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Lag0027713 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027713
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:3947930..3948634
RNA-Seq ExpressionLag0027713
SyntenyLag0027713
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5458995.1 hypothetical protein F2P56_022987 [Juglans regia]1.9e-1243.82Show/hide
Query:  ETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIVG
        E  DP+ I+     +F H+ SS NPS  E++  +  VQ +VT VMN  LL+ FT+E++ VAL QI   KA GP+G    F+   W+IVG
Subjt:  ETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIVG

XP_021838584.1 uncharacterized protein LOC110778326 [Spinacia oleracea]1.5e-1234.96Show/hide
Query:  NSRRLDQNLSLFWLRRRFTGSRDLVSTGGDG-GIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIH
        N R  DQN   F L+      R+ +    +G G+   D  ++  + +EYF ++ ++ NP   E+  A+  +Q  VTD +N  L+R F   ++  AL Q+H
Subjt:  NSRRLDQNLSLFWLRRRFTGSRDLVSTGGDG-GIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIH

Query:  PNKALGPDGMSGAFYRQSWEIVG
        P+KA GPDGM+  F++++W IVG
Subjt:  PNKALGPDGMSGAFYRQSWEIVG

XP_023874626.1 uncharacterized protein LOC111987155 [Quercus suber]2.9e-1347.83Show/hide
Query:  DGGIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIV
        D G+   D   I R+IL+YFS I  S NPS    D+++  +   V++ MNG LL  F  E++ VAL Q+HP KA GPDGMS  FY++ WEIV
Subjt:  DGGIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIV

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]1.7e-1346.67Show/hide
Query:  ILRLILEYFSHIHSSCNPS-VDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIVGGRCDQML
        I +  + YF++I+SS +PS ++E+  AI      VT+ MN  L+R FT+E++ VAL QIHPNKA GPDGMS  F+++ W IVG     M+
Subjt:  ILRLILEYFSHIHSSCNPS-VDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIVGGRCDQML

XP_023912601.1 uncharacterized protein LOC112024185 [Quercus suber]1.5e-1229.83Show/hide
Query:  VVEDAGQSGAADASTMGLVRATNQFLTSLSIWGKG--------WNSRRL-------DQNLSLFWLRRRFTGSRDLVS-TGGDGGIETPDPLDILRLILEY
        V+E A  SG    ++ G+V    +  ++L+ W +         W  R         D+N   F  R      ++ +S    + GI       I    L Y
Subjt:  VVEDAGQSGAADASTMGLVRATNQFLTSLSIWGKG--------WNSRRL-------DQNLSLFWLRRRFTGSRDLVS-TGGDGGIETPDPLDILRLILEY

Query:  FSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIVGGRCDQML
        F +I++S +P+   I+  I  +   VTD MN  L + FT E+++ AL Q+HP KA  PDGMS  F+   W+IVG     M+
Subjt:  FSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIVGGRCDQML

TrEMBL top hitse value%identityAlignment
A0A2N9EEA9 CCHC-type domain-containing protein2.1e-1238.66Show/hide
Query:  DQNLSLFWLRRRFTGSRDLVS--TGGDGGIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKA
        DQN   F  +       + +S     DG  +T D + +  L +EYF +I +S  P    ID  +  V+  VT  MN  LL+ F++E++  AL Q++P KA
Subjt:  DQNLSLFWLRRRFTGSRDLVS--TGGDGGIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKA

Query:  LGPDGMSGAFYRQSWEIVG
         GPDGMS  FY+  WEIVG
Subjt:  LGPDGMSGAFYRQSWEIVG

A0A2N9GPZ7 Reverse transcriptase domain-containing protein2.7e-1236.73Show/hide
Query:  GIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIVGGRCDQML
        G+   +   I  + ++YF  I +S NPS + I   +  ++  VT+ MN  L   FT++++ +AL Q++P KA GPDGMS  FY+  W+IVG    Q +
Subjt:  GIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIVGGRCDQML

A0A2N9HND5 CCHC-type domain-containing protein2.1e-1238.66Show/hide
Query:  DQNLSLFWLRRRFTGSRDLVS--TGGDGGIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKA
        DQN   F  +       + +S     DG  +T D + +  L +EYF +I +S  P    ID  +  V+  VT  MN  LL+ F++E++  AL Q++P KA
Subjt:  DQNLSLFWLRRRFTGSRDLVS--TGGDGGIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKA

Query:  LGPDGMSGAFYRQSWEIVG
         GPDGMS  FY+  WEIVG
Subjt:  LGPDGMSGAFYRQSWEIVG

A0A2N9I335 Reverse transcriptase domain-containing protein2.1e-1237.76Show/hide
Query:  GIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIVGGRCDQML
        G+   D + +  + ++YF  I SS NP  + I+  +  ++  VT+ MN  LL  F  E++  AL Q++P KA GPDGMS  FY+  W+IVG    Q +
Subjt:  GIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIVGGRCDQML

A0A7N2L6Z9 Reverse transcriptase domain-containing protein1.9e-1339.68Show/hide
Query:  DQNLSLFWLRRRFTGSRDLVSTGGDG-GIETPDPLDILRLILEYFSHIHSSCNPS-VDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKA
        D+N   F  R      ++ +S   D  G    D   I    + YF  I+S+ NPS VDE+  AI  +   +T+ MN  L R FT+E+IV AL QIHP K+
Subjt:  DQNLSLFWLRRRFTGSRDLVSTGGDG-GIETPDPLDILRLILEYFSHIHSSCNPS-VDEIDRAIGNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKA

Query:  LGPDGMSGAFYRQSWEIVGGRCDQML
         GPDGMS  F+++ W+IVG     M+
Subjt:  LGPDGMSGAFYRQSWEIVGGRCDQML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCCTGAGTTCAGGAGTGTGGTGGAGGATGCTGGGCAGTCAGGTGCAGCTGATGCCTCAACAATGGGGTTGGTAAGGGCTACTAACCAGTTTCTTACTTCTCTTTC
CATATGGGGTAAAGGATGGAACTCTAGGAGGCTGGATCAAAACTTGAGTCTGTTCTGGTTGAGGAGAAGGTTTACTGGAAGCAGAGATCTCGTGAGCACTGGTGGAGATG
GAGGGATAGAAACACCTGACCCACTGGACATCCTCAGGCTGATTTTAGAGTACTTCTCTCATATCCATTCATCATGTAACCCTTCAGTGGATGAGATTGACAGAGCTATT
GGTAATGTGCAGGTGACAGTGACAGATGTGATGAATGGGCATCTGCTGAGGCATTTTACTCAAGAGGACATAGTTGTGGCTTTGGGTCAGATTCATCCAAATAAGGCCCT
TGGTCCGGATGGGATGTCAGGTGCTTTTTATAGACAGTCATGGGAGATAGTTGGGGGAAGATGTGATCAGATGCTGTTTGAGGATCCTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTACCCTGAGTTCAGGAGTGTGGTGGAGGATGCTGGGCAGTCAGGTGCAGCTGATGCCTCAACAATGGGGTTGGTAAGGGCTACTAACCAGTTTCTTACTTCTCTTTC
CATATGGGGTAAAGGATGGAACTCTAGGAGGCTGGATCAAAACTTGAGTCTGTTCTGGTTGAGGAGAAGGTTTACTGGAAGCAGAGATCTCGTGAGCACTGGTGGAGATG
GAGGGATAGAAACACCTGACCCACTGGACATCCTCAGGCTGATTTTAGAGTACTTCTCTCATATCCATTCATCATGTAACCCTTCAGTGGATGAGATTGACAGAGCTATT
GGTAATGTGCAGGTGACAGTGACAGATGTGATGAATGGGCATCTGCTGAGGCATTTTACTCAAGAGGACATAGTTGTGGCTTTGGGTCAGATTCATCCAAATAAGGCCCT
TGGTCCGGATGGGATGTCAGGTGCTTTTTATAGACAGTCATGGGAGATAGTTGGGGGAAGATGTGATCAGATGCTGTTTGAGGATCCTGAATAA
Protein sequenceShow/hide protein sequence
MYPEFRSVVEDAGQSGAADASTMGLVRATNQFLTSLSIWGKGWNSRRLDQNLSLFWLRRRFTGSRDLVSTGGDGGIETPDPLDILRLILEYFSHIHSSCNPSVDEIDRAI
GNVQVTVTDVMNGHLLRHFTQEDIVVALGQIHPNKALGPDGMSGAFYRQSWEIVGGRCDQMLFEDPE