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Lag0027755 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027755
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr8:4480079..4480420
RNA-Seq ExpressionLag0027755
SyntenyLag0027755
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5450904.1 hypothetical protein F2P56_031219, partial [Juglans regia]2.0e-0734.58Show/hide
Query:  LVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQ---QSHDPRRCSFGFTRSGNEAAHQLAQLALRRGSDFTWLEEWPDEL
        L E + +   V L QELGF     E D++ ++  +N +  D+S  G  + + +   ++H   + SF   R GN+AAH LA+L L   S+  W+EE PD +
Subjt:  LVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQ---QSHDPRRCSFGFTRSGNEAAHQLAQLALRRGSDFTWLEEWPDEL

Query:  VDIIFLN
        + II L+
Subjt:  VDIIFLN

XP_018821943.1 uncharacterized protein LOC108991969 [Juglans regia]2.0e-0734.58Show/hide
Query:  LVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQ---QSHDPRRCSFGFTRSGNEAAHQLAQLALRRGSDFTWLEEWPDEL
        L E + +   V L QELGF     E D++ ++  +N +  D+S  G  + + +   ++H   + SF   R GN+AAH LA+L L   S+  W+EE PD +
Subjt:  LVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQ---QSHDPRRCSFGFTRSGNEAAHQLAQLALRRGSDFTWLEEWPDEL

Query:  VDIIFLN
        + II L+
Subjt:  VDIIFLN

XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]7.7e-0733.96Show/hide
Query:  IDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQQSHDPRRCSFGFT---RSGNEAAHQLAQLALRRGSDFTWLEEWPD
        + L E     EGV LA E G  PF +E DS ++  LL    +D S++G   S  +          GF+   R GN  AH LA++ +   S   W+EEW  
Subjt:  IDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQQSHDPRRCSFGFT---RSGNEAAHQLAQLALRRGSDFTWLEEWPD

Query:  ELVDII
        +L ++I
Subjt:  ELVDII

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]2.2e-0939.42Show/hide
Query:  LHSIDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQQS-HDPRRCSFGFT-RSGNEAAHQLAQLALRRGSDFTWLEEW
        + S+D+ EA V VEG+ LA ++G +P ++E DS RI  L +   +DLS+ G  + + +         SF F  R GN+AAH LA+ AL       W+E+W
Subjt:  LHSIDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQQS-HDPRRCSFGFT-RSGNEAAHQLAQLALRRGSDFTWLEEW

Query:  PDEL
        P EL
Subjt:  PDEL

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]7.9e-1246.73Show/hide
Query:  IDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVG---SFLSEFQQSHDPRRCSFGFT-RSGNEAAHQLAQLALRRGSDFTWLEEWP
        +D VE   + EG+LLA E GF  F +E DS RI  LL     D S+VG   S +  F  SH   R SF FT R+GN  AH LAQLAL       W+EEWP
Subjt:  IDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVG---SFLSEFQQSHDPRRCSFGFT-RSGNEAAHQLAQLALRRGSDFTWLEEWP

Query:  DELVDII
        DE+  ++
Subjt:  DELVDII

TrEMBL top hitse value%identityAlignment
A0A2I4ERC4 uncharacterized protein LOC1089919699.8e-0834.58Show/hide
Query:  LVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQ---QSHDPRRCSFGFTRSGNEAAHQLAQLALRRGSDFTWLEEWPDEL
        L E + +   V L QELGF     E D++ ++  +N +  D+S  G  + + +   ++H   + SF   R GN+AAH LA+L L   S+  W+EE PD +
Subjt:  LVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQ---QSHDPRRCSFGFTRSGNEAAHQLAQLALRRGSDFTWLEEWPDEL

Query:  VDIIFLN
        + II L+
Subjt:  VDIIFLN

A0A6J1C467 uncharacterized protein LOC1110077753.7e-0733.96Show/hide
Query:  IDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQQSHDPRRCSFGFT---RSGNEAAHQLAQLALRRGSDFTWLEEWPD
        + L E     EGV LA E G  PF +E DS ++  LL    +D S++G   S  +          GF+   R GN  AH LA++ +   S   W+EEW  
Subjt:  IDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQQSHDPRRCSFGFT---RSGNEAAHQLAQLALRRGSDFTWLEEWPD

Query:  ELVDII
        +L ++I
Subjt:  ELVDII

A0A6J1CIF1 uncharacterized protein LOC1110112371.0e-0939.42Show/hide
Query:  LHSIDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQQS-HDPRRCSFGFT-RSGNEAAHQLAQLALRRGSDFTWLEEW
        + S+D+ EA V VEG+ LA ++G +P ++E DS RI  L +   +DLS+ G  + + +         SF F  R GN+AAH LA+ AL       W+E+W
Subjt:  LHSIDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQQS-HDPRRCSFGFT-RSGNEAAHQLAQLALRRGSDFTWLEEW

Query:  PDEL
        P EL
Subjt:  PDEL

A0A6J1DBJ7 uncharacterized protein LOC1110189733.8e-1246.73Show/hide
Query:  IDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVG---SFLSEFQQSHDPRRCSFGFT-RSGNEAAHQLAQLALRRGSDFTWLEEWP
        +D VE   + EG+LLA E GF  F +E DS RI  LL     D S+VG   S +  F  SH   R SF FT R+GN  AH LAQLAL       W+EEWP
Subjt:  IDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVG---SFLSEFQQSHDPRRCSFGFT-RSGNEAAHQLAQLALRRGSDFTWLEEWP

Query:  DELVDII
        DE+  ++
Subjt:  DELVDII

V4UMR3 RNase H domain-containing protein (Fragment)8.3e-0735.29Show/hide
Query:  IDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQQSHDPRRCSFGF---TRSGNEAAHQLAQLALRRGSDFTWLEEWPD
        I+ VEA  +  G+ L  ++G  P ++E DS  ++ L+N  I    +VG  +S+ Q+       SF      RS NE AH L++LAL    +  WLEE P 
Subjt:  IDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQQSHDPRRCSFGF---TRSGNEAAHQLAQLALRRGSDFTWLEEWPD

Query:  EL
        E+
Subjt:  EL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTTTTGCATAGTATTGATTTGGTTGAAGCTCACGTTATTGTCGAAGGAGTTCTCCTGGCGCAAGAACTGGGTTTCCATCCATTTTTGGTAGAACCGGACTCTCA
ACGGATCATTTGTCTTCTCAATCTCTCGATTGACGATTTGTCTAAAGTGGGAAGTTTTCTCTCTGAATTTCAACAGTCGCATGACCCTCGAAGATGCTCGTTTGGTTTCA
CTCGATCTGGTAATGAGGCGGCTCACCAACTAGCCCAACTGGCTCTTCGACGGGGATCAGATTTCACTTGGTTGGAAGAATGGCCTGATGAGTTAGTTGATATTATTTTT
CTAAATGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTTTTGCATAGTATTGATTTGGTTGAAGCTCACGTTATTGTCGAAGGAGTTCTCCTGGCGCAAGAACTGGGTTTCCATCCATTTTTGGTAGAACCGGACTCTCA
ACGGATCATTTGTCTTCTCAATCTCTCGATTGACGATTTGTCTAAAGTGGGAAGTTTTCTCTCTGAATTTCAACAGTCGCATGACCCTCGAAGATGCTCGTTTGGTTTCA
CTCGATCTGGTAATGAGGCGGCTCACCAACTAGCCCAACTGGCTCTTCGACGGGGATCAGATTTCACTTGGTTGGAAGAATGGCCTGATGAGTTAGTTGATATTATTTTT
CTAAATGTTTAG
Protein sequenceShow/hide protein sequence
MGLLHSIDLVEAHVIVEGVLLAQELGFHPFLVEPDSQRIICLLNLSIDDLSKVGSFLSEFQQSHDPRRCSFGFTRSGNEAAHQLAQLALRRGSDFTWLEEWPDELVDIIF
LNV