; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027715 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027715
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:3950665..3954587
RNA-Seq ExpressionLag0027715
SyntenyLag0027715
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006484927.1 uncharacterized protein LOC102626623 [Citrus sinensis]2.4e-2228.98Show/hide
Query:  EMEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDL---CVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSP
        + E+L+++ K + L +E+ + ++     G +  D   +   C+  K+LL++ +N +  R  M+  W+     ++E   DN+F  +  +  +K RV+   P
Subjt:  EMEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDL---CVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSP

Query:  WAFDRSLIVMKEPIGELSVM------------------------TI-LLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWW
        W FD++LIV+ EP+G  S+                         TI  LG KI ++EEV   E+ E   P  R+ + +++ + L+R   L+    E+I  
Subjt:  WAFDRSLIVMKEPIGELSVM------------------------TI-LLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWW

Query:  LILYERLPDFCYNYGRLGHSWRECVLEVAEDVCGAREQYGEWMRA
        LI Y+RLPDFC+  G +GH +REC+    +     +  YG WM+A
Subjt:  LILYERLPDFCYNYGRLGHSWRECVLEVAEDVCGAREQYGEWMRA

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]5.7e-4035.66Show/hide
Query:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD
        M+++   W+  K T ++ E +  D    +L AD++ LCV +K+  SK+I+ +  RSVMK+VWRVH +TR E    N++ I  +S  EK RV++S PW F+
Subjt:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD

Query:  RSLIVMKEPIGE-------------------------LSVMTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLILY
        +SL+V+  P                             + M  +LG K+  +EE+ G   + W  P +R+ V +++ + L+RG KL+NSD ++IW  + Y
Subjt:  RSLIVMKEPIGE-------------------------LSVMTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLILY

Query:  ERLPDFCYNYGRLGHSWRECVLEVAEDVCGAREQYGEWMRAGMM
        E+LPDFCY  G++GHS REC          + EQYG+W+RA ++
Subjt:  ERLPDFCYNYGRLGHSWRECVLEVAEDVCGAREQYGEWMRAGMM

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]3.1e-2230.85Show/hide
Query:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD
        M+++ + W+   LT+EK E II D+   ++  +++      K+  SK+I+++ FRSVMK++W+VH +T IE A  N++ I  +S  EK RV+ S PW+F+
Subjt:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD

Query:  RSLIVMKEPIGE-------------------------LSVMTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLILY
         SL+V+  P                            +  M   LG +I  +EE+  +   EWT P +R+ V +++ +  +RG K++  D +E W  + Y
Subjt:  RSLIVMKEPIGE-------------------------LSVMTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLILY

Query:  E
        E
Subjt:  E

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]3.0e-3336.07Show/hide
Query:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD
        M+D+ + W+   L +E+ + I+ D    +L  D+I LC   K+  SK+I ++ F SVMK VW++H +TRIE A  N++ I  ++  EK+RV +  PW FD
Subjt:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD

Query:  RSLIVM------KEPIG-ELSV------------------MTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLILY
        +SL+++       +P+  ++S+                  M   LG ++  +EEV G    +W RP L + V +N+ + L+RG K++ SD ++IW  + Y
Subjt:  RSLIVM------KEPIG-ELSV------------------MTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLILY

Query:  ERLPDFCYNYGRLGHSWRE
        ERLPDFCY  G +GHS RE
Subjt:  ERLPDFCYNYGRLGHSWRE

XP_028117212.1 uncharacterized protein LOC114314884 [Camellia sinensis]6.3e-2331.98Show/hide
Query:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD
        +EDL   W+ L LTEE+   ++ D +       +  LC+  K+L  +  N+D  RS + +VW+       +   DN+  IQ     +K RVM + PW+FD
Subjt:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD

Query:  RSLIVMKE-----PIGELSVMT--------------------ILLGNKIERLEEV-YGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLIL
        + L+++KE        E++  T                    +LLGN + +  ++ YG     W R  L + + +N+++ L+RG KL     E +W  + 
Subjt:  RSLIVMKE-----PIGELSVMT--------------------ILLGNKIERLEEV-YGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLIL

Query:  YERLPDFCYNYGRLGHSWREC---VLEVA--EDVCGAREQYGEWMRA
        YERLP+FC++ G LGHS  +C   +LE A  E+V   R QYG W+RA
Subjt:  YERLPDFCYNYGRLGHSWREC---VLEVA--EDVCGAREQYGEWMRA

TrEMBL top hitse value%identityAlignment
A0A5C7GV57 Uncharacterized protein9.8e-2226.72Show/hide
Query:  EMEDLVQKWKALKL-TEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWA
        + E++V+   +L L ++E+    I DT+        +DLC+  KVL +K IN + FR+VM  VW+      +E+  DN F     ++ ++ R+ +  PW+
Subjt:  EMEDLVQKWKALKL-TEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWA

Query:  FDRSLIVMKEPIGELSVMTI-------------------------LLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLI
        FD SL+V+++P+G   V ++                          +G  I  L+++      E+    +RL + +++ + L+R  +L+    +E   L+
Subjt:  FDRSLIVMKEPIGELSVMTI-------------------------LLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLI

Query:  LYERLPDFCYNYGRLGHSWRECVLEVAEDVCGARE-QYGEWMRAGMMVGDMGKRG-EDERGEGLNTDKQRESGSERGEVPARGADPGDEGQPETEVVAGE
         YE+LP++C++ G +GHS+++C      D+   +E ++G WMRA    G     G    RG+G+ T+               GA   + GQ    VVAG 
Subjt:  LYERLPDFCYNYGRLGHSWRECVLEVAEDVCGARE-QYGEWMRAGMMVGDMGKRG-EDERGEGLNTDKQRESGSERGEVPARGADPGDEGQPETEVVAGE

Query:  VAKLCNPEV--HASVKGKEKVGLGEIAEVGRSEGAMEVNGAVGNQSERM----ILIERVQKGKGWKRKARGS--LIDVTNTVDSTGRLRPKRK
           +CN +V     + G+   G  E+   G S     VN    N  E      + I  V++G G +    G   L DVT  VD +   + K K
Subjt:  VAKLCNPEV--HASVKGKEKVGLGEIAEVGRSEGAMEVNGAVGNQSERM----ILIERVQKGKGWKRKARGS--LIDVTNTVDSTGRLRPKRK

A0A5C7HVE7 Uncharacterized protein4.4e-2232.86Show/hide
Query:  IDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFDRSLIVMKE-----PIGELSVMTI-----------
        ++LC+  K++ SK +N D FR+VM  +WR  G   IE+  DN F    RS+ ++ RV+A  PW+FD SL+VM++      IG++    +           
Subjt:  IDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFDRSLIVMKE-----PIGELSVMTI-----------

Query:  ---------LLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQ-NSDAEEIWWLILYERLPDFCYNYGRLGHSWRECVLEVAEDVCGARE
                  LG  I  L ++      E     LR+ VG+++ + LQR  ++    D  E   L+ YERLPD+C+ YG +GHS+  C   ++    GAR 
Subjt:  ---------LLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQ-NSDAEEIWWLILYERLPDFCYNYGRLGHSWRECVLEVAEDVCGARE

Query:  -----QYGEWMRA
              YG+W+RA
Subjt:  -----QYGEWMRA

A0A6J1D765 uncharacterized protein LOC1110179022.7e-4035.66Show/hide
Query:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD
        M+++   W+  K T ++ E +  D    +L AD++ LCV +K+  SK+I+ +  RSVMK+VWRVH +TR E    N++ I  +S  EK RV++S PW F+
Subjt:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD

Query:  RSLIVMKEPIGE-------------------------LSVMTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLILY
        +SL+V+  P                             + M  +LG K+  +EE+ G   + W  P +R+ V +++ + L+RG KL+NSD ++IW  + Y
Subjt:  RSLIVMKEPIGE-------------------------LSVMTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLILY

Query:  ERLPDFCYNYGRLGHSWRECVLEVAEDVCGAREQYGEWMRAGMM
        E+LPDFCY  G++GHS REC          + EQYG+W+RA ++
Subjt:  ERLPDFCYNYGRLGHSWRECVLEVAEDVCGAREQYGEWMRAGMM

A0A6J1DP89 uncharacterized protein LOC1110229321.5e-2230.85Show/hide
Query:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD
        M+++ + W+   LT+EK E II D+   ++  +++      K+  SK+I+++ FRSVMK++W+VH +T IE A  N++ I  +S  EK RV+ S PW+F+
Subjt:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD

Query:  RSLIVMKEPIGE-------------------------LSVMTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLILY
         SL+V+  P                            +  M   LG +I  +EE+  +   EWT P +R+ V +++ +  +RG K++  D +E W  + Y
Subjt:  RSLIVMKEPIGE-------------------------LSVMTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLILY

Query:  E
        E
Subjt:  E

A0A6J1DVS4 uncharacterized protein LOC1110235551.5e-3336.07Show/hide
Query:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD
        M+D+ + W+   L +E+ + I+ D    +L  D+I LC   K+  SK+I ++ F SVMK VW++H +TRIE A  N++ I  ++  EK+RV +  PW FD
Subjt:  MEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDVFRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFD

Query:  RSLIVM------KEPIG-ELSV------------------MTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLILY
        +SL+++       +P+  ++S+                  M   LG ++  +EEV G    +W RP L + V +N+ + L+RG K++ SD ++IW  + Y
Subjt:  RSLIVM------KEPIG-ELSV------------------MTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQNSDAEEIWWLILY

Query:  ERLPDFCYNYGRLGHSWRE
        ERLPDFCY  G +GHS RE
Subjt:  ERLPDFCYNYGRLGHSWRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTCACGGGTGTGGTCGTGCACGAAAGAGGAAGGGAGCGGCGGAACAGGAGTGGCGACGGGAAGGACGACAACGGCGGAATAGGAGCGGCGACGCTGGGGATTAT
GAGAATGAGTGGGTGTCGCAGAGTAGTCAAACGAGGCGAGCAAAGGTTTCAGGGTCGTGAGATGGAAGATCTGGTTCAAAAGTGGAAGGCGCTGAAACTGACGGAAGAGA
AGGCGGAGATGATCATAGCAGACACAATTCCGGGGGTTTTACCGGCTGACTCCATTGATCTGTGTGTTTACAGTAAGGTTTTGTTGTCAAAGAAGATTAATCTAGATGTT
TTTCGATCAGTTATGAAAGCTGTTTGGAGAGTACACGGGGCGACAAGGATTGAATTGGCCATGGACAACGTGTTCGCTATCCAGCTCCGATCGAGATGGGAGAAGCTTCG
TGTCATGGCTTCGAGTCCGTGGGCCTTCGATCGATCGCTGATTGTGATGAAGGAACCGATTGGGGAGCTATCAGTGATGACGATCCTATTGGGGAACAAAATAGAACGTC
TGGAGGAGGTATATGGTTCGGAGGACAATGAATGGACTCGACCGGTTTTGAGACTTGTGGTGGGTTTAAATTTAGAAAGACGACTCCAGCGTGGCTTCAAACTCCAAAAC
AGTGATGCAGAGGAGATTTGGTGGCTGATTCTGTATGAGAGGCTCCCTGACTTTTGCTACAATTATGGGCGCTTAGGGCACTCTTGGAGGGAATGTGTGCTTGAAGTGGC
AGAAGATGTGTGTGGGGCTAGGGAACAGTATGGTGAGTGGATGAGAGCGGGGATGATGGTGGGGGATATGGGAAAGAGAGGTGAGGATGAGAGGGGGGAGGGCCTAAACA
CAGATAAGCAAAGGGAGAGTGGGAGTGAGAGGGGAGAGGTTCCTGCTCGGGGGGCTGATCCTGGGGATGAGGGCCAACCTGAGACCGAAGTGGTGGCGGGGGAGGTGGCT
AAATTGTGTAACCCGGAGGTTCATGCCAGTGTGAAAGGAAAAGAGAAGGTCGGATTGGGAGAGATAGCGGAAGTGGGCAGAAGTGAGGGAGCGATGGAAGTTAATGGGGC
AGTAGGTAATCAGTCTGAAAGGATGATCCTAATAGAGAGGGTGCAGAAAGGGAAGGGATGGAAGAGGAAAGCTCGAGGTTCTCTGATAGATGTCACAAACACAGTTGACA
GTACTGGAAGGTTGAGACCTAAGCGAAAAGCTCCCATAAGTGCCTCTGGATCTCAGGGGAGCAGAAAGGCTAGAAGTGATAGTACTCCCGAAAAAGGTAGGGGGACGGAC
TTGGAGGCTGACGCAGAGATGTTGATTGTTGATAATGTGGCGGTGGTTGGGGACCAGCCCCGCCGGTTATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTCACGGGTGTGGTCGTGCACGAAAGAGGAAGGGAGCGGCGGAACAGGAGTGGCGACGGGAAGGACGACAACGGCGGAATAGGAGCGGCGACGCTGGGGATTAT
GAGAATGAGTGGGTGTCGCAGAGTAGTCAAACGAGGCGAGCAAAGGTTTCAGGGTCGTGAGATGGAAGATCTGGTTCAAAAGTGGAAGGCGCTGAAACTGACGGAAGAGA
AGGCGGAGATGATCATAGCAGACACAATTCCGGGGGTTTTACCGGCTGACTCCATTGATCTGTGTGTTTACAGTAAGGTTTTGTTGTCAAAGAAGATTAATCTAGATGTT
TTTCGATCAGTTATGAAAGCTGTTTGGAGAGTACACGGGGCGACAAGGATTGAATTGGCCATGGACAACGTGTTCGCTATCCAGCTCCGATCGAGATGGGAGAAGCTTCG
TGTCATGGCTTCGAGTCCGTGGGCCTTCGATCGATCGCTGATTGTGATGAAGGAACCGATTGGGGAGCTATCAGTGATGACGATCCTATTGGGGAACAAAATAGAACGTC
TGGAGGAGGTATATGGTTCGGAGGACAATGAATGGACTCGACCGGTTTTGAGACTTGTGGTGGGTTTAAATTTAGAAAGACGACTCCAGCGTGGCTTCAAACTCCAAAAC
AGTGATGCAGAGGAGATTTGGTGGCTGATTCTGTATGAGAGGCTCCCTGACTTTTGCTACAATTATGGGCGCTTAGGGCACTCTTGGAGGGAATGTGTGCTTGAAGTGGC
AGAAGATGTGTGTGGGGCTAGGGAACAGTATGGTGAGTGGATGAGAGCGGGGATGATGGTGGGGGATATGGGAAAGAGAGGTGAGGATGAGAGGGGGGAGGGCCTAAACA
CAGATAAGCAAAGGGAGAGTGGGAGTGAGAGGGGAGAGGTTCCTGCTCGGGGGGCTGATCCTGGGGATGAGGGCCAACCTGAGACCGAAGTGGTGGCGGGGGAGGTGGCT
AAATTGTGTAACCCGGAGGTTCATGCCAGTGTGAAAGGAAAAGAGAAGGTCGGATTGGGAGAGATAGCGGAAGTGGGCAGAAGTGAGGGAGCGATGGAAGTTAATGGGGC
AGTAGGTAATCAGTCTGAAAGGATGATCCTAATAGAGAGGGTGCAGAAAGGGAAGGGATGGAAGAGGAAAGCTCGAGGTTCTCTGATAGATGTCACAAACACAGTTGACA
GTACTGGAAGGTTGAGACCTAAGCGAAAAGCTCCCATAAGTGCCTCTGGATCTCAGGGGAGCAGAAAGGCTAGAAGTGATAGTACTCCCGAAAAAGGTAGGGGGACGGAC
TTGGAGGCTGACGCAGAGATGTTGATTGTTGATAATGTGGCGGTGGTTGGGGACCAGCCCCGCCGGTTATCATGA
Protein sequenceShow/hide protein sequence
MGLTGVVVHERGRERRNRSGDGKDDNGGIGAATLGIMRMSGCRRVVKRGEQRFQGREMEDLVQKWKALKLTEEKAEMIIADTIPGVLPADSIDLCVYSKVLLSKKINLDV
FRSVMKAVWRVHGATRIELAMDNVFAIQLRSRWEKLRVMASSPWAFDRSLIVMKEPIGELSVMTILLGNKIERLEEVYGSEDNEWTRPVLRLVVGLNLERRLQRGFKLQN
SDAEEIWWLILYERLPDFCYNYGRLGHSWRECVLEVAEDVCGAREQYGEWMRAGMMVGDMGKRGEDERGEGLNTDKQRESGSERGEVPARGADPGDEGQPETEVVAGEVA
KLCNPEVHASVKGKEKVGLGEIAEVGRSEGAMEVNGAVGNQSERMILIERVQKGKGWKRKARGSLIDVTNTVDSTGRLRPKRKAPISASGSQGSRKARSDSTPEKGRGTD
LEADAEMLIVDNVAVVGDQPRRLS