; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027721 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027721
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr8:4034164..4037558
RNA-Seq ExpressionLag0027721
SyntenyLag0027721
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG98819.1 VIRB2-interacting protein 2 [Prunus dulcis]2.5e-10531.98Show/hide
Query:  LISAGDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNSGV
        ++S G+IE E I F+K LY+ + +  +    L+W+ I+ +    L++ F EEEV  AV   G+ KSPGPDGF+   F+  W I+K D+M ++ +F N G+
Subjt:  LISAGDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNSGV

Query:  INATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFD
        INA  NET+ICLIPKK ++  VSD+RPISL+   YK++++VL++RLR VL  TI+  Q AFV  RQILDA+LIANEV+++     K G+V K+DLEKA+D
Subjt:  INATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFD

Query:  KVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------------------
         V+W F+D VL  KG G +WR+WIRGC+ + N+S++INGRPR                                                          
Subjt:  KVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------------------

Query:  ------------------------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAF
                                                                                GGNP+ + FW PV+EK+E +L  WK A 
Subjt:  ------------------------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAF

Query:  ISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILEFEI------WL---------LW--
        +SKGGR T+IQA L SIPIYY+SLF++PI VA  +EKL+R F WEG  G    H ++WE        GGL +  L          WL         LW  
Subjt:  ISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILEFEI------WL---------LW--

Query:  ---------LNGFG--------------------NSYINGILF----------------------EAYPRLFRLTTRSTAMVDQVWNSSN--AGWDLGLR
                  NG+                     N ++ G +F                      E +PRLF L+ +    +    +S      WD G R
Subjt:  ---------LNGFG--------------------NSYINGILF----------------------EAYPRLFRLTTRSTAMVDQVWNSSN--AGWDLGLR

Query:  RNLNDLEVIEWTSLSHILSSVTI-QSVNDSWCWPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLT
        RNLN+LE+ E   L  +L  V +  S  D   W  D S  F+  S  S +    +      Y ++WK   P K+KIF+W+   G +NT D LQ+R P+L 
Subjt:  RNLNDLEVIEWTSLSHILSSVTI-QSVNDSWCWPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLT

Query:  LSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDY------------VFTGHPFHGVKKILWLSINRVFF
        +SP  C +C  A ++  HL +HC ++ K W  +        ++P   + +               V  G     V   LWL  NR  F
Subjt:  LSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDY------------VFTGHPFHGVKKILWLSINRVFF

BBN67784.1 VIRB2-interacting protein 2 [Prunus dulcis]2.5e-10531.98Show/hide
Query:  LISAGDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNSGV
        ++S G+IE E I F+K LY+ + +  +    L+W+ I+ +    L++ F EEEV  AV   G+ KSPGPDGF+   F+  W I+K D+M ++ +F N G+
Subjt:  LISAGDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNSGV

Query:  INATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFD
        INA  NET+ICLIPKK ++  VSD+RPISL+   YK++++VL++RLR VL  TI+  Q AFV  RQILDA+LIANEV+++     K G+V K+DLEKA+D
Subjt:  INATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFD

Query:  KVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------------------
         V+W F+D VL  KG G +WR+WIRGC+ + N+S++INGRPR                                                          
Subjt:  KVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------------------

Query:  ------------------------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAF
                                                                                GGNP+ + FW PV+EK+E +L  WK A 
Subjt:  ------------------------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAF

Query:  ISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILEFEI------WL---------LW--
        +SKGGR T+IQA L SIPIYY+SLF++PI VA  +EKL+R F WEG  G    H ++WE        GGL +  L          WL         LW  
Subjt:  ISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILEFEI------WL---------LW--

Query:  ---------LNGFG--------------------NSYINGILF----------------------EAYPRLFRLTTRSTAMVDQVWNSSN--AGWDLGLR
                  NG+                     N ++ G +F                      E +PRLF L+ +    +    +S      WD G R
Subjt:  ---------LNGFG--------------------NSYINGILF----------------------EAYPRLFRLTTRSTAMVDQVWNSSN--AGWDLGLR

Query:  RNLNDLEVIEWTSLSHILSSVTI-QSVNDSWCWPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLT
        RNLN+LE+ E   L  +L  V +  S  D   W  D S  F+  S  S +    +      Y ++WK   P K+KIF+W+   G +NT D LQ+R P+L 
Subjt:  RNLNDLEVIEWTSLSHILSSVTI-QSVNDSWCWPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLT

Query:  LSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDY------------VFTGHPFHGVKKILWLSINRVFF
        +SP  C +C  A ++  HL +HC ++ K W  +        ++P   + +               V  G     V   LWL  NR  F
Subjt:  LSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDY------------VFTGHPFHGVKKILWLSINRVFF

BBN69274.1 TatD related DNase [Prunus dulcis]4.7e-10432.75Show/hide
Query:  DIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNSGVINATL
        +IE+E I F+K L++ +    +    L+W PI+      LE+ F  EEV  AV   G  KSPGPDGF+  FF+  W ++K D+M ++++F  SG++N   
Subjt:  DIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNSGVINATL

Query:  NETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFDKVDWD
        NET+ICLIPKK ++  V+D+RPISL+   YK+I++VL++RLR VL +TI++ Q AFV  RQILDA L+ANEV+++     +KG+V K+D EKA+D V+W 
Subjt:  NETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFDKVDWD

Query:  FLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR---------------------------------------------------------------
        F+D V+  KG G+KWR WI GC+ S N+SI+ING+PR                                                               
Subjt:  FLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR---------------------------------------------------------------

Query:  -------------------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAFISKGG
                                                                           GGNP+ ++FW PV++K+EK+L  WK A +SKGG
Subjt:  -------------------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAFISKGG

Query:  RHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILE---------------FEIWLLW-------
        R TLIQA LSSIP YY+SLFK+PI V   +E+L+R F WEG       H + W         GGL I  L                 E   LW       
Subjt:  RHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILE---------------FEIWLLW-------

Query:  ----LNGFGNSYIN------------------------------------------GILFEAYPRLFRLTTRSTAMVDQVWNSSN----AGWDLGLRRNL
             NG+    I+                                          GIL + +PRL+ L+ R    +   W ++N      WD   RRNL
Subjt:  ----LNGFGNSYIN------------------------------------------GILFEAYPRLFRLTTRSTAMVDQVWNSSN----AGWDLGLRRNL

Query:  NDLEVIEWTSLSHILSSVTI-QSVNDSWCWPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLTLSP
        ++ E+ E   L  IL +V +  S  D   W ++   SFS KS  S  L    S     Y  +WK   P KI+ F+W  ++G INT D +Q+R P + LSP
Subjt:  NDLEVIEWTSLSHILSSVTI-QSVNDSWCWPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLTLSP

Query:  SCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGIL
        S CV C    EN  HLF+HC Y+ K W  M +A G   ++P   + +L
Subjt:  SCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGIL

BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]2.5e-10531.98Show/hide
Query:  LISAGDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNSGV
        ++S G+IE E I F+K LY+ + +  +    L+W+ I+ +    L++ F EEEV  AV   G+ KSPGPDGF+   F+  W I+K D+M ++ +F N G+
Subjt:  LISAGDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNSGV

Query:  INATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFD
        INA  NET+ICLIPKK ++  VSD+RPISL+   YK++++VL++RLR VL  TI+  Q AFV  RQILDA+LIANEV+++     K G+V K+DLEKA+D
Subjt:  INATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFD

Query:  KVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------------------
         V+W F+D VL  KG G +WR+WIRGC+ + N+S++INGRPR                                                          
Subjt:  KVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------------------

Query:  ------------------------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAF
                                                                                GGNP+ + FW PV+EK+E +L  WK A 
Subjt:  ------------------------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAF

Query:  ISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILEFEI------WL---------LW--
        +SKGGR T+IQA L SIPIYY+SLF++PI VA  +EKL+R F WEG  G    H ++WE        GGL +  L          WL         LW  
Subjt:  ISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILEFEI------WL---------LW--

Query:  ---------LNGFG--------------------NSYINGILF----------------------EAYPRLFRLTTRSTAMVDQVWNSSN--AGWDLGLR
                  NG+                     N ++ G +F                      E +PRLF L+ +    +    +S      WD G R
Subjt:  ---------LNGFG--------------------NSYINGILF----------------------EAYPRLFRLTTRSTAMVDQVWNSSN--AGWDLGLR

Query:  RNLNDLEVIEWTSLSHILSSVTI-QSVNDSWCWPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLT
        RNLN+LE+ E   L  +L  V +  S  D   W  D S  F+  S  S +    +      Y ++WK   P K+KIF+W+   G +NT D LQ+R P+L 
Subjt:  RNLNDLEVIEWTSLSHILSSVTI-QSVNDSWCWPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLT

Query:  LSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDY------------VFTGHPFHGVKKILWLSINRVFF
        +SP  C +C  A ++  HL +HC ++ K W  +        ++P   + +               V  G     V   LWL  NR  F
Subjt:  LSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDY------------VFTGHPFHGVKKILWLSINRVFF

KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.1e-10833.21Show/hide
Query:  ITEVLSRDNVSLISAGDIEKEFIAFYKALYTKDSKL-RFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDI
        I E+   + +   S   I   FI F+  ++   +K   F   NL+W+PI     ++L   F E+E+   + SL   K+PGPDGF   FFK  W+++K DI
Subjt:  ITEVLSRDNVSLISAGDIEKEFIAFYKALYTKDSKL-RFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDI

Query:  MTMIREFHNSGVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKG
        M + ++F++ GVIN  +N TYI LIPKK D  +  D+RPISL    YKIIA+ LSNRL+  LP+TI+ENQ+AFV NRQI DA L+ANE +D W + K KG
Subjt:  MTMIREFHNSGVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKG

Query:  VVLKLDLEKAFDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------
         +LKLD+EKAFD ++WDF+D VL+ K   + WR WIRGCIS+V YSII+NGRP+                                              
Subjt:  VVLKLDLEKAFDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------

Query:  -----------------------------------------------------------------------------------GGNPKNVSFWQPVIEKI
                                                                                           GGNPK+  FW  V EKI
Subjt:  -----------------------------------------------------------------------------------GGNPKNVSFWQPVIEKI

Query:  EKKLHGWKYAFISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNI--------AILEFEIW-
        +KKL+ WKYA ISKGGR TLI++TLSS+P Y LS+F+ P    K +EK  R F W+G+  + G H INW         GGL I        A+L   +W 
Subjt:  EKKLHGWKYAFISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNI--------AILEFEIW-

Query:  ------LLWL-----------------------------------------------NG------FGNSYINGILFEAYPRLFRLTTRSTAMVDQVWNSS
               LW                                                NG      + N  I G L  AYPRLF L+      V   WN+ 
Subjt:  ------LLWL-----------------------------------------------NG------FGNSYINGILFEAYPRLFRLTTRSTAMVDQVWNSS

Query:  NAGWDLGLRRNLNDLEVIEWTSLSHILSSVTIQSVNDSWCWPLDHSKSFSV---KSLMSDMLTDCDSTPSNFYLE-LWKDVYPNKIKIFLWELSHGGINT
        +  W +  RR LND E  +W  +  IL      S +    W  D   SFS+   K L+S  L      P +  LE +WK   P KIK F+W L    INT
Subjt:  NAGWDLGLRRNLNDLEVIEWTSLSHILSSVTIQSVNDSWCWPLDHSKSFSV---KSLMSDMLTDCDSTPSNFYLE-LWKDVYPNKIKIFLWELSHGGINT

Query:  ADQLQKRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDYVFTGHPFHGVKKILWLSINRVFFCYAC
         + +Q RMP++ L PS CV+C    E+  HLF+HC      W  ++NAF  SL L  +    + +  + H F   +K+++  I  +F+   C
Subjt:  ADQLQKRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDYVFTGHPFHGVKKILWLSINRVFFCYAC

TrEMBL top hitse value%identityAlignment
A0A4Y1R3V4 VIRB2-interacting protein 21.2e-10531.98Show/hide
Query:  LISAGDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNSGV
        ++S G+IE E I F+K LY+ + +  +    L+W+ I+ +    L++ F EEEV  AV   G+ KSPGPDGF+   F+  W I+K D+M ++ +F N G+
Subjt:  LISAGDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNSGV

Query:  INATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFD
        INA  NET+ICLIPKK ++  VSD+RPISL+   YK++++VL++RLR VL  TI+  Q AFV  RQILDA+LIANEV+++     K G+V K+DLEKA+D
Subjt:  INATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFD

Query:  KVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------------------
         V+W F+D VL  KG G +WR+WIRGC+ + N+S++INGRPR                                                          
Subjt:  KVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------------------

Query:  ------------------------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAF
                                                                                GGNP+ + FW PV+EK+E +L  WK A 
Subjt:  ------------------------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAF

Query:  ISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILEFEI------WL---------LW--
        +SKGGR T+IQA L SIPIYY+SLF++PI VA  +EKL+R F WEG  G    H ++WE        GGL +  L          WL         LW  
Subjt:  ISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILEFEI------WL---------LW--

Query:  ---------LNGFG--------------------NSYINGILF----------------------EAYPRLFRLTTRSTAMVDQVWNSSN--AGWDLGLR
                  NG+                     N ++ G +F                      E +PRLF L+ +    +    +S      WD G R
Subjt:  ---------LNGFG--------------------NSYINGILF----------------------EAYPRLFRLTTRSTAMVDQVWNSSN--AGWDLGLR

Query:  RNLNDLEVIEWTSLSHILSSVTI-QSVNDSWCWPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLT
        RNLN+LE+ E   L  +L  V +  S  D   W  D S  F+  S  S +    +      Y ++WK   P K+KIF+W+   G +NT D LQ+R P+L 
Subjt:  RNLNDLEVIEWTSLSHILSSVTI-QSVNDSWCWPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLT

Query:  LSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDY------------VFTGHPFHGVKKILWLSINRVFF
        +SP  C +C  A ++  HL +HC ++ K W  +        ++P   + +               V  G     V   LWL  NR  F
Subjt:  LSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDY------------VFTGHPFHGVKKILWLSINRVFF

A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein5.2e-10933.21Show/hide
Query:  ITEVLSRDNVSLISAGDIEKEFIAFYKALYTKDSKL-RFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDI
        I E+   + +   S   I   FI F+  ++   +K   F   NL+W+PI     ++L   F E+E+   + SL   K+PGPDGF   FFK  W+++K DI
Subjt:  ITEVLSRDNVSLISAGDIEKEFIAFYKALYTKDSKL-RFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDI

Query:  MTMIREFHNSGVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKG
        M + ++F++ GVIN  +N TYI LIPKK D  +  D+RPISL    YKIIA+ LSNRL+  LP+TI+ENQ+AFV NRQI DA L+ANE +D W + K KG
Subjt:  MTMIREFHNSGVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKG

Query:  VVLKLDLEKAFDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------
         +LKLD+EKAFD ++WDF+D VL+ K   + WR WIRGCIS+V YSII+NGRP+                                              
Subjt:  VVLKLDLEKAFDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------

Query:  -----------------------------------------------------------------------------------GGNPKNVSFWQPVIEKI
                                                                                           GGNPK+  FW  V EKI
Subjt:  -----------------------------------------------------------------------------------GGNPKNVSFWQPVIEKI

Query:  EKKLHGWKYAFISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNI--------AILEFEIW-
        +KKL+ WKYA ISKGGR TLI++TLSS+P Y LS+F+ P    K +EK  R F W+G+  + G H INW         GGL I        A+L   +W 
Subjt:  EKKLHGWKYAFISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNI--------AILEFEIW-

Query:  ------LLWL-----------------------------------------------NG------FGNSYINGILFEAYPRLFRLTTRSTAMVDQVWNSS
               LW                                                NG      + N  I G L  AYPRLF L+      V   WN+ 
Subjt:  ------LLWL-----------------------------------------------NG------FGNSYINGILFEAYPRLFRLTTRSTAMVDQVWNSS

Query:  NAGWDLGLRRNLNDLEVIEWTSLSHILSSVTIQSVNDSWCWPLDHSKSFSV---KSLMSDMLTDCDSTPSNFYLE-LWKDVYPNKIKIFLWELSHGGINT
        +  W +  RR LND E  +W  +  IL      S +    W  D   SFS+   K L+S  L      P +  LE +WK   P KIK F+W L    INT
Subjt:  NAGWDLGLRRNLNDLEVIEWTSLSHILSSVTIQSVNDSWCWPLDHSKSFSV---KSLMSDMLTDCDSTPSNFYLE-LWKDVYPNKIKIFLWELSHGGINT

Query:  ADQLQKRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDYVFTGHPFHGVKKILWLSINRVFFCYAC
         + +Q RMP++ L PS CV+C    E+  HLF+HC      W  ++NAF  SL L  +    + +  + H F   +K+++  I  +F+   C
Subjt:  ADQLQKRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGILDYVFTGHPFHGVKKILWLSINRVFFCYAC

M5WKV4 Reverse transcriptase domain-containing protein (Fragment)2.4e-10633.91Show/hide
Query:  IEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNSGVINATLN
        IE+E I F+K LY+ +  + +    L+W PI+      LE+ F  EEV  AV   G  KSPGPDGF+  FF+  W ++K D+M ++++F  SG++N   N
Subjt:  IEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNSGVINATLN

Query:  ETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFDKVDWDF
        ET+ICLIPKK ++  V+DYRPISL+   YK+I++VL++RLR VL +TI+++Q AFV  RQILDA L+ANEV+++    K+KG+V K+D EKA+D V+W+F
Subjt:  ETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFDKVDWDF

Query:  LDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------------------------
        +D VL  KG G KWR WI GC+ SVN+SI+ING+PR                                                                
Subjt:  LDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR----------------------------------------------------------------

Query:  ------------------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAFISKGGR
                                                                          GGNP+ ++FW PV++K+EK+L  WK A +SKGGR
Subjt:  ------------------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAFISKGGR

Query:  HTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILEFE------IWL---------LW--------
         TLIQA LSSIP YY+SLFK+PI VA  +E+L+R F WEG       H + WE        GGL I  L          WL         LW        
Subjt:  HTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILEFE------IWL---------LW--------

Query:  ---LNGFG--------------------NSYI----------------------NGILFEAYPRLFRLTTRSTAMVDQVWNS--SNAGWDLGLRRNLNDL
            NG+                     NS++                       GIL + +PRL  L+ R    +    N+      WD   RRNL++ 
Subjt:  ---LNGFG--------------------NSYI----------------------NGILFEAYPRLFRLTTRSTAMVDQVWNS--SNAGWDLGLRRNLNDL

Query:  EVIEWTSLSHILSSVTIQ-SVNDSWCWPLDHSKSFSVKSLMSDML-TDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLTLSPSC
        E+ E   L  IL +V +  S  D   W +    SFS KS  S +L T  D  P   +  +WK   P KI+ F+W  ++G INT D +Q+R P + LSPS 
Subjt:  EVIEWTSLSHILSSVTIQ-SVNDSWCWPLDHSKSFSVKSLMSDML-TDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLTLSPSC

Query:  CVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGIL
        CV+C    EN  HLF+HC Y+ + W  M  A G   ++P   + +L
Subjt:  CVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGIL

M5WPQ5 Reverse transcriptase domain-containing protein1.2e-10834.99Show/hide
Query:  EVLSRDNVSLISA-GDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMT
        E L  +++ +I    +IE+E I F+K LY+++  + +    L+W PI+      LE+ F  EEV  AV   G  KSPGPDGF+  FF+  W ++K D+M 
Subjt:  EVLSRDNVSLISA-GDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMT

Query:  MIREFHNSGVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVV
        ++++F  SG++N   NET+ICLIPKK ++  V+DYRPISL+   YK+I++VL++RLR VL +TI+++Q AFV  RQILDA L+ANEV+++    K+KG+V
Subjt:  MIREFHNSGVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVV

Query:  LKLDLEKAFDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR------------------------------------------------
         K+D EKA+D V+W+F+D V+  KG G+KWR WI GC+ SVN+SI+ING+PR                                                
Subjt:  LKLDLEKAFDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR------------------------------------------------

Query:  --------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAFISKGGRHTLIQATLSS
                                                                GGNP+ ++FW PV+EK+EK+L  WK A +SKGGR TLIQA LSS
Subjt:  --------------------------------------------------------GGNPKNVSFWQPVIEKIEKKLHGWKYAFISKGGRHTLIQATLSS

Query:  IPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILE---------------FEIWLLW-----------LNGFG--
        IP YY+SLFK+PI VA  +E+L+R F WEG       H + WE        GGL I  L                 E   LW            NG+   
Subjt:  IPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILE---------------FEIWLLW-----------LNGFG--

Query:  ------------------NSYI----------------------NGILFEAYPRLFRLTTRSTAMVDQVWNSS--NAGWDLGLRRNLNDLEVIEWTSLSH
                          NS++                       GIL + +PRL  L+ R    +    N+      WD   RRNL++ E+ E   L  
Subjt:  ------------------NSYI----------------------NGILFEAYPRLFRLTTRSTAMVDQVWNSS--NAGWDLGLRRNLNDLEVIEWTSLSH

Query:  ILSSVTIQ-SVNDSWCWPLDHSKSFSVKSLMSDML-TDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLTLSPSCCVMCYSAPEN
        IL +V +  S  D   W ++   SFS KS  S +L T  D  P   +  +WK   P KI+ F+W  ++G INT D +Q+R P + LSPS CV+C    EN
Subjt:  ILSSVTIQ-SVNDSWCWPLDHSKSFSVKSLMSDML-TDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLTLSPSCCVMCYSAPEN

Query:  PCHLFVHCLYASKYWLIMKNAFG
          HLF+HC Y+ + W  M  A G
Subjt:  PCHLFVHCLYASKYWLIMKNAFG

M5X4S0 Reverse transcriptase domain-containing protein (Fragment)8.4e-10733.46Show/hide
Query:  EVLSRDNVSLISA-GDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMT
        E L  +++ +I    +IE+E I F+K LY+ +  + +    L+W PI+      LE+ F  EEV  AV   G  KSPGPDGF+  FF+  W ++K D+M 
Subjt:  EVLSRDNVSLISA-GDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMT

Query:  MIREFHNSGVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVV
        ++++F  SG++N   NET+ICLIPKK ++  V+DYRPISL+   YK+I++VL++RLR VL +TI+++Q AFV  RQILDA L+ANEV+++    K+KG+V
Subjt:  MIREFHNSGVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVV

Query:  LKLDLEKAFDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR------------------------------------------------
         K+D EKA+D V+W+F+D V+  KG G+KWR WI GC+ SVN+SI+ING+PR                                                
Subjt:  LKLDLEKAFDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPR------------------------------------------------

Query:  ----------------------------------------------------------------------------------GGNPKNVSFWQPVIEKIE
                                                                                          GGNP+ ++FW PV+EK+E
Subjt:  ----------------------------------------------------------------------------------GGNPKNVSFWQPVIEKIE

Query:  KKLHGWKYAFISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILE--------------
        K+L  WK A +SKGGR TLIQA LSSIP YY+SLFK+PI VA  +E+L+R F WEG       H + WE        GGL I  L               
Subjt:  KKLHGWKYAFISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILE--------------

Query:  -FEIWLLW-----------LNGFG--------------------NSYI----------------------NGILFEAYPRLFRLTTRSTAMVDQVWNSS-
          E   LW            NG+                     NS++                       GIL + +PRL  L+ R    +    N+  
Subjt:  -FEIWLLW-----------LNGFG--------------------NSYI----------------------NGILFEAYPRLFRLTTRSTAMVDQVWNSS-

Query:  -NAGWDLGLRRNLNDLEVIEWTSLSHILSSVTIQ-SVNDSWCWPLDHSKSFSVKSLMSDML-TDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTA
            WD   RRNL++ E+ E   L  IL +V +  S  D   W ++   SFS KS  S +L T  D  P   +  +WK   P KI+ F+W  ++G INT 
Subjt:  -NAGWDLGLRRNLNDLEVIEWTSLSHILSSVTIQ-SVNDSWCWPLDHSKSFSVKSLMSDML-TDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTA

Query:  DQLQKRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGIL
        D +Q+R P + LSPS CV+C    EN  HLF+HC Y+ + W  M  A G   ++P   + +L
Subjt:  DQLQKRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGWSLILPNNIYGIL

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein4.7e-2228.4Show/hide
Query:  DIEKEFIAFYKALY-TKDSKLRFLPTNLD---WSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFF-KHSWHIIKFDIMTMIREFHNSGV
        +I+     +YK LY  K   L  + T LD      +N + V  L +  T  E+   + SL   KSPGPDGFTAEF+ ++   ++ F ++ + +     G+
Subjt:  DIEKEFIAFYKALY-TKDSKLRFLPTNLD---WSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFF-KHSWHIIKFDIMTMIREFHNSGV

Query:  INATLNETYICLIPKK-LDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKG-VVLKLDLEKA
        +  +  E  I LIPK   D     ++RPISL+    KI+ ++L+NR++  +   I  +Q+ F+   Q       +  VI   N +K K  V++ +D EKA
Subjt:  INATLNETYICLIPKK-LDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKG-VVLKLDLEKA

Query:  FDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGR----------PRGGNPKNVSFWQPVIEKIEKKLHGWKYAFISKGGRHTLIQATLSSIP
        FDK+   F+   L   G    +   IR        +II+NG+           R G P +   +  V+E + + +   K     + G+  +  +  +   
Subjt:  FDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGR----------PRGGNPKNVSFWQPVIEKIEKKLHGWKYAFISKGGRHTLIQATLSSIP

Query:  IYYLSLFKLPIKVAKILEKLIRYF
        I YL   + PI  A+ L KLI  F
Subjt:  IYYLSLFKLPIKVAKILEKLIRYF

P08548 LINE-1 reverse transcriptase homolog1.4e-1827.24Show/hide
Query:  MITEVLSRDNVSLISAGDIEKEFIAFYKALYT-KDSKLRFLPTNLD---WSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHII
        +I+ + + ++       +I+K    +YK LY+ K   L+ +   L+      ++   V  L +  +  E+   +++L   KSPGPDGFT+EF++     +
Subjt:  MITEVLSRDNVSLISAGDIEKEFIAFYKALYT-KDSKLRFLPTNLD---WSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHII

Query:  KFDIMTMIREFHNSGVINATLNETYICLIPKK-LDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWN-
           ++ + +     G++  T  E  I LIPK   D     +YRPISL+    KI+ ++L+NR++  +   I  +Q+ F+   Q       +  VI   N 
Subjt:  KFDIMTMIREFHNSGVINATLNETYICLIPKK-LDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWN-

Query:  ISKKKGVVLKLDLEKAFDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIING
        +  K  ++L +D EKAFD +   F+   LK  G    +   I    S    +II+NG
Subjt:  ISKKKGVVLKLDLEKAFDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIING

P0C2F6 Putative ribonuclease H protein At1g657502.2e-1121.14Show/hide
Query:  VIEKIEKKLHGWKYAFISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILEF-------
        ++E++  ++ GW+   +S  GR TL +A LSS+P++ +S   LP  +   L++L R F W  +      H + W     P   GGL +   +        
Subjt:  VIEKIEKKLHGWKYAFISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSRGNGGMHNINWETTQLPILLGGLNIAILEF-------

Query:  -----------EIWLL-------------------------------------------WLNGFG-------NSYINGILFEAYPRLFRLTTRSTAMVDQ
                    +W L                                           W+ G G       + +++G          R T   T +   
Subjt:  -----------EIWLL-------------------------------------------WLNGFG-------NSYINGILFEAYPRLFRLTTRSTAMVDQ

Query:  VWNSSNAGWDLG----LRRNLNDLEVIEWTSLSHILSSVTIQSVNDSWCWPLDHSKSFSVKSLMSDMLTDCDSTP--SNFYLELWKDVYPNKIKIFLWEL
        +W     GWD         N   LE+      + +L  VT     D   W       FSV+S    +  D    P  ++F+  LWK   P ++K FLW +
Subjt:  VWNSSNAGWDLG----LRRNLNDLEVIEWTSLSHILSSVTIQSVNDSWCWPLDHSKSFSVKSLMSDMLTDCDSTP--SNFYLELWKDVYPNKIKIFLWEL

Query:  SHGGINTADQLQKRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWL
         +  + T ++  +R  HL+ S + C +C    E+  H+   C      W+
Subjt:  SHGGINTADQLQKRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWL

P11369 LINE-1 retrotransposable element ORF2 protein5.2e-2128.57Show/hide
Query:  DIEKEFIAFYKALY-TKDSKLRFLPTNLD---WSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIRE-FHN---
        +I+    +FYK LY TK   L  +   LD      +N D V  L    + +E+   + SL   KSPGPDGF+AEF++      K D++ ++ + FH    
Subjt:  DIEKEFIAFYKALY-TKDSKLRFLPTNLD---WSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIRE-FHN---

Query:  SGVINATLNETYICLIPK-KLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWN-ISKKKGVVLKLDL
         G +  +  E  I LIPK + D   + ++RPISL+    KI+ ++L+NR++  +   I  +Q+ F+   Q       +  VI   N +  K  +++ LD 
Subjt:  SGVINATLNETYICLIPK-KLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWN-ISKKKGVVLKLDL

Query:  EKAFDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGR----------PRGGNPKNVSFWQPVIEKIEKKLHGWKYAFISKGGRHTLIQATLS
        EKAFDK+   F+  VL+  G    + N I+   S    +I +NG            R G P +   +  V+E + + +   K     + G+  +  + L+
Subjt:  EKAFDKVDWDFLDAVLKAKGSGLKWRNWIRGCISSVNYSIIINGR----------PRGGNPKNVSFWQPVIEKIEKKLHGWKYAFISKGGRHTLIQATLS

Query:  SIPIYYLS
           I Y+S
Subjt:  SIPIYYLS

P14381 Transposon TX1 uncharacterized 149 kDa protein6.1e-2227.03Show/hide
Query:  ITEVLSRDNVSLISAGDIEKEFIAFYKALYTKDSKLRFLPTNL-DWSPINGDMVVD-LEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFD
        IT + + D   L     I     +FY+ L++ D         L D  P+  +   + LE   T +E+  A++ +  +KSPG DG T EFF+  W  +  D
Subjt:  ITEVLSRDNVSLISAGDIEKEFIAFYKALYTKDSKLRFLPTNL-DWSPINGDMVVD-LEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFD

Query:  IMTMIREFHNSGVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKK
           ++ E    G +  +     + L+PKK D + + ++RP+SL+   YKI+A+ +S RL+ VL   I  +Q   V  R I D   +  +++   + +++ 
Subjt:  IMTMIREFHNSGVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKK

Query:  GV---VLKLDLEKAFDKVDWDFLDAVLKAKGSGLKWRNWIR------GCISSVNYSI---------IINGRPRGGNPKNVSFWQPVIEKIEKKLHG
        G+    L LD EKAFD+VD  +L   L+A   G ++  +++       C+  +N+S+         +  G P  G   +++  +P +  + K+L G
Subjt:  GV---VLKLDLEKAFDKVDWDFLDAVLKAKGSGLKWRNWIR------GCISSVNYSI---------IINGRPRGGNPKNVSFWQPVIEKIEKKLHG

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.3e-1431.76Show/hide
Query:  DNVSLISAGDIEKEFIAFYKALYTKDSKLRFLPTNL----DWSPI--NGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMT
        D+V + +   +++  +A+Y  L   DS +   P ++    D  P   N  +   L    +++E+  AV ++  +K+PGPD FTAEFF  SW ++K   + 
Subjt:  DNVSLISAGDIEKEFIAFYKALYTKDSKLRFLPTNL----DWSPI--NGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMT

Query:  MIREFHNSGVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKII
         ++EF  +G +    N T I LIPK      +S +RP+S     YKII
Subjt:  MIREFHNSGVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKII

AT3G25270.1 Ribonuclease H-like superfamily protein8.2e-0638.81Show/hide
Query:  ELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYW
        ++WK     KIK FLW+L  G + T D L++R  H+   P  C  C    E   HLF  C YA + W
Subjt:  ELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYW

AT4G20520.1 RNA binding;RNA-directed DNA polymerases7.0e-0533.75Show/hide
Query:  RLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGV----VLKLDLEKAFDKVDWDFLDAVLKAKGSGLKW
        RL+ ++ + I   Q +F+  R   D  +   E +   ++ +KKGV    +LKLDLEKA+D++ WD+L+  L + G    W
Subjt:  RLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGV----VLKLDLEKAFDKVDWDFLDAVLKAKGSGLKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACTGAAGTTCTATCTCGTGACAATGTTAGCTTAATCTCAGCTGGGGATATTGAGAAGGAGTTTATTGCTTTTTATAAAGCGCTTTATACCAAAGACAGTAAATT
GCGTTTCCTCCCTACAAACTTAGATTGGAGTCCTATTAATGGGGATATGGTTGTTGATTTAGAAAAAGATTTTACAGAGGAGGAAGTCTACTGTGCGGTCAAATCCTTGG
GTGTAAGTAAATCTCCAGGTCCTGACGGTTTTACAGCTGAATTCTTTAAGCATTCTTGGCATATTATTAAATTTGATATTATGACCATGATTAGAGAATTTCATAACTCA
GGTGTTATTAACGCAACCTTAAATGAAACCTATATTTGCTTAATCCCAAAGAAACTAGATGCTAAATCAGTGTCAGACTATCGTCCTATTAGCCTTATCCCCTGTGCCTA
CAAGATTATTGCTAGAGTCTTGTCTAACAGGTTAAGGTTTGTTCTGCCTCATACTATTGCTGAAAATCAAATGGCCTTTGTAGTCAATAGACAAATCCTGGATGCTTCTC
TAATTGCCAATGAAGTGATTGATGACTGGAATATCTCTAAAAAGAAAGGTGTGGTTCTTAAATTGGACCTGGAAAAGGCTTTTGATAAAGTAGATTGGGATTTTCTAGAT
GCGGTTTTGAAGGCTAAAGGTTCCGGCTTAAAATGGAGGAATTGGATTCGAGGTTGTATCTCTTCAGTTAACTACTCGATAATTATCAATGGAAGACCTCGAGGTGGTAA
TCCAAAGAATGTGTCCTTTTGGCAACCAGTGATTGAAAAAATTGAGAAAAAGCTTCATGGTTGGAAATATGCATTTATCTCGAAAGGTGGTAGACATACGCTCATTCAAG
CTACTCTCTCAAGTATACCCATTTACTATCTTTCCTTGTTTAAGCTCCCGATCAAGGTTGCCAAAATTTTGGAGAAGCTTATTAGATATTTTTTCTGGGAAGGATCTCGA
GGAAATGGTGGTATGCATAACATTAATTGGGAGACAACACAGCTCCCTATTCTTTTGGGTGGTTTGAATATTGCCATTTTAGAATTTGAAATATGGCTCTTATGGCTAAA
TGGATTTGGAAATTCTTACATAAACGGGATTCTCTTTGAAGCATATCCAAGACTATTTCGATTAACTACCAGATCTACTGCTATGGTGGACCAAGTCTGGAATAGTTCCA
ATGCGGGTTGGGATTTGGGACTTAGACGTAATCTAAATGATTTGGAGGTAATTGAATGGACTAGTCTCTCTCATATTCTTTCATCTGTTACGATTCAATCGGTGAATGAC
TCATGGTGTTGGCCTCTTGATCATTCTAAGAGTTTTTCTGTCAAATCTCTTATGTCTGATATGCTTACTGATTGTGATTCCACACCATCCAATTTTTACTTGGAGCTTTG
GAAAGATGTCTATCCTAATAAAATCAAAATTTTTCTATGGGAGCTTAGCCATGGAGGTATTAATACGGCAGATCAATTGCAAAAGAGAATGCCTCATCTGACTCTCTCTC
CATCTTGTTGTGTGATGTGTTATTCTGCCCCAGAAAATCCTTGTCATCTTTTTGTTCACTGCCTTTATGCCTCTAAATACTGGTTAATCATGAAGAATGCCTTTGGTTGG
TCCTTGATCTTGCCCAACAATATTTATGGAATTCTCGACTATGTGTTTACGGGACACCCATTTCATGGTGTGAAAAAAATCTTATGGTTATCTATTAACAGAGTATTCTT
CTGTTATGCTTGCTCGGGCCTTCTTAATAGCATCACCATTTACTACTTTTCTCTACTGAAAGCCCCCTTCCTTGAAAGTAGTGGAGAATCTAGAAAGGCAGATAAGAAAT
TTTATTTGGAGTGGAGGAAGCTACTCCCCAAGGGAGAGGGAGCCATCTGGTTAGATGGCCTGGATCTCTTTACCTTCCTGACATGGGGGGATAGGAGTGGGGTCCCTAAA
GCAAAGGAACACAGTTCTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTACTGAAGTTCTATCTCGTGACAATGTTAGCTTAATCTCAGCTGGGGATATTGAGAAGGAGTTTATTGCTTTTTATAAAGCGCTTTATACCAAAGACAGTAAATT
GCGTTTCCTCCCTACAAACTTAGATTGGAGTCCTATTAATGGGGATATGGTTGTTGATTTAGAAAAAGATTTTACAGAGGAGGAAGTCTACTGTGCGGTCAAATCCTTGG
GTGTAAGTAAATCTCCAGGTCCTGACGGTTTTACAGCTGAATTCTTTAAGCATTCTTGGCATATTATTAAATTTGATATTATGACCATGATTAGAGAATTTCATAACTCA
GGTGTTATTAACGCAACCTTAAATGAAACCTATATTTGCTTAATCCCAAAGAAACTAGATGCTAAATCAGTGTCAGACTATCGTCCTATTAGCCTTATCCCCTGTGCCTA
CAAGATTATTGCTAGAGTCTTGTCTAACAGGTTAAGGTTTGTTCTGCCTCATACTATTGCTGAAAATCAAATGGCCTTTGTAGTCAATAGACAAATCCTGGATGCTTCTC
TAATTGCCAATGAAGTGATTGATGACTGGAATATCTCTAAAAAGAAAGGTGTGGTTCTTAAATTGGACCTGGAAAAGGCTTTTGATAAAGTAGATTGGGATTTTCTAGAT
GCGGTTTTGAAGGCTAAAGGTTCCGGCTTAAAATGGAGGAATTGGATTCGAGGTTGTATCTCTTCAGTTAACTACTCGATAATTATCAATGGAAGACCTCGAGGTGGTAA
TCCAAAGAATGTGTCCTTTTGGCAACCAGTGATTGAAAAAATTGAGAAAAAGCTTCATGGTTGGAAATATGCATTTATCTCGAAAGGTGGTAGACATACGCTCATTCAAG
CTACTCTCTCAAGTATACCCATTTACTATCTTTCCTTGTTTAAGCTCCCGATCAAGGTTGCCAAAATTTTGGAGAAGCTTATTAGATATTTTTTCTGGGAAGGATCTCGA
GGAAATGGTGGTATGCATAACATTAATTGGGAGACAACACAGCTCCCTATTCTTTTGGGTGGTTTGAATATTGCCATTTTAGAATTTGAAATATGGCTCTTATGGCTAAA
TGGATTTGGAAATTCTTACATAAACGGGATTCTCTTTGAAGCATATCCAAGACTATTTCGATTAACTACCAGATCTACTGCTATGGTGGACCAAGTCTGGAATAGTTCCA
ATGCGGGTTGGGATTTGGGACTTAGACGTAATCTAAATGATTTGGAGGTAATTGAATGGACTAGTCTCTCTCATATTCTTTCATCTGTTACGATTCAATCGGTGAATGAC
TCATGGTGTTGGCCTCTTGATCATTCTAAGAGTTTTTCTGTCAAATCTCTTATGTCTGATATGCTTACTGATTGTGATTCCACACCATCCAATTTTTACTTGGAGCTTTG
GAAAGATGTCTATCCTAATAAAATCAAAATTTTTCTATGGGAGCTTAGCCATGGAGGTATTAATACGGCAGATCAATTGCAAAAGAGAATGCCTCATCTGACTCTCTCTC
CATCTTGTTGTGTGATGTGTTATTCTGCCCCAGAAAATCCTTGTCATCTTTTTGTTCACTGCCTTTATGCCTCTAAATACTGGTTAATCATGAAGAATGCCTTTGGTTGG
TCCTTGATCTTGCCCAACAATATTTATGGAATTCTCGACTATGTGTTTACGGGACACCCATTTCATGGTGTGAAAAAAATCTTATGGTTATCTATTAACAGAGTATTCTT
CTGTTATGCTTGCTCGGGCCTTCTTAATAGCATCACCATTTACTACTTTTCTCTACTGAAAGCCCCCTTCCTTGAAAGTAGTGGAGAATCTAGAAAGGCAGATAAGAAAT
TTTATTTGGAGTGGAGGAAGCTACTCCCCAAGGGAGAGGGAGCCATCTGGTTAGATGGCCTGGATCTCTTTACCTTCCTGACATGGGGGGATAGGAGTGGGGTCCCTAAA
GCAAAGGAACACAGTTCTCCTTAA
Protein sequenceShow/hide protein sequence
MITEVLSRDNVSLISAGDIEKEFIAFYKALYTKDSKLRFLPTNLDWSPINGDMVVDLEKDFTEEEVYCAVKSLGVSKSPGPDGFTAEFFKHSWHIIKFDIMTMIREFHNS
GVINATLNETYICLIPKKLDAKSVSDYRPISLIPCAYKIIARVLSNRLRFVLPHTIAENQMAFVVNRQILDASLIANEVIDDWNISKKKGVVLKLDLEKAFDKVDWDFLD
AVLKAKGSGLKWRNWIRGCISSVNYSIIINGRPRGGNPKNVSFWQPVIEKIEKKLHGWKYAFISKGGRHTLIQATLSSIPIYYLSLFKLPIKVAKILEKLIRYFFWEGSR
GNGGMHNINWETTQLPILLGGLNIAILEFEIWLLWLNGFGNSYINGILFEAYPRLFRLTTRSTAMVDQVWNSSNAGWDLGLRRNLNDLEVIEWTSLSHILSSVTIQSVND
SWCWPLDHSKSFSVKSLMSDMLTDCDSTPSNFYLELWKDVYPNKIKIFLWELSHGGINTADQLQKRMPHLTLSPSCCVMCYSAPENPCHLFVHCLYASKYWLIMKNAFGW
SLILPNNIYGILDYVFTGHPFHGVKKILWLSINRVFFCYACSGLLNSITIYYFSLLKAPFLESSGESRKADKKFYLEWRKLLPKGEGAIWLDGLDLFTFLTWGDRSGVPK
AKEHSSP