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Lag0027762 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027762
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr8:4687503..4688115
RNA-Seq ExpressionLag0027762
SyntenyLag0027762
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008365213.2 uncharacterized protein LOC103428861 [Malus domestica]9.8e-1636.29Show/hide
Query:  GTGLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPN
        G GLC+ W++AT   ++    F++E++        N   F IYAST+D +R +  Q +S+R+   R+  ++ GDFNDI  N+  EGG  R   SL+   +
Subjt:  GTGLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPN

Query:  FMLSNNLSYMGFSGYPFAWTNRRK
        F+  + L  +G+ GYPF W N+R+
Subjt:  FMLSNNLSYMGFSGYPFAWTNRRK

XP_027124324.1 uncharacterized protein LOC113741027 [Coffea arabica]1.8e-1430.97Show/hide
Query:  DNSVFEGT------------GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSND
        DNS++ G             G CL W E+          F IE +   R       F G+YAS +D  R++  + L +R  +  E +V+ GDFNDI SN+
Subjt:  DNSVFEGT------------GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSND

Query:  AKEGGLERSQHSLQLLPNFMLSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCL
         K GG++R + S     +F+  N L  +G+ G+P+ W+N       V+   + CL
Subjt:  AKEGGLERSQHSLQLLPNFMLSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCL

XP_027169565.1 uncharacterized protein LOC113769302 [Coffea eugenioides]1.8e-1430.97Show/hide
Query:  DNSVFEGT------------GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSND
        DNS++ G             G CL W E+          F IE +   R       F G+YAS +D  R++  + L +R  +  E +V+ GDFNDI SN+
Subjt:  DNSVFEGT------------GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSND

Query:  AKEGGLERSQHSLQLLPNFMLSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCL
         K GG++R + S     +F+  N L  +G+ G+P+ W+N       V+   + CL
Subjt:  AKEGGLERSQHSLQLLPNFMLSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCL

XP_028948114.1 uncharacterized protein LOC114820933 [Malus domestica]2.8e-1541.46Show/hide
Query:  GTGLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPN
        G GLC+LWK+ +   +V    FMIEV+        +   F IYAST++  R +  + LS+R+     + ++ GDFNDI  ND KEGG  RS  SL+   +
Subjt:  GTGLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPN

Query:  FMLSNNLSYMGFSGYPFAWTNRR
        F+  N L  +GF GYPF W N R
Subjt:  FMLSNNLSYMGFSGYPFAWTNRR

XP_028960018.1 uncharacterized protein LOC114825459 [Malus domestica]3.1e-1438.21Show/hide
Query:  GTGLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPN
        G GLCL W++A+   +V +  FMIEV+        +   FGIYAST++  R    + L  R+    +  ++ GDFNDI  N  KEGG  +S  S++    
Subjt:  GTGLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPN

Query:  FMLSNNLSYMGFSGYPFAWTNRR
        F+ +N L  +G+ GYPF W N+R
Subjt:  FMLSNNLSYMGFSGYPFAWTNRR

TrEMBL top hitse value%identityAlignment
A0A068VB86 Methyltransf_2 domain-containing protein7.1e-1234.17Show/hide
Query:  GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPNFM
        G+ LLW E T  + + Y  F IEV              GIYAS ++  R+   + +S+R ++  +N ++ GDFND+ SN+ K GG  R + S      F+
Subjt:  GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPNFM

Query:  LSNNLSYMGFSGYPFAWTNR
          N L  +GF G P+ W+N+
Subjt:  LSNNLSYMGFSGYPFAWTNR

A0A6P6TDK2 uncharacterized protein LOC1136998543.8e-1335Show/hide
Query:  GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPNFM
        GL LLWKE      V    F IE   V     ++  F GIYAS ++  R++  + + +R ++  E +++ GDFNDI SN+ K GG+ R + S Q    F+
Subjt:  GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPNFM

Query:  LSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCLKHGLC
          N L  +GF+G+P+ W N  +    +K      L  GLC
Subjt:  LSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCLKHGLC

A0A6P6U9P4 uncharacterized protein LOC1137084084.2e-1233.57Show/hide
Query:  GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPNFM
        G+ LLWKE    + V    F IE +        +  F G+YA++ D  R++  + L  R  +  + +++ GDFNDI SND K GG  R + S +   +F+
Subjt:  GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPNFM

Query:  LSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCLKHGLC
          N L  +GF G+P+ W N  +    VK      L  GLC
Subjt:  LSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCLKHGLC

A0A6P6UE98 uncharacterized protein LOC1137098532.9e-1332.59Show/hide
Query:  GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPNFM
        G+ LLWKE T    V+   F IE +           F G+YAS +   R+   + L +R  +    + + GDFNDI SN+ K GG+ R + S +   +F+
Subjt:  GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQHSLQLLPNFM

Query:  LSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCL
          N+L  +GF G+P+ W+N       V+   + CL
Subjt:  LSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCL

A0A6P6XAL3 uncharacterized protein LOC1137410278.9e-1530.97Show/hide
Query:  DNSVFEGT------------GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSND
        DNS++ G             G CL W E+          F IE +   R       F G+YAS +D  R++  + L +R  +  E +V+ GDFNDI SN+
Subjt:  DNSVFEGT------------GLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSND

Query:  AKEGGLERSQHSLQLLPNFMLSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCL
         K GG++R + S     +F+  N L  +G+ G+P+ W+N       V+   + CL
Subjt:  AKEGGLERSQHSLQLLPNFMLSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAACTACTAAGGTGTGGGGAACCCTCTGACAATTCAGTTTTTGAAGGAACAGGGTTGTGTCTATTGTGGAAAGAGGCGACAGGGGCAGAGGTGGTGCATTACAG
GGTTTTTATGATTGAGGTGCGCTTTGTACCAAGAGCGGGTTATGCAAATGACACTTTTTTTGGGATTTATGCAAGTACGAATGATGTTGAAAGAGAGAAACATTTGCAAT
TCTTGAGCCAGAGACTGGCGATGGTTAGAGAAAATTATGTGGTGCGGGGTGATTTTAATGATATTGGTAGCAATGATGCGAAGGAAGGTGGGCTTGAGCGTTCCCAACAT
AGTTTGCAGCTTCTTCCGAATTTTATGCTGTCAAATAACCTATCTTATATGGGCTTTTCTGGTTATCCTTTTGCCTGGACCAATCGGCGGAAGAGATGTGCTCTGGTTAA
GTTGGGGCGCGAGAATTGCCTGAAGCATGGGTTGTGCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAACTACTAAGGTGTGGGGAACCCTCTGACAATTCAGTTTTTGAAGGAACAGGGTTGTGTCTATTGTGGAAAGAGGCGACAGGGGCAGAGGTGGTGCATTACAG
GGTTTTTATGATTGAGGTGCGCTTTGTACCAAGAGCGGGTTATGCAAATGACACTTTTTTTGGGATTTATGCAAGTACGAATGATGTTGAAAGAGAGAAACATTTGCAAT
TCTTGAGCCAGAGACTGGCGATGGTTAGAGAAAATTATGTGGTGCGGGGTGATTTTAATGATATTGGTAGCAATGATGCGAAGGAAGGTGGGCTTGAGCGTTCCCAACAT
AGTTTGCAGCTTCTTCCGAATTTTATGCTGTCAAATAACCTATCTTATATGGGCTTTTCTGGTTATCCTTTTGCCTGGACCAATCGGCGGAAGAGATGTGCTCTGGTTAA
GTTGGGGCGCGAGAATTGCCTGAAGCATGGGTTGTGCATTTGA
Protein sequenceShow/hide protein sequence
MLELLRCGEPSDNSVFEGTGLCLLWKEATGAEVVHYRVFMIEVRFVPRAGYANDTFFGIYASTNDVEREKHLQFLSQRLAMVRENYVVRGDFNDIGSNDAKEGGLERSQH
SLQLLPNFMLSNNLSYMGFSGYPFAWTNRRKRCALVKLGRENCLKHGLCI