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Lag0027728 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027728
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncoiled-coil domain-containing protein SCD2
Genome locationchr8:4127105..4127936
RNA-Seq ExpressionLag0027728
SyntenyLag0027728
Gene Ontology termsGO:0000911 - cytokinesis by cell plate formation (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055354.1 coiled-coil domain-containing protein SCD2 [Cucumis melo var. makuwa]4.3e-1091.89Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE
        F  RAKAYGVDEDVADERLQFWISRSGQPPTSHDAV+
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE

KAG6584171.1 Coiled-coil domain-containing protein SCD2, partial [Cucurbita argyrosperma subsp. sororia]4.3e-1091.89Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE
        F  RAKAYGVDEDVADERLQFWISRSGQPPTSHDAV+
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE

KAG7019762.1 Coiled-coil domain-containing protein SCD2 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-1091.89Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE
        F  RAKAYGVDEDVADERLQFWISRSGQPPTSHDAV+
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE

XP_023519742.1 coiled-coil domain-containing protein SCD2 isoform X3 [Cucurbita pepo subsp. pepo]4.3e-1091.89Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE
        F  RAKAYGVDEDVADERLQFWISRSGQPPTSHDAV+
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE

XP_038894537.1 coiled-coil domain-containing protein SCD2-like isoform X2 [Benincasa hispida]4.3e-1091.89Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE
        F  RAKAYGVDEDVADERLQFWISRSGQPPTSHDAV+
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE

TrEMBL top hitse value%identityAlignment
A0A0A0LRN8 Uncharacterized protein2.1e-1091.89Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE
        F  RAKAYGVDEDVADERLQFWISRSGQPPTSHDAV+
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE

A0A5A7UJN8 Coiled-coil domain-containing protein SCD22.1e-1091.89Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE
        F  RAKAYGVDEDVADERLQFWISRSGQPPTSHDAV+
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE

A0A5D3BHM3 Coiled-coil domain-containing protein SCD22.1e-1091.89Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE
        F  RAKAYGVDEDVADERLQFWISRSGQPPTSHDAV+
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE

A0A6J1KJI4 coiled-coil domain-containing protein SCD2-like isoform X12.1e-1091.89Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE
        F  RAKAYGVDEDVADERLQFWISRSGQPPTSHDAV+
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE

A0A6J1KRH4 coiled-coil domain-containing protein SCD2-like isoform X22.1e-1091.89Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE
        F  RAKAYGVDEDVADERLQFWISRSGQPPTSHDAV+
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE

SwissProt top hitse value%identityAlignment
Q8RWD5 Coiled-coil domain-containing protein SCD22.1e-0453.85Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSG--QPPTSHDAVE
        F  RAK +GV++D+A+ER+Q WISRS      TSHDA++
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSG--QPPTSHDAVE

Arabidopsis top hitse value%identityAlignment
AT3G48860.2 unknown protein1.5e-0553.85Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSG--QPPTSHDAVE
        F  RAK +GV++D+A+ER+Q WISRS      TSHDA++
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSG--QPPTSHDAVE

AT4G25070.1 unknown protein3.3e-0851.11Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVECGCGTKHV
        F  RAK +GV+ D+A+ERLQFWI+R GQ  +SHDA++   G + +
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVECGCGTKHV

AT4G25070.2 unknown protein3.3e-0851.11Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVECGCGTKHV
        F  RAK +GV+ D+A+ERLQFWI+R GQ  +SHDA++   G + +
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVECGCGTKHV

AT5G13260.1 unknown protein1.8e-0656.76Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE
        F  RA++ G++ D A ERL+FWISRS   P+SHDA+E
Subjt:  FLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVE

AT5G23700.1 unknown protein6.2e-0763.16Show/hide
Query:  FLPRAKAYGVDEDVADERLQFWISRS-GQPPTSHDAVE
        F  RAK + V+ED+ADER QFW SRS G+ PTS DAV+
Subjt:  FLPRAKAYGVDEDVADERLQFWISRS-GQPPTSHDAVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTTCAAGGCTTCCTCAATGGTCGATGTCATGAACAAGTCTTACATCGGTTCTATTGCCCATTGTTGCTTCAATGAACTGACGTTGCAAGAAGATACAGCTTCTAT
CGTTGCAGGCCAAGGAACAACCTTGCAGGGGGCATATACTAATGACAAGTTTCTTTTTAAGTATAACCCTTTGTTTGAACCTGATTCTGACGTTTTTTCTCTCTCCCCGA
GCCTATTCTTTCTTTCCTTCTTCTTAGTTTTCTCCGACATTCATCTCCCTCGAGCACCTCGCCTCGTCTTTTCCGTTCTCTCACTATCACCACTGTCGTTCTTCTCCGTT
CATGTGTGTGTTTTTCTCGTGTGGATCATTTTTCTCCTCGCCGCTGTTCTTGGTTTTCTCTCTGTTGTTGTTCTCGTTGTGCGTTTTCTCCCTCGAGCCAAGGCATATGG
TGTAGATGAGGATGTTGCAGATGAGCGGCTTCAGTTTTGGATCAGTCGTAGTGGACAACCTCCAACTTCACATGATGCTGTGGAGTGTGGATGTGGTACGAAACATGTTT
TCCGTTACTGCTGTTACTGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTTCAAGGCTTCCTCAATGGTCGATGTCATGAACAAGTCTTACATCGGTTCTATTGCCCATTGTTGCTTCAATGAACTGACGTTGCAAGAAGATACAGCTTCTAT
CGTTGCAGGCCAAGGAACAACCTTGCAGGGGGCATATACTAATGACAAGTTTCTTTTTAAGTATAACCCTTTGTTTGAACCTGATTCTGACGTTTTTTCTCTCTCCCCGA
GCCTATTCTTTCTTTCCTTCTTCTTAGTTTTCTCCGACATTCATCTCCCTCGAGCACCTCGCCTCGTCTTTTCCGTTCTCTCACTATCACCACTGTCGTTCTTCTCCGTT
CATGTGTGTGTTTTTCTCGTGTGGATCATTTTTCTCCTCGCCGCTGTTCTTGGTTTTCTCTCTGTTGTTGTTCTCGTTGTGCGTTTTCTCCCTCGAGCCAAGGCATATGG
TGTAGATGAGGATGTTGCAGATGAGCGGCTTCAGTTTTGGATCAGTCGTAGTGGACAACCTCCAACTTCACATGATGCTGTGGAGTGTGGATGTGGTACGAAACATGTTT
TCCGTTACTGCTGTTACTGGCTTTGA
Protein sequenceShow/hide protein sequence
MSFKASSMVDVMNKSYIGSIAHCCFNELTLQEDTASIVAGQGTTLQGAYTNDKFLFKYNPLFEPDSDVFSLSPSLFFLSFFLVFSDIHLPRAPRLVFSVLSLSPLSFFSV
HVCVFLVWIIFLLAAVLGFLSVVVLVVRFLPRAKAYGVDEDVADERLQFWISRSGQPPTSHDAVECGCGTKHVFRYCCYWL