; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0027756 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027756
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr8:4486641..4486979
RNA-Seq ExpressionLag0027756
SyntenyLag0027756
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]1.4e-0840.43Show/hide
Query:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS
        ++P   +TQ +  WW  K+G Y E+    LV+S IP P +P+ PK  G N GGK I + E   P        + S SS SDHHWKR  K  + S
Subjt:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS

KAA0048379.1 hypothetical protein E6C27_scaffold264G00980 [Cucumis melo var. makuwa]9.0e-0839.58Show/hide
Query:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFEP-----GEFHSTDNNGSQSSSSDHHWKRSKKSNQPS
        ++P+  +TQ +  WW  K+G Y E+    LV+SAIP P +P+ PK  G N GGK I + E       E      + S SS SD HWKR  K  + S
Subjt:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFEP-----GEFHSTDNNGSQSSSSDHHWKRSKKSNQPS

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]1.5e-0739.36Show/hide
Query:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS
        ++P   +TQ +  WW  K+ NY E+    LV+SAIP P +P+ PK  G N GGK I + E   P      + + S S+ SD HWKR  K  + S
Subjt:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]4.0e-0839.36Show/hide
Query:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS
        ++P   +TQ +  WW  K+G Y E+    LV+SAIP P +P+ PK  G N GGK I + E   P      + + S S+ SD HWKR  K  + S
Subjt:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]1.4e-0840.43Show/hide
Query:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS
        ++P   +TQ +  WW  K+G Y E+    LV+S IP P +P+ PK  G N GGK I + E   P        + S SS SDHHWKR  K  + S
Subjt:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein6.7e-0940.43Show/hide
Query:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS
        ++P   +TQ +  WW  K+G Y E+    LV+S IP P +P+ PK  G N GGK I + E   P        + S SS SDHHWKR  K  + S
Subjt:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS

A0A5A7U4K9 Uncharacterized protein4.3e-0839.58Show/hide
Query:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFEP-----GEFHSTDNNGSQSSSSDHHWKRSKKSNQPS
        ++P+  +TQ +  WW  K+G Y E+    LV+SAIP P +P+ PK  G N GGK I + E       E      + S SS SD HWKR  K  + S
Subjt:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFEP-----GEFHSTDNNGSQSSSSDHHWKRSKKSNQPS

A0A5A7UGW6 PMD domain-containing protein7.4e-0839.36Show/hide
Query:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS
        ++P   +TQ +  WW  K+ NY E+    LV+SAIP P +P+ PK  G N GGK I + E   P      + + S S+ SD HWKR  K  + S
Subjt:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS

A0A5A7UVI5 PMD domain-containing protein1.9e-0839.36Show/hide
Query:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS
        ++P   +TQ +  WW  K+G Y E+    LV+SAIP P +P+ PK  G N GGK I + E   P      + + S S+ SD HWKR  K  + S
Subjt:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS

A0A5D3D7V4 PMD domain-containing protein6.7e-0940.43Show/hide
Query:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS
        ++P   +TQ +  WW  K+G Y E+    LV+S IP P +P+ PK  G N GGK I + E   P        + S SS SDHHWKR  K  + S
Subjt:  MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDN-GGKRIHMFE---PGEFHSTDNNGSQSSSSDHHWKRSKKSNQPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCACATATCCAAATTACCCAGTGCTACCGGTGTTGGTGGTTGGCAAAAAATGGAAATTATCTTGAAGAAGGCATAGAAAAGTTGGTGGCTAGTGCCATTCCTCT
TCCTCCCAAGCCGAAATTTCCCAAAAAGGTTGGTGACAACGGAGGCAAAAGAATTCACATGTTTGAGCCTGGTGAATTTCATTCTACTGATAACAATGGTAGTCAGAGCA
GTAGCAGCGATCATCATTGGAAAAGGTCTAAAAAGTCTAATCAACCATCAGTATGCGAAATGAATTTTTTGATGGAGTTCTTAGCGCATCACAATTTCCTGAACTCCCTG
CACCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCACATATCCAAATTACCCAGTGCTACCGGTGTTGGTGGTTGGCAAAAAATGGAAATTATCTTGAAGAAGGCATAGAAAAGTTGGTGGCTAGTGCCATTCCTCT
TCCTCCCAAGCCGAAATTTCCCAAAAAGGTTGGTGACAACGGAGGCAAAAGAATTCACATGTTTGAGCCTGGTGAATTTCATTCTACTGATAACAATGGTAGTCAGAGCA
GTAGCAGCGATCATCATTGGAAAAGGTCTAAAAAGTCTAATCAACCATCAGTATGCGAAATGAATTTTTTGATGGAGTTCTTAGCGCATCACAATTTCCTGAACTCCCTG
CACCACTGA
Protein sequenceShow/hide protein sequence
MKPHIQITQCYRCWWLAKNGNYLEEGIEKLVASAIPLPPKPKFPKKVGDNGGKRIHMFEPGEFHSTDNNGSQSSSSDHHWKRSKKSNQPSVCEMNFLMEFLAHHNFLNSL
HH