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Lag0027763 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027763
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr8:4689698..4690195
RNA-Seq ExpressionLag0027763
SyntenyLag0027763
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0707526.1 hypothetical protein [Gossypium laxum]3.2e-0443.94Show/hide
Query:  KEELHITEPLVRGLIIINENVKNWVWI--KYERLPRFCSSYGVMGHTLPWCNAHSQQRGSSQESLM
        K  L++ +PL RG+ + ++N   W WI  KYE+LP FC   G MGH LP CN  S    S  E+ M
Subjt:  KEELHITEPLVRGLIIINENVKNWVWI--KYERLPRFCSSYGVMGHTLPWCNAHSQQRGSSQESLM

XP_042942840.1 uncharacterized protein LOC122277023 [Carya illinoinensis]5.4e-0441.67Show/hide
Query:  ELHITEPLVRGLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWC----NAHSQQRGS
        E+ IT+PL+RG+ I  E  + W+ ++YERLP FC + G + HT   C    N   QQ G+
Subjt:  ELHITEPLVRGLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWC----NAHSQQRGS

XP_042942875.1 uncharacterized protein LOC122277059 [Carya illinoinensis]5.4e-0441.67Show/hide
Query:  ELHITEPLVRGLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWC----NAHSQQRGS
        E+ IT+PL+RG+ I  E  + W+ ++YERLP FC + G + HT   C    N   QQ G+
Subjt:  ELHITEPLVRGLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWC----NAHSQQRGS

XP_042952219.1 uncharacterized protein LOC122289299 [Carya illinoinensis]5.4e-0437.5Show/hide
Query:  ELHITEPLVRGLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWCNAHSQQRGSSQESLMFGQMAESRAV
        E+ I++ L RG+ +  E  K WV+ KYERLP FC   GV+ H    CN    +  +S++ L +G    + AV
Subjt:  ELHITEPLVRGLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWCNAHSQQRGSSQESLMFGQMAESRAV

XP_042955682.1 uncharacterized protein LOC122291574 [Carya illinoinensis]5.4e-0441.67Show/hide
Query:  ELHITEPLVRGLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWC----NAHSQQRGS
        E+ IT+PL+RG+ I  E  + W+ ++YERLP FC + G + HT   C    N   QQ G+
Subjt:  ELHITEPLVRGLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWC----NAHSQQRGS

TrEMBL top hitse value%identityAlignment
A0A1U8PYB4 uncharacterized protein LOC1079632147.6e-0444.23Show/hide
Query:  KEELHITEPLVRGLII-INENVKNWVWIKYERLPRFCSSYGVMGHTLPWCNA
        K  L + +PL RG+ + +N   K W+  KYE+LP FC   G +GH LP CN+
Subjt:  KEELHITEPLVRGLII-INENVKNWVWIKYERLPRFCSSYGVMGHTLPWCNA

A0A6P9E8X6 uncharacterized protein LOC1183480315.9e-0439.06Show/hide
Query:  KEELHITEPLVRGLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWCNAHSQQRGSSQESLM
        K E+ + +PL+RG I+     KN++  KYERLPRFC   GV+ H +  C     Q+  ++E +M
Subjt:  KEELHITEPLVRGLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWCNAHSQQRGSSQESLM

A0A7J8Z6M7 CCHC-type domain-containing protein (Fragment)1.5e-0443.94Show/hide
Query:  KEELHITEPLVRGLIIINENVKNWVWI--KYERLPRFCSSYGVMGHTLPWCNAHSQQRGSSQESLM
        K  L++ +PL RG+ + ++N   W WI  KYE+LP FC   G MGH LP CN  S    S  E+ M
Subjt:  KEELHITEPLVRGLIIINENVKNWVWI--KYERLPRFCSSYGVMGHTLPWCNAHSQQRGSSQESLM

A0A7N2LNW8 zf-CCHC_4 domain-containing protein4.5e-0450Show/hide
Query:  LHITEPLVR-GLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWCNAH
        L I++PL R G I  ++ V+ WV  KYERLP FC  YG++GH L  C +H
Subjt:  LHITEPLVR-GLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWCNAH

A0A7N2QXR1 CCHC-type domain-containing protein6.9e-0543.94Show/hide
Query:  ELHITEPLVRGLII-INENVKNWVWIKYERLPRFCSSYGVMGH-TLPWCNAHSQQRGSSQESLMFG
        ++ I++PL+RG II I E  K WV+ KYERLP FC   G++GH  L  C  H       ++ L FG
Subjt:  ELHITEPLVRGLII-INENVKNWVWIKYERLPRFCSSYGVMGH-TLPWCNAHSQQRGSSQESLMFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCTGATTGAGGATATTTTGGGTAGGTTCAAGATAAGGGAGAATGAGTGGGAGGCAGTAGAGAAGGAGGAGCTTCATATTACGGAGCCTCTTGTTCGTGGGTT
AATAATTATTAATGAGAATGTTAAAAATTGGGTATGGATCAAATACGAGCGACTCCCCCGGTTCTGCTCTAGCTATGGGGTGATGGGGCATACCTTGCCTTGGTGCAATG
CGCACTCGCAGCAAAGAGGTTCGAGCCAAGAGTCATTGATGTTCGGCCAAATGGCTGAGAGCAGGGCCGTCGCTAATGAAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCTGATTGAGGATATTTTGGGTAGGTTCAAGATAAGGGAGAATGAGTGGGAGGCAGTAGAGAAGGAGGAGCTTCATATTACGGAGCCTCTTGTTCGTGGGTT
AATAATTATTAATGAGAATGTTAAAAATTGGGTATGGATCAAATACGAGCGACTCCCCCGGTTCTGCTCTAGCTATGGGGTGATGGGGCATACCTTGCCTTGGTGCAATG
CGCACTCGCAGCAAAGAGGTTCGAGCCAAGAGTCATTGATGTTCGGCCAAATGGCTGAGAGCAGGGCCGTCGCTAATGAAGCATAA
Protein sequenceShow/hide protein sequence
MDELIEDILGRFKIRENEWEAVEKEELHITEPLVRGLIIINENVKNWVWIKYERLPRFCSSYGVMGHTLPWCNAHSQQRGSSQESLMFGQMAESRAVANEA