; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027700 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027700
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box family protein
Genome locationchr8:3710514..3715679
RNA-Seq ExpressionLag0027700
SyntenyLag0027700
Gene Ontology termsNA
InterPro domainsIPR006527 - F-box associated domain, type 1
IPR011043 - Galactose oxidase/kelch, beta-propeller


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN59660.1 hypothetical protein Csa_001105 [Cucumis sativus]7.5e-0842Show/hide
Query:  GVFAFGPSSNEWKSVPFPLRLEI--DDDGVYLNGALFWIGCYN---VELESSYKNVLVCFDMEEERFKEISFPQAGRDGK-RNSLAIRVFDNHLYLSILD
        G F  G S  +W  VP  +R  +    DGVYLNG+L+W G YN   +++ +  K VL+ FD+E+E+F+ +SFP    D   R S  I +F+N LYLS  D
Subjt:  GVFAFGPSSNEWKSVPFPLRLEI--DDDGVYLNGALFWIGCYN---VELESSYKNVLVCFDMEEERFKEISFPQAGRDGK-RNSLAIRVFDNHLYLSILD

XP_004135796.1 putative F-box protein At1g46984 [Cucumis sativus]2.3e-0436.96Show/hide
Query:  VFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIGCYNVELE--SSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNHLYLS
        +FAFG +S EW  V        +  GVYLNG L+W+G   +     S Y  V+   D+++E+F++ISFP  G D       I V++  LYL+
Subjt:  VFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIGCYNVELE--SSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNHLYLS

XP_011652871.1 F-box/kelch-repeat protein At3g06240 [Cucumis sativus]7.5e-0842Show/hide
Query:  GVFAFGPSSNEWKSVPFPLRLEI--DDDGVYLNGALFWIGCYN---VELESSYKNVLVCFDMEEERFKEISFPQAGRDGK-RNSLAIRVFDNHLYLSILD
        G F  G S  +W  VP  +R  +    DGVYLNG+L+W G YN   +++ +  K VL+ FD+E+E+F+ +SFP    D   R S  I +F+N LYLS  D
Subjt:  GVFAFGPSSNEWKSVPFPLRLEI--DDDGVYLNGALFWIGCYN---VELESSYKNVLVCFDMEEERFKEISFPQAGRDGK-RNSLAIRVFDNHLYLSILD

XP_026451061.1 F-box/kelch-repeat protein At3g06240-like [Papaver somniferum]2.3e-0435.87Show/hide
Query:  SSSTNSLLVSREG-SRGSGVFAFGPSSNEWKSVP------FPLRLEIDDDGVYLNGALFWIGCYNVELESSYKNVLVCFDMEEERFKEISFP
        +S    L+VS E   + S +  +  +S+ WKS+P      FP R  I + GV+ NG L W+      L  S   V+V FD+ +ERFKE+  P
Subjt:  SSSTNSLLVSREG-SRGSGVFAFGPSSNEWKSVP------FPLRLEIDDDGVYLNGALFWIGCYNVELESSYKNVLVCFDMEEERFKEISFP

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]2.3e-0437.23Show/hide
Query:  VFAFGPSSNEWK---SVPFPLRLEIDDDGVYLNGALFWIGCYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNHLYLSI
        +FAFG +S EW    SVP+ L    +  GVY NG L+W+G   +   +   +V+   D+E+++FK+ISFP  G D + +   I V+++ LYL++
Subjt:  VFAFGPSSNEWK---SVPFPLRLEIDDDGVYLNGALFWIGCYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNHLYLSI

TrEMBL top hitse value%identityAlignment
A0A0A0LCB8 F-box domain-containing protein3.7e-0842Show/hide
Query:  GVFAFGPSSNEWKSVPFPLRLEI--DDDGVYLNGALFWIGCYN---VELESSYKNVLVCFDMEEERFKEISFPQAGRDGK-RNSLAIRVFDNHLYLSILD
        G F  G S  +W  VP  +R  +    DGVYLNG+L+W G YN   +++ +  K VL+ FD+E+E+F+ +SFP    D   R S  I +F+N LYLS  D
Subjt:  GVFAFGPSSNEWKSVPFPLRLEI--DDDGVYLNGALFWIGCYN---VELESSYKNVLVCFDMEEERFKEISFPQAGRDGK-RNSLAIRVFDNHLYLSILD

A0A0A0LCZ3 F-box domain-containing protein1.4e-0436.84Show/hide
Query:  GVFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIGCYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGK-RNSLAIRVFDNHLYLSILD
        G FA G    +W+    P    +   GVYLNG+L+W       + ++   VL+ FD+E+E+F+ +SFPQ  RD     S  I +F+N LY+S  D
Subjt:  GVFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIGCYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGK-RNSLAIRVFDNHLYLSILD

A0A0A0M1M5 F-box domain-containing protein1.1e-0436.96Show/hide
Query:  VFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIGCYNVELE--SSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNHLYLS
        +FAFG +S EW  V        +  GVYLNG L+W+G   +     S Y  V+   D+++E+F++ISFP  G D       I V++  LYL+
Subjt:  VFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIGCYNVELE--SSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNHLYLS

A0A438I6S0 F-box/kelch-repeat protein1.9e-0430.23Show/hide
Query:  FGPSSNEWKSV-PFPLRLEIDDDGVYLNGALFWIGCYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNHLYLSILDVDVLPDIHK
        F   +NEW+ V          D G +LNGA +W+     E    +  V+V FD++EERFKE+  P          + +RVF    YLS +  D+  ++ K
Subjt:  FGPSSNEWKSV-PFPLRLEIDDDGVYLNGALFWIGCYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNHLYLSILDVDVLPDIHK

Query:  LTVSLEESKNLSPAWTVIVTFQLRLNSPS
        + V   E K    +W  + T   R  + S
Subjt:  LTVSLEESKNLSPAWTVIVTFQLRLNSPS

F6I3R8 F-box domain-containing protein1.9e-0430.23Show/hide
Query:  FGPSSNEWKSV-PFPLRLEIDDDGVYLNGALFWIGCYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNHLYLSILDVDVLPDIHK
        F   +NEW+ V          D G +LNGA +W+     E    +  V+V FD++EERFKE+  P          + +RVF    YLS +  D+  ++ K
Subjt:  FGPSSNEWKSV-PFPLRLEIDDDGVYLNGALFWIGCYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNHLYLSILDVDVLPDIHK

Query:  LTVSLEESKNLSPAWTVIVTFQLRLNSPS
        + V   E K    +W  + T   R  + S
Subjt:  LTVSLEESKNLSPAWTVIVTFQLRLNSPS

SwissProt top hitse value%identityAlignment
Q1KS79 F-box protein At2g231601.1e-0430.99Show/hide
Query:  GSRGSGVFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIG----CYNVELESSYKNVLVCFDMEEERF
        G R   +   G  + +W+++   LR EI  +GV +NG L+++G      N + +  Y   +VCFD+  E+F
Subjt:  GSRGSGVFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIG----CYNVELESSYKNVLVCFDMEEERF

Q8S8C7 Putative F-box protein At2g162208.1e-0524.44Show/hide
Query:  LVSREGSRGSGVFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIG---CYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNH
        ++   G   S +  FG     WK + + +  +I   G+ +NG L+++G    ++ + + +  NVLVCFD+  E F  I          +  LA+  +D+ 
Subjt:  LVSREGSRGSGVFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIG---CYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNH

Query:  LYLSILDVDVLPDIHKLTVSLEESKNLSP---AWT
            + D D + ++H   +   E K  S     WT
Subjt:  LYLSILDVDVLPDIHKLTVSLEESKNLSP---AWT

Arabidopsis top hitse value%identityAlignment
AT1G30920.1 F-box family protein9.2e-0432.26Show/hide
Query:  VFAFGPSSNEWKSVPFPLRLEIDDDG-VYLNGALFWIGCYNVELESSYKNVLVCFDMEEERF
        +   G  +  W+ +  PLR     +G + +NG L+++   N  ++   KNVLVCFD+  E F
Subjt:  VFAFGPSSNEWKSVPFPLRLEIDDDG-VYLNGALFWIGCYNVELESSYKNVLVCFDMEEERF

AT2G16220.1 F-box and associated interaction domains-containing protein5.8e-0624.44Show/hide
Query:  LVSREGSRGSGVFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIG---CYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNH
        ++   G   S +  FG     WK + + +  +I   G+ +NG L+++G    ++ + + +  NVLVCFD+  E F  I          +  LA+  +D+ 
Subjt:  LVSREGSRGSGVFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIG---CYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNH

Query:  LYLSILDVDVLPDIHKLTVSLEESKNLSP---AWT
            + D D + ++H   +   E K  S     WT
Subjt:  LYLSILDVDVLPDIHKLTVSLEESKNLSP---AWT

AT2G16450.1 F-box and associated interaction domains-containing protein7.0e-0424.87Show/hide
Query:  IWLASTEAATRPTCLGRVPRPPFGPYCPDPSRFHTVAYTTPVCSGSTGFQVTSSSSSTNSLLVSREGSRGSGVFAFGPSSNEWKSVPFPLRLEIDDDGVY
        I++       RP     +  P  G Y   P+R     YT        GF          S +V   G   S V  FG    +W+ +   LR +I  +GV 
Subjt:  IWLASTEAATRPTCLGRVPRPPFGPYCPDPSRFHTVAYTTPVCSGSTGFQVTSSSSSTNSLLVSREGSRGSGVFAFGPSSNEWKSVPFPLRLEIDDDGVY

Query:  LNGALFWIG-------CYNVELESSYKNVLVCFDMEEERFKEISFPQAGR-DGKRNSLAIRVFDNHLYLSILDVDVLPDIHKLTVSLEE
        +NG L+++G            + S Y  ++VCFD+  E+F  I   +  R    +  LA+  +++       DVD+    +K  + +EE
Subjt:  LNGALFWIG-------CYNVELESSYKNVLVCFDMEEERFKEISFPQAGR-DGKRNSLAIRVFDNHLYLSILDVDVLPDIHKLTVSLEE

AT2G23160.1 F-box family protein7.5e-0630.99Show/hide
Query:  GSRGSGVFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIG----CYNVELESSYKNVLVCFDMEEERF
        G R   +   G  + +W+++   LR EI  +GV +NG L+++G      N + +  Y   +VCFD+  E+F
Subjt:  GSRGSGVFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIG----CYNVELESSYKNVLVCFDMEEERF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGAGCTGAGAAGGAACAGGCCAGAGGGTCGGCCAAATGCTGGAGGGATCGGGCCTTGGCCCAACCCATATGGTTGGCCTCGACCGAGGCGGCCACTCGGCCAAC
TTGCTTGGGCCGAGTCCCTAGGCCCCCGTTCGGTCCCTACTGCCCCGATCCGTCCCGGTTCCACACGGTGGCTTACACCACACCGGTGTGCAGCGGGTCTACTGGTTTTC
AGGTCACGTCTTCCTCGTCTTCAACAAATTCACTTCTAGTGTCACGTGAAGGTAGTAGAGGAAGTGGAGTTTTCGCATTTGGCCCAAGTTCAAACGAATGGAAGAGTGTT
CCCTTCCCGCTGCGTCTCGAGATCGACGACGATGGTGTTTACTTGAATGGAGCCCTTTTTTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAATGTCCT
TGTATGTTTCGACATGGAAGAGGAGAGATTCAAGGAAATTTCTTTTCCCCAAGCTGGGAGAGATGGGAAGAGAAATTCTTTGGCCATTAGGGTTTTTGATAACCATCTCT
ATCTCTCTATCTTAGATGTTGATGTTTTGCCAGATATTCACAAGCTCACAGTCAGCCTTGAAGAGTCAAAGAACCTATCACCAGCATGGACTGTCATAGTCACTTTCCAG
CTCAGATTAAATTCTCCTAGTCAGCAAGCCAAGCGATCCATTCGGCAACTGGGTCTCTGTGATAGAGCGATTGCTGTAGAAGCCGTGGTGTGCTTGTTCGAGAAGATAAC
GAATAATCCCTGTATTGAGCTGATGATTCTAGTGGATAGCCTCAAGTGGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGAGCTGAGAAGGAACAGGCCAGAGGGTCGGCCAAATGCTGGAGGGATCGGGCCTTGGCCCAACCCATATGGTTGGCCTCGACCGAGGCGGCCACTCGGCCAAC
TTGCTTGGGCCGAGTCCCTAGGCCCCCGTTCGGTCCCTACTGCCCCGATCCGTCCCGGTTCCACACGGTGGCTTACACCACACCGGTGTGCAGCGGGTCTACTGGTTTTC
AGGTCACGTCTTCCTCGTCTTCAACAAATTCACTTCTAGTGTCACGTGAAGGTAGTAGAGGAAGTGGAGTTTTCGCATTTGGCCCAAGTTCAAACGAATGGAAGAGTGTT
CCCTTCCCGCTGCGTCTCGAGATCGACGACGATGGTGTTTACTTGAATGGAGCCCTTTTTTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAATGTCCT
TGTATGTTTCGACATGGAAGAGGAGAGATTCAAGGAAATTTCTTTTCCCCAAGCTGGGAGAGATGGGAAGAGAAATTCTTTGGCCATTAGGGTTTTTGATAACCATCTCT
ATCTCTCTATCTTAGATGTTGATGTTTTGCCAGATATTCACAAGCTCACAGTCAGCCTTGAAGAGTCAAAGAACCTATCACCAGCATGGACTGTCATAGTCACTTTCCAG
CTCAGATTAAATTCTCCTAGTCAGCAAGCCAAGCGATCCATTCGGCAACTGGGTCTCTGTGATAGAGCGATTGCTGTAGAAGCCGTGGTGTGCTTGTTCGAGAAGATAAC
GAATAATCCCTGTATTGAGCTGATGATTCTAGTGGATAGCCTCAAGTGGATGTAG
Protein sequenceShow/hide protein sequence
MQGAEKEQARGSAKCWRDRALAQPIWLASTEAATRPTCLGRVPRPPFGPYCPDPSRFHTVAYTTPVCSGSTGFQVTSSSSSTNSLLVSREGSRGSGVFAFGPSSNEWKSV
PFPLRLEIDDDGVYLNGALFWIGCYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNHLYLSILDVDVLPDIHKLTVSLEESKNLSPAWTVIVTFQ
LRLNSPSQQAKRSIRQLGLCDRAIAVEAVVCLFEKITNNPCIELMILVDSLKWM