVRRFSRASPQFLPPSSKVHTRIATVPSSKFEGSHAHRHSSFLQVRRFTRASPQ

Query:  FLPPSSKVHTRFATVPSSKFEGSHALRHSSFLQVRRFTCASPQFLPPSSKVLTRFATVPSSKFEGSHALRHSSFLQVRRFSRARRFSRASPQFLPPSSKV
         LP   KVH R    P++  + +      S+  V ++T  S   LP   KV  R    P++  + +      S+  V ++++  R        LP   KV
Subjt:  FLPPSSKVHTRFATVPSSKFEGSHALRHSSFLQVRRFTCASPQFLPPSSKVLTRFATVPSSKFEGSHALRHSSFLQVRRFSRARRFSRASPQFLPPSSKV

Query:  HTRIATVPSSKFEGSH-AHCHSSFHSSFLQVRRFTRASPQFLPPSSKVLTRIATVPSSKFEGSHALRHSSFLQVRRFSRASRASPQFLPPSSKVHTRFAT
        H R+   P++  + +  AH +     S+  V ++T+ S   LP   KV  R+   P++  + +      S+  V ++++ SR     LP   KVH R   
Subjt:  HTRIATVPSSKFEGSH-AHCHSSFHSSFLQVRRFTRASPQFLPPSSKVLTRIATVPSSKFEGSHALRHSSFLQVRRFSRASRASPQFLPPSSKVHTRFAT

Query:  VPSSKFEGSHSKFEGSHAHRHSSFLQVRRFTRASPQFLPPSSKVHTPSSKVLTRIATVPSSKFEGSHALRHSSFLQVRRFTRASPQFLPPSSKVHTRFAT
         P++  + +        AH +S  L V ++T+ S   LP   KVH        R+   P++  + +   +  S+  V ++T+ S   LP   KVH R   
Subjt:  VPSSKFEGSHSKFEGSHAHRHSSFLQVRRFTRASPQFLPPSSKVHTPSSKVLTRIATVPSSKFEGSHALRHSSFLQVRRFTRASPQFLPPSSKVHTRFAT

Query:  VP--FLQ------------VRRFSRASPQFLPPSSKVLTCIATVPSS
         P  +LQ            V ++++ S   LP   KV   +   P++
Subjt:  VP--FLQ------------VRRFSRASPQFLPPSSKVLTCIATVPSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCA
ACCTAAAAGAAAAATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCTCTGTTC
TCATAACTACAGAAGGTTCCTTGAAGTTCATTCTTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCATATCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTG
CAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACACGCTGCGTTGCAGTTCTTTCTCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGG
TTCTCACGCGCTTCGCGCTGCAGTTCCTTCCTCAAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGTTCCTTCCCTCCAAGTTTGAAGG
TTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCTTTCCCCCAAGTTCGAAGGTTCTCAGGCGCTTCGTGCAGTT
CCTTCCTCCAAATTCGAAGGTTCTCACGCACTTCGCTGCATTCCTTCCCCCAAATTCAAAGGTTCTCACGCGCTTGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGT
TCACACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCC
TTCCTCCAAGTTCGAAGGTTCACACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACA
CGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCCT
CCAAGTTCGAAGGTTCACATGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGC
TTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCATCGCC
ACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATTGCCACAGTTCCTTCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCC
TCCAAGTTCAAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCG
CTTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACACGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACTCCAAGTTCGAAGGTTCT
CACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACTCCAAGTTCGAAGGTTCTCAC
GCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCCTC
CAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGC
ATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCATCGCCACAGTTCCTTTGGGACTCGAACCCATGACCTTTAAATATGCAGCTTGGCTATTAAACCA
ATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCA
ACCTAAAAGAAAAATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCTCTGTTC
TCATAACTACAGAAGGTTCCTTGAAGTTCATTCTTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCATATCCTTCCTCCAAGTTCGAAGGTTCTCACGTGCTTCGCTG
CAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACACGCTGCGTTGCAGTTCTTTCTCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGG
TTCTCACGCGCTTCGCGCTGCAGTTCCTTCCTCAAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGTTCCTTCCCTCCAAGTTTGAAGG
TTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCTTTCCCCCAAGTTCGAAGGTTCTCAGGCGCTTCGTGCAGTT
CCTTCCTCCAAATTCGAAGGTTCTCACGCACTTCGCTGCATTCCTTCCCCCAAATTCAAAGGTTCTCACGCGCTTGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGT
TCACACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCC
TTCCTCCAAGTTCGAAGGTTCACACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACA
CGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCCT
CCAAGTTCGAAGGTTCACATGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGC
TTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCATCGCC
ACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATTGCCACAGTTCCTTCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCC
TCCAAGTTCAAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCG
CTTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACACGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACTCCAAGTTCGAAGGTTCT
CACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACTCCAAGTTCGAAGGTTCTCAC
GCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCTTCCTC
CAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGC
ATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCATCGCCACAGTTCCTTTGGGACTCGAACCCATGACCTTTAAATATGCAGCTTGGCTATTAAACCA
ATAG
Protein sequenceShow/hide protein sequence
MSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFILPSSKVLTSLRCISFLQVRRFSRASL
QFLLSKVEGSHTLRCSSFSQVRRFTHFAAVPSPKFEGSHALRAAVPSSKFEGSHIASLRSFLQVRSSFPPSLKVLTSLRCDPSSKFEGSHALRSAILSPKFEGSQALRAV
PSSKFEGSHALRCIPSPKFKGSHALASPQFLPPSSKVHTRFATVPSSKFEGSHAHRHSSFLQVRRFSRASPQFLPPSSKVHTRIATVPSSKFEGSHAHRHSSFLQVRRFT
RASPQFLPPSSKVHTRFATVPSSKFEGSHALRHSSFLQVRRFTCASPQFLPPSSKVLTRFATVPSSKFEGSHALRHSSFLQVRRFSRARRFSRASPQFLPPSSKVHTRIA
TVPSSKFEGSHAHCHSSFHSSFLQVRRFTRASPQFLPPSSKVLTRIATVPSSKFEGSHALRHSSFLQVRRFSRASRASPQFLPPSSKVHTRFATVPSSKFEGSHSKFEGS
HAHRHSSFLQVRRFTRASPQFLPPSSKVHTPSSKVLTRIATVPSSKFEGSHALRHSSFLQVRRFTRASPQFLPPSSKVHTRFATVPFLQVRRFSRASPQFLPPSSKVLTC
IATVPSSKFEGSLTRIATVPLGLEPMTFKYAAWLLNQ