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Lag0027735 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027735
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr8:4263442..4264032
RNA-Seq ExpressionLag0027735
SyntenyLag0027735
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]3.1e-3252.94Show/hide
Query:  MKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLTVKQ
        MK +VP KF++P   +YDG  DP  HLD Y  W D +G  EA RCR F+ TLTG  R WF ++ R+SI SF+ELAR FVTQF G  +R +P   LLT+KQ
Subjt:  MKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLTVKQ

Query:  GPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL
           ESL+DY+ RF+ E LQVE   D V L   ISG+
Subjt:  GPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]3.1e-3251.8Show/hide
Query:  DEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLT
        +EIMK +VP KF++P   Q+DG  D   HLDAY+ WMD +G +EA +CR F+ TL+G AR WF ++ R SI SF+ LA+ FVTQF+G RSR +P   LLT
Subjt:  DEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLT

Query:  VKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL
        +KQ   ESL DY+ RF+ E LQVE   + V+L A +S +
Subjt:  VKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]5.0e-3850.3Show/hide
Query:  EGSYQTSQKKAENEDIEGLIGQEGPVFTDEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSID
        E S +    K +  D+E L+ Q    FT+EIM+ +VP KF++P   Q+D   DP  HLDAY+ WMD +G +EA RCR F+ TL G AR WF ++ R SI 
Subjt:  EGSYQTSQKKAENEDIEGLIGQEGPVFTDEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSID

Query:  SFRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL
        SF+ LAR FVTQF+G R R +P   LLT+KQ   ESLRDY+ RF+ E LQVE   D V+L A +SG+
Subjt:  SFRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]5.5e-3747.9Show/hide
Query:  EGSYQTSQKKAENEDIEGLIGQEGPVFTDEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSID
        E S +   +K +  D+E L+GQ    FT+EIM+ +VP KF++P    +DG  +P  HLDAY+ WMD +G ++A RCR F+ TL G AR WF ++ R SI 
Subjt:  EGSYQTSQKKAENEDIEGLIGQEGPVFTDEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSID

Query:  SFRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL
        SF+ LAR F+TQF+G R R +P   LLT+KQ   ESL DY+ RF+ E LQ+E   D V+L A +SG+
Subjt:  SFRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]1.4e-3243.26Show/hide
Query:  QGRKRSGWLQGEGSYQTSQKKAENEDIEGLIGQEGPVFTDEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQ
        QG +    LQ E   +  Q   E   ++ +  +  P FT +IM  + P +F +P    YDG++DP +HL+ Y+T M+  GA++A  CRAF LTL G AR+
Subjt:  QGRKRSGWLQGEGSYQTSQKKAENEDIEGLIGQEGPVFTDEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQ

Query:  WFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL
        WF ++   SI SF +L+R F + F  AR R KP   LLTVKQ   E+LRDYI R++NE+ QV+ Y DG+AL+ ++ GL
Subjt:  WFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.5e-3252.94Show/hide
Query:  MKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLTVKQ
        MK +VP KF++P   +YDG  DP  HLD Y  W D +G  EA RCR F+ TLTG  R WF ++ R+SI SF+ELAR FVTQF G  +R +P   LLT+KQ
Subjt:  MKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLTVKQ

Query:  GPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL
           ESL+DY+ RF+ E LQVE   D V L   ISG+
Subjt:  GPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL

A0A6J1D7D2 uncharacterized protein LOC1110183071.5e-3251.8Show/hide
Query:  DEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLT
        +EIMK +VP KF++P   Q+DG  D   HLDAY+ WMD +G +EA +CR F+ TL+G AR WF ++ R SI SF+ LA+ FVTQF+G RSR +P   LLT
Subjt:  DEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLT

Query:  VKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL
        +KQ   ESL DY+ RF+ E LQVE   + V+L A +S +
Subjt:  VKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL

A0A6J1DWY0 uncharacterized protein LOC1110252932.4e-3850.3Show/hide
Query:  EGSYQTSQKKAENEDIEGLIGQEGPVFTDEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSID
        E S +    K +  D+E L+ Q    FT+EIM+ +VP KF++P   Q+D   DP  HLDAY+ WMD +G +EA RCR F+ TL G AR WF ++ R SI 
Subjt:  EGSYQTSQKKAENEDIEGLIGQEGPVFTDEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSID

Query:  SFRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL
        SF+ LAR FVTQF+G R R +P   LLT+KQ   ESLRDY+ RF+ E LQVE   D V+L A +SG+
Subjt:  SFRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL

A0A6J1DZ49 uncharacterized protein LOC1110248514.4e-3252.21Show/hide
Query:  MKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLTVKQ
        MK +   KF++P   +YDG  DP  HLDAY+ W D +   EA RCR F+ TLTG AR WF ++ R SI SF+ELA  FVTQF+G R + KP   LLT+KQ
Subjt:  MKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLTVKQ

Query:  GPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL
           ESL++Y+ RF+ E LQVE   D VAL A +SG+
Subjt:  GPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL

A0A6J1E1E7 uncharacterized protein LOC1110255482.7e-3747.9Show/hide
Query:  EGSYQTSQKKAENEDIEGLIGQEGPVFTDEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSID
        E S +   +K +  D+E L+GQ    FT+EIM+ +VP KF++P    +DG  +P  HLDAY+ WMD +G ++A RCR F+ TL G AR WF ++ R SI 
Subjt:  EGSYQTSQKKAENEDIEGLIGQEGPVFTDEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFALTLTGLARQWFGKVPRRSID

Query:  SFRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL
        SF+ LAR F+TQF+G R R +P   LLT+KQ   ESL DY+ RF+ E LQ+E   D V+L A +SG+
Subjt:  SFRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATACAGAAAACAATGGCAAGTTGGAGCCTCGGCCAAAGTCCGAGGCCGAGCAGGGTCGAAAGAGGTCTGGATGGCTGCAGGGGGAGGGTAGTTACCAAACCTCCCA
AAAGAAAGCAGAAAACGAGGATATAGAAGGTTTGATTGGACAGGAAGGGCCAGTCTTCACTGATGAGATAATGAAAAGGGAGGTGCCGCACAAATTCAGGGTGCCGAACT
TCCCACAGTACGATGGGAAAAAGGATCCGAAACAACACCTAGATGCATACCAAACCTGGATGGACTTCCATGGGGCAAACGAGGCAACGAGGTGTCGGGCCTTTGCACTC
ACACTCACAGGCTTAGCGAGGCAGTGGTTTGGGAAGGTCCCGCGAAGGTCAATAGACTCGTTCAGAGAGTTGGCTCGGGTGTTTGTCACGCAGTTCCTAGGAGCCCGTAG
TCGACAGAAGCCCCAGATCAACTTGCTAACAGTAAAGCAGGGGCCCCGGGAAAGCCTAAGGGATTATATTAACAGGTTTAGCAATGAGGTTTTGCAGGTGGAACGTTACC
ATGATGGAGTTGCTTTGACTGCTGTAATTTCAGGTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATACAGAAAACAATGGCAAGTTGGAGCCTCGGCCAAAGTCCGAGGCCGAGCAGGGTCGAAAGAGGTCTGGATGGCTGCAGGGGGAGGGTAGTTACCAAACCTCCCA
AAAGAAAGCAGAAAACGAGGATATAGAAGGTTTGATTGGACAGGAAGGGCCAGTCTTCACTGATGAGATAATGAAAAGGGAGGTGCCGCACAAATTCAGGGTGCCGAACT
TCCCACAGTACGATGGGAAAAAGGATCCGAAACAACACCTAGATGCATACCAAACCTGGATGGACTTCCATGGGGCAAACGAGGCAACGAGGTGTCGGGCCTTTGCACTC
ACACTCACAGGCTTAGCGAGGCAGTGGTTTGGGAAGGTCCCGCGAAGGTCAATAGACTCGTTCAGAGAGTTGGCTCGGGTGTTTGTCACGCAGTTCCTAGGAGCCCGTAG
TCGACAGAAGCCCCAGATCAACTTGCTAACAGTAAAGCAGGGGCCCCGGGAAAGCCTAAGGGATTATATTAACAGGTTTAGCAATGAGGTTTTGCAGGTGGAACGTTACC
ATGATGGAGTTGCTTTGACTGCTGTAATTTCAGGTTTGTAG
Protein sequenceShow/hide protein sequence
MYTENNGKLEPRPKSEAEQGRKRSGWLQGEGSYQTSQKKAENEDIEGLIGQEGPVFTDEIMKREVPHKFRVPNFPQYDGKKDPKQHLDAYQTWMDFHGANEATRCRAFAL
TLTGLARQWFGKVPRRSIDSFRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVERYHDGVALTAVISGL