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Lag0027748 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027748
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-binding protein 39-like
Genome locationchr8:4415381..4416455
RNA-Seq ExpressionLag0027748
SyntenyLag0027748
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031515.1 phosphatidylserine decarboxylase proenzyme 2-like [Cucumis melo var. makuwa]1.6e-0477.14Show/hide
Query:  DSDSNTEELELLDPSPANAVVGKIFVSCFVESPYD
        DSDS+ EELELLDPSP NAVVGKI VSC VE P +
Subjt:  DSDSNTEELELLDPSPANAVVGKIFVSCFVESPYD

XP_022133415.1 RNA-binding protein 39 isoform X1 [Momordica charantia]1.6e-0438.05Show/hide
Query:  MKEKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVP
        MKEKKDMVEPEADPERDQRTVFA+Q      E   Y   F        ++ L+    +    G  +V  +                         +  VP
Subjt:  MKEKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVP

Query:  MAIAISGQLLLGE
        MAIA+SGQLLLG+
Subjt:  MAIAISGQLLLGE

XP_022133416.1 RNA-binding protein 39 isoform X2 [Momordica charantia]1.6e-0438.05Show/hide
Query:  MKEKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVP
        MKEKKDMVEPEADPERDQRTVFA+Q      E   Y   F        ++ L+    +    G  +V  +                         +  VP
Subjt:  MKEKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVP

Query:  MAIAISGQLLLGE
        MAIA+SGQLLLG+
Subjt:  MAIAISGQLLLGE

XP_038881755.1 RNA-binding protein 39 isoform X1 [Benincasa hispida]1.6e-0438.05Show/hide
Query:  MKEKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVP
        MKEKKDMVEPEADPERDQRTVFA+Q      E   Y   F        ++ L+    +    G  +V  +                         +  VP
Subjt:  MKEKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVP

Query:  MAIAISGQLLLGE
        MAIA+SGQLLLG+
Subjt:  MAIAISGQLLLGE

XP_038888956.1 phosphatidylserine decarboxylase proenzyme 2-like [Benincasa hispida]7.4e-0577.14Show/hide
Query:  DSDSNTEELELLDPSPANAVVGKIFVSCFVESPYD
        DSDS+TEELELLDPSP NAVVGKI +SC VE P +
Subjt:  DSDSNTEELELLDPSPANAVVGKIFVSCFVESPYD

TrEMBL top hitse value%identityAlignment
A0A5A7SQW5 Phosphatidylserine decarboxylase proenzyme 2-like8.0e-0577.14Show/hide
Query:  DSDSNTEELELLDPSPANAVVGKIFVSCFVESPYD
        DSDS+ EELELLDPSP NAVVGKI VSC VE P +
Subjt:  DSDSNTEELELLDPSPANAVVGKIFVSCFVESPYD

A0A5D3C736 Phosphatidylserine decarboxylase8.0e-0577.14Show/hide
Query:  DSDSNTEELELLDPSPANAVVGKIFVSCFVESPYD
        DSDS+ EELELLDPSP NAVVGKI VSC VE P +
Subjt:  DSDSNTEELELLDPSPANAVVGKIFVSCFVESPYD

A0A6J1BV17 RNA-binding protein 39 isoform X28.0e-0538.05Show/hide
Query:  MKEKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVP
        MKEKKDMVEPEADPERDQRTVFA+Q      E   Y   F        ++ L+    +    G  +V  +                         +  VP
Subjt:  MKEKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVP

Query:  MAIAISGQLLLGE
        MAIA+SGQLLLG+
Subjt:  MAIAISGQLLLGE

A0A6J1BV68 RNA-binding protein 39 isoform X18.0e-0538.05Show/hide
Query:  MKEKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVP
        MKEKKDMVEPEADPERDQRTVFA+Q      E   Y   F        ++ L+    +    G  +V  +                         +  VP
Subjt:  MKEKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVP

Query:  MAIAISGQLLLGE
        MAIA+SGQLLLG+
Subjt:  MAIAISGQLLLGE

A0A6J1BWL9 RNA-binding protein 39 isoform X38.0e-0538.05Show/hide
Query:  MKEKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVP
        MKEKKDMVEPEADPERDQRTVFA+Q      E   Y   F        ++ L+    +    G  +V  +                         +  VP
Subjt:  MKEKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVP

Query:  MAIAISGQLLLGE
        MAIA+SGQLLLG+
Subjt:  MAIAISGQLLLGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16940.1 Splicing factor, CC1-like2.3e-0432.43Show/hide
Query:  EKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVPMA
        +K+D VEPEADPERDQRTVFA+Q      E   Y   F        ++ ++    +    G  +V  +                         +  VPMA
Subjt:  EKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVPMA

Query:  IAISGQLLLGE
        IA+SGQ LLG+
Subjt:  IAISGQLLLGE

AT2G16940.2 Splicing factor, CC1-like2.3e-0432.43Show/hide
Query:  EKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVPMA
        +K+D VEPEADPERDQRTVFA+Q      E   Y   F        ++ ++    +    G  +V  +                         +  VPMA
Subjt:  EKKDMVEPEADPERDQRTVFAHQF----DEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVPMA

Query:  IAISGQLLLGE
        IA+SGQ LLG+
Subjt:  IAISGQLLLGE

AT2G16940.3 Splicing factor, CC1-like3.9e-0482.61Show/hide
Query:  EKKDMVEPEADPERDQRTVFAHQ
        +K+D VEPEADPERDQRTVFA+Q
Subjt:  EKKDMVEPEADPERDQRTVFAHQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAAAGAAAGACATGGTGGAGCCAGAAGCTGATCCGGAGAGGGATCAAAGAACTGTATTTGCTCATCAGTTTGATGAATTCCTTTGTTATTTCCTTACCTTTCA
TGATTCAGACTCTAACACTGAGGAACTTGAATTGTTGGATCCATCACCAGCTAATGCAGTGGTCGGCAAAATTTTTGTGTCATGTTTTGTCGAGTCACCATACGATCCCC
CTCCCTCCTCTAGTCTAAGCTGGTCATCTGCTTTTTGGTTTTGTGTTGCCTCTTCATTTGATGTACCTATGGCTATTGCTATCTCTGGTCAACTACTTCTTGGTGAAGGA
ACCACGATTGGTGAAGGAAGACTCGTAAAGGTCGTTCTCGACTGCCCTAATCCTTTATTCTGCAATTTTAGATGTTCTTCACAAATATGGGATGTTCACATGTATTTCTT
TGCTATTATTTTGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAAAGAAAGACATGGTGGAGCCAGAAGCTGATCCGGAGAGGGATCAAAGAACTGTATTTGCTCATCAGTTTGATGAATTCCTTTGTTATTTCCTTACCTTTCA
TGATTCAGACTCTAACACTGAGGAACTTGAATTGTTGGATCCATCACCAGCTAATGCAGTGGTCGGCAAAATTTTTGTGTCATGTTTTGTCGAGTCACCATACGATCCCC
CTCCCTCCTCTAGTCTAAGCTGGTCATCTGCTTTTTGGTTTTGTGTTGCCTCTTCATTTGATGTACCTATGGCTATTGCTATCTCTGGTCAACTACTTCTTGGTGAAGGA
ACCACGATTGGTGAAGGAAGACTCGTAAAGGTCGTTCTCGACTGCCCTAATCCTTTATTCTGCAATTTTAGATGTTCTTCACAAATATGGGATGTTCACATGTATTTCTT
TGCTATTATTTTGAGATAA
Protein sequenceShow/hide protein sequence
MKEKKDMVEPEADPERDQRTVFAHQFDEFLCYFLTFHDSDSNTEELELLDPSPANAVVGKIFVSCFVESPYDPPPSSSLSWSSAFWFCVASSFDVPMAIAISGQLLLGEG
TTIGEGRLVKVVLDCPNPLFCNFRCSSQIWDVHMYFFAIILR