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Lag0027709 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027709
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr8:3832197..3833172
RNA-Seq ExpressionLag0027709
SyntenyLag0027709
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY96755.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Actinidia rufa]2.3e-1529.07Show/hide
Query:  MKAEVPQKFKVPT-FKPYDGKKDPVQNLNAYKN-----GWTSTV--------SQMQSIEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQK
        ++A +  KFK+PT    Y+GK DP+ +L++YK+     G +  V          +  +E  S+   ++A+  GL    L +S+ K+ P T +   S+A K
Subjt:  MKAEVPQKFKVPT-FKPYDGKKDPVQNLNAYKN-----GWTSTV--------SQMQSIEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQK

Query:  YMSTEELLKSKKSEREHKRHSSSDHDSKRD-----KRQRTDERGRGRPDNGRGR--PDQGGYL--------------------KKFEKKLKSSPDNRDKS
        Y++ EEL ++K+  R    H   + D++RD      R +  +R   R +N R R  P +  ++                     K+  K+K+ P  R+K+
Subjt:  YMSTEELLKSKKSEREHKRHSSSDHDSKRD-----KRQRTDERGRGRPDNGRGR--PDQGGYL--------------------KKFEKKLKSSPDNRDKS

Query:  QYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPDKNGG
        +YC FHRDH H+T +C QLK++I  LI+ GYL+++           RP  + P++  G
Subjt:  QYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPDKNGG

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.5e-1736.02Show/hide
Query:  IEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSDHDSKR--DKRQRTDERGRGRPDNGRGRPDQGGY
        +EG ++  +L+A  +G+ DE L  S GK  P T++E +SRAQ+YMS  E   SK+           + D KR   KR+R+ ++ +G     R R  Q   
Subjt:  IEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSDHDSKR--DKRQRTDERGRGRPDNGRGRPDQGGY

Query:  LKKFEK-------------------------KLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ
         +KFEK                         ++K+S   R K +YCLFHRDH H+T++C  LK+E+E LIR GYLKE+  + +A Q
Subjt:  LKKFEK-------------------------KLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ

XP_023896290.1 uncharacterized protein LOC112008184 [Quercus suber]2.3e-1539.19Show/hide
Query:  LVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSE-REHKRHSSSDHDSKRDKRQRTDERGRGRPDNGRGRPDQGGYLKKFEKKLKS
        L    AGL+   L++S+ K+ P+T AE + +AQKYM+ E+ L + + E R   +        KRD+  R +  G  R D+   R  Q  +  K+ + L S
Subjt:  LVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSE-REHKRHSSSDHDSKRDKRQRTDERGRGRPDNGRGRPDQGGYLKKFEKKLKS

Query:  SPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAE
        SP  RD+S+YC FH+DH H T +C  LK++IE LIR G L++F  K E
Subjt:  SPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAE

XP_023907630.1 uncharacterized protein LOC112019334 [Quercus suber]2.3e-1540.67Show/hide
Query:  LVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSDHDSKRDKRQRTDER---GRGRPDNGRGRPDQGGYLKKFEKKL
        L    AGL    L++S+ K+ P+T AE + +AQKYM  E+ L + K E         + D K  KR R + R   G  R D+   R  +  Y  K+ + L
Subjt:  LVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSDHDSKRDKRQRTDER---GRGRPDNGRGRPDQGGYLKKFEKKL

Query:  KSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAE
         SSP  RDKS+YC FH+DH H T +C  LK++IE LIR G L++F  K E
Subjt:  KSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAE

XP_030931060.1 uncharacterized protein LOC115956938 [Quercus lobata]6.2e-1633.82Show/hide
Query:  QNLNAYKNGWTSTVSQMQSIEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKS-KKSEREHKRHSSSD--HDSKRDKRQRT
        + L +Y   +T    ++   +   +   L    AGL+   L+ S+ K+ P+T AE + +AQKYM+ E+ L + K +ER   +    D     KRD+ +R 
Subjt:  QNLNAYKNGWTSTVSQMQSIEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKS-KKSEREHKRHSSSD--HDSKRDKRQRT

Query:  DERGRGRPDNGRGRPDQGGYLKKFEKKLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAE-----ADQRWPRPTRDDPDKNG
        +  G  R D+   R  +  +  K+ K L SSP+ RDK++YC FHRDH H+T +C  LK++IE LIR G L+++  K E      D R  R T    D + 
Subjt:  DERGRGRPDNGRGRPDQGGYLKKFEKKLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAE-----ADQRWPRPTRDDPDKNG

Query:  GGPPVEI
          PP ++
Subjt:  GGPPVEI

TrEMBL top hitse value%identityAlignment
A0A2N9GS02 Ribonuclease H2.1e-1430.24Show/hide
Query:  VPQKFKVPTFKPYDGKKDPVQNLNAYK-------------------------NGWTSTV---------SQMQSIEGYSEGAALVAITAGLEDERLLNSIG
        +P KFKVP  + +DG KDP+  L++++                           W + +         S+   I+  +E  AL A  AGL     L  + 
Subjt:  VPQKFKVPTFKPYDGKKDPVQNLNAYK-------------------------NGWTSTV---------SQMQSIEGYSEGAALVAITAGLEDERLLNSIG

Query:  KSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSDH--DSKRDKRQRTDERGRGRPDNGRGRPDQGGYLKKFEKKLKSSPDNRDKSQYCLFHRDH
        K  P++ +E +  AQK+++ E+  +++      KR    D   DS R+K  R D      P   R          K+  KL+S P  R K  YC FHRDH
Subjt:  KSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSDH--DSKRDKRQRTDERGRGRPDNGRGRPDQGGYLKKFEKKLKSSPDNRDKSQYCLFHRDH

Query:  EHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRW-PRPTRDDPDKN
         H+T +C  LK +I+ALIR G L +F  + + + R  PRP R D +K+
Subjt:  EHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRW-PRPTRDDPDKN

A0A6J1DWY0 uncharacterized protein LOC1110252931.2e-1736.02Show/hide
Query:  IEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSDHDSKR--DKRQRTDERGRGRPDNGRGRPDQGGY
        +EG ++  +L+A  +G+ DE L  S GK  P T++E +SRAQ+YMS  E   SK+           + D KR   KR+R+ ++ +G     R R  Q   
Subjt:  IEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSDHDSKR--DKRQRTDERGRGRPDNGRGRPDQGGY

Query:  LKKFEK-------------------------KLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ
         +KFEK                         ++K+S   R K +YCLFHRDH H+T++C  LK+E+E LIR GYLKE+  + +A Q
Subjt:  LKKFEK-------------------------KLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ

A0A6J1DYL6 uncharacterized protein LOC1110257851.6e-1434.41Show/hide
Query:  IEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSDHDSKR--DKRQRTDERGRGRPDNGRGRPDQGGY
        IE  ++  +L+A  +G+ DE L  S GK  P T++E +SRAQ+YMS  E   SK+           + D KR   KR+R+ ++ +G     R R  Q   
Subjt:  IEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSDHDSKR--DKRQRTDERGRGRPDNGRGRPDQGGY

Query:  LKKFEK-------------------------KLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ
         +KFEK                         ++K     R K +YCLFHRDH H+T++   LK+E+E LIR GYL+E+  + +A Q
Subjt:  LKKFEK-------------------------KLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ

A0A6J1DZ52 uncharacterized protein LOC1110256122.8e-1436.17Show/hide
Query:  AGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEEL------LKSKKSEREHKRHSSSDHDSKRDKRQRTDERGRGRPDNGRG---------------RP
        +G++DE L  S GK  P T+AE +SRAQKYMS EE       L+ K+++++ +R       SK +K+ R      G+ D  R                  
Subjt:  AGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEEL------LKSKKSEREHKRHSSSDHDSKRDKRQRTDERGRGRPDNGRG---------------RP

Query:  DQGGYLKKFEKKLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPDKNGGGPPVEIR
         +   L K+ + +K+ P+ R K +YCLFHRDH H+T +C  LK+E+E LIR GYLKE+    +A      P R++ +K+   P  EIR
Subjt:  DQGGYLKKFEKKLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPDKNGGGPPVEIR

A0A7J0FDJ8 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein1.1e-1529.07Show/hide
Query:  MKAEVPQKFKVPT-FKPYDGKKDPVQNLNAYKN-----GWTSTV--------SQMQSIEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQK
        ++A +  KFK+PT    Y+GK DP+ +L++YK+     G +  V          +  +E  S+   ++A+  GL    L +S+ K+ P T +   S+A K
Subjt:  MKAEVPQKFKVPT-FKPYDGKKDPVQNLNAYKN-----GWTSTV--------SQMQSIEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQK

Query:  YMSTEELLKSKKSEREHKRHSSSDHDSKRD-----KRQRTDERGRGRPDNGRGR--PDQGGYL--------------------KKFEKKLKSSPDNRDKS
        Y++ EEL ++K+  R    H   + D++RD      R +  +R   R +N R R  P +  ++                     K+  K+K+ P  R+K+
Subjt:  YMSTEELLKSKKSEREHKRHSSSDHDSKRD-----KRQRTDERGRGRPDNGRGR--PDQGGYL--------------------KKFEKKLKSSPDNRDKS

Query:  QYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPDKNGG
        +YC FHRDH H+T +C QLK++I  LI+ GYL+++           RP  + P++  G
Subjt:  QYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPDKNGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCCGAGGTGCCCCAAAAGTTCAAGGTACCCACGTTCAAACCGTACGATGGCAAGAAAGACCCCGTGCAAAATCTAAATGCCTACAAAAATGGATGGACTTCCAC
GGTGTCTCAGATGCAATCAATTGAGGGATACAGTGAGGGAGCAGCCCTAGTAGCCATCACAGCCGGGCTGGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGTCAAC
CTCGAACCTATGCAGAGTTCGTCTCCCGGGCACAGAAATACATGAGCACAGAAGAGTTGCTCAAGTCAAAGAAGTCAGAACGAGAACACAAGAGACATTCTTCATCTGAC
CATGACAGTAAGAGGGACAAGAGGCAACGAACAGACGAAAGAGGTCGAGGTCGACCAGACAATGGTCGAGGCCGACCAGACCAAGGAGGCTACTTGAAGAAGTTTGAGAA
GAAGCTGAAGTCAAGTCCTGACAACAGAGACAAGAGCCAGTATTGTCTCTTCCATCGAGATCACGAACATTCAACCAGGAACTGCATCCAGCTAAAGGACGAAATCGAAG
CACTAATTCGGAACGGATACTTGAAGGAGTTCACCACAAAGGCCGAGGCCGACCAGAGATGGCCGAGGCCAACCAGAGATGACCCAGACAAAAATGGTGGTGGACCTCCT
GTGGAAATCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCCGAGGTGCCCCAAAAGTTCAAGGTACCCACGTTCAAACCGTACGATGGCAAGAAAGACCCCGTGCAAAATCTAAATGCCTACAAAAATGGATGGACTTCCAC
GGTGTCTCAGATGCAATCAATTGAGGGATACAGTGAGGGAGCAGCCCTAGTAGCCATCACAGCCGGGCTGGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGTCAAC
CTCGAACCTATGCAGAGTTCGTCTCCCGGGCACAGAAATACATGAGCACAGAAGAGTTGCTCAAGTCAAAGAAGTCAGAACGAGAACACAAGAGACATTCTTCATCTGAC
CATGACAGTAAGAGGGACAAGAGGCAACGAACAGACGAAAGAGGTCGAGGTCGACCAGACAATGGTCGAGGCCGACCAGACCAAGGAGGCTACTTGAAGAAGTTTGAGAA
GAAGCTGAAGTCAAGTCCTGACAACAGAGACAAGAGCCAGTATTGTCTCTTCCATCGAGATCACGAACATTCAACCAGGAACTGCATCCAGCTAAAGGACGAAATCGAAG
CACTAATTCGGAACGGATACTTGAAGGAGTTCACCACAAAGGCCGAGGCCGACCAGAGATGGCCGAGGCCAACCAGAGATGACCCAGACAAAAATGGTGGTGGACCTCCT
GTGGAAATCCGTTGA
Protein sequenceShow/hide protein sequence
MKAEVPQKFKVPTFKPYDGKKDPVQNLNAYKNGWTSTVSQMQSIEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSD
HDSKRDKRQRTDERGRGRPDNGRGRPDQGGYLKKFEKKLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPDKNGGGPP
VEIR