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Lag0027779 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0027779
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRab-GAP TBC domain-containing protein
Genome locationchr8:4922147..4922461
RNA-Seq ExpressionLag0027779
SyntenyLag0027779
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0090630 - activation of GTPase activity (biological process)
GO:0005096 - GTPase activator activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053282.1 TBC1 domain family member 2A [Cucumis melo var. makuwa]4.4e-4184.62Show/hide
Query:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF
        M+GTQSKRDI LELQAQIPILRPSIH RRANITVKFQDLYGFTVEGNVDDVN+LNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIA K     S+ 
Subjt:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF

Query:  PSSL
         +++
Subjt:  PSSL
XP_004138606.1 growth hormone-regulated TBC protein 1 [Cucumis sativus]7.5e-4184.62Show/hide
Query:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF
        M+GTQSKRDI LELQAQIPILRPSIH RRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYL+PSVSEGIA K     S+ 
Subjt:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF

Query:  PSSL
         +++
Subjt:  PSSL
XP_016901858.1 PREDICTED: small G protein signaling modulator 3 [Cucumis melo]4.4e-4184.62Show/hide
Query:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF
        M+GTQSKRDI LELQAQIPILRPSIH RRANITVKFQDLYGFTVEGNVDDVN+LNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIA K     S+ 
Subjt:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF

Query:  PSSL
         +++
Subjt:  PSSL
XP_022140274.1 growth hormone-regulated TBC protein 1 [Momordica charantia]3.3e-4185.58Show/hide
Query:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF
        MYGTQSKRDI LELQAQIPILRPSIH RRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVR+QGRVWWALEASKGANWYLEPSVSEGIA K     S+ 
Subjt:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF

Query:  PSSL
         +++
Subjt:  PSSL
XP_038900967.1 growth hormone-regulated TBC protein 1 [Benincasa hispida]1.2e-4186.54Show/hide
Query:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF
        MYGTQSKRDI LELQAQIPILRPSIH RRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIA K     S+ 
Subjt:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF

Query:  PSSL
         +++
Subjt:  PSSL
TrEMBL top hitse value%identityAlignment
A0A0A0LQ82 Rab-GAP TBC domain-containing protein3.6e-4184.62Show/hide
Query:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF
        M+GTQSKRDI LELQAQIPILRPSIH RRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYL+PSVSEGIA K     S+ 
Subjt:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF

Query:  PSSL
         +++
Subjt:  PSSL
A0A0H4TH70 TBC1 domain family member 2A1.6e-4185.58Show/hide
Query:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF
        MYGTQSKRDI LELQAQIPILRPSIH RRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVR+QGRVWWALEASKGANWYLEPSVSEGIA K     S+ 
Subjt:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF

Query:  PSSL
         +++
Subjt:  PSSL
A0A1S4E0V7 small G protein signaling modulator 32.1e-4184.62Show/hide
Query:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF
        M+GTQSKRDI LELQAQIPILRPSIH RRANITVKFQDLYGFTVEGNVDDVN+LNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIA K     S+ 
Subjt:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF

Query:  PSSL
         +++
Subjt:  PSSL
A0A5A7UC13 TBC1 domain family member 2A2.1e-4184.62Show/hide
Query:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF
        M+GTQSKRDI LELQAQIPILRPSIH RRANITVKFQDLYGFTVEGNVDDVN+LNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIA K     S+ 
Subjt:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF

Query:  PSSL
         +++
Subjt:  PSSL
A0A6J1I0U6 growth hormone-regulated TBC protein 1-like4.7e-4183.65Show/hide
Query:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF
        M+GTQSKRDI LELQAQIP+LRPSIH RRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEA+KGANWYLEPSVSEGIA K     S+ 
Subjt:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSF

Query:  PSSL
         +++
Subjt:  PSSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G07890.1 Ypt/Rab-GAP domain of gyp1p superfamily protein2.0e-3980Show/hide
Query:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPS---VSEGIAGK
        M+G QS+RD+ +ELQ+QIPILRPSIH RRANI VKFQDLYGFTVEGNVDDVNVLNEVREKVR QGRVWWALEASKGANWYL+P    + +GIA K
Subjt:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPS---VSEGIAGK
AT3G07890.2 Ypt/Rab-GAP domain of gyp1p superfamily protein2.0e-3980Show/hide
Query:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPS---VSEGIAGK
        M+G QS+RD+ +ELQ+QIPILRPSIH RRANI VKFQDLYGFTVEGNVDDVNVLNEVREKVR QGRVWWALEASKGANWYL+P    + +GIA K
Subjt:  MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPS---VSEGIAGK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGAACTCAAAGCAAAAGAGATATTCCTCTAGAATTGCAAGCTCAGATTCCAATTCTAAGGCCAAGCATCCACACAAGACGGGCTAATATTACAGTTAAGTTTCA
AGATCTATATGGGTTCACAGTCGAAGGCAATGTGGACGACGTTAACGTGTTGAATGAAGTGAGGGAAAAGGTGAGGCAACAGGGTCGAGTTTGGTGGGCATTGGAGGCCA
GCAAAGGCGCTAATTGGTACTTGGAACCCTCTGTTTCTGAAGGGATCGCCGGAAAGGGAGGAGGAGCCTCCTCCTCCTTTCCCTCATCGTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGGAACTCAAAGCAAAAGAGATATTCCTCTAGAATTGCAAGCTCAGATTCCAATTCTAAGGCCAAGCATCCACACAAGACGGGCTAATATTACAGTTAAGTTTCA
AGATCTATATGGGTTCACAGTCGAAGGCAATGTGGACGACGTTAACGTGTTGAATGAAGTGAGGGAAAAGGTGAGGCAACAGGGTCGAGTTTGGTGGGCATTGGAGGCCA
GCAAAGGCGCTAATTGGTACTTGGAACCCTCTGTTTCTGAAGGGATCGCCGGAAAGGGAGGAGGAGCCTCCTCCTCCTTTCCCTCATCGTTATAA
Protein sequenceShow/hide protein sequence
MYGTQSKRDIPLELQAQIPILRPSIHTRRANITVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRVWWALEASKGANWYLEPSVSEGIAGKGGGASSSFPSSL